Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00785 ATGGGGACAGGAGAAGATGGTACACCATCGAAAAATTCGAAACCGGTATCTTCGTCTCAGGAAATACCAACAACTCCATATCCTGATTGGTCAAGCTCGATGCAGGCTTATTATGGTGCTGGTGCTACACCACCTCCATTTTTTGCATCGACTGTAGCTTCTCCAACTCCTCACCCCTATTTGTGGGGAACTCAGCATCCTTTGATTCCACCATATGGCACTCCAGTACCGTATACAGCAATATATCCTCCCGGGGGGATTTATGCTCATCCTAGTATGGCAATGACTCCTGGCACCGTTCTTACAAATACGGAGTTGGAAGGGAAGTCTACAGAGGGAAAAGACAGGGCTTTGGCAAAGAAAGCGGTAGGAAATGTGGGATCATCTGGTGGCAAAGCAGGGGAGATTGGTAAGGTGGCCTCGGGTTCAGGAAACGATGGTGCTTCTCAAAGTGCGGATAGTGGCTCGGAGGGTTCATCTGACGGCAGTGACGAGAATCCTAATCAACAGGAATTTACGGCAAATAAAAAGGGTAGCTTTGACCAGATGCTTGCTGATGGAGCAAATGCACAAAGTAGCAGAAAACCTGCTACTAATCTGAATATCGGAATGGATTTATGGAACACGTCTTCTGGCTCTGCAAAAGTCAGATCAAACCCGTCTGCTAGTTCATCCGGTATCATTCCTGCAACGATGATTGGCCGTGAAGGAGCAGTGCCAGACCAATGGATTCAAGATGAACGGGAGCTAAAACGACAGAAGAGGAAGCAGTCAAATAGGGAGTCAGCCCGGAGGTCAAGATTGCGTAAGCAGGCGGAGTGTGAAGAGTTACAAGCAAGAGTGCAGACATTGAGCAATGAGAATCAGACTCTCCGTGATGAACTGCAGAGGATTTCTGAAGAATGCGAGAAGCTCACAGCAGAAAACAGTGACATGAAGGAAGAACTAACTCGGTTGTGCGGACCGGAGGCGGTGGCTAACCTGGAACAAGGGGGCGGTGAAGGGGATAGTTAA 1014 48.42 MGTGEDGTPSKNSKPVSSSQEIPTTPYPDWSSSMQAYYGAGATPPPFFASTVASPTPHPYLWGTQHPLIPPYGTPVPYTAIYPPGGIYAHPSMAMTPGTVLTNTELEGKSTEGKDRALAKKAVGNVGSSGGKAGEIGKVASGSGNDGASQSADSGSEGSSDGSDENPNQQEFTANKKGSFDQMLADGANAQSSRKPATNLNIGMDLWNTSSGSAKVRSNPSASSSGIIPATMIGREGAVPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLSNENQTLRDELQRISEECEKLTAENSDMKEELTRLCGPEAVANLEQGGGEGDS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28923433 28926376 + BLOR15747 Blo05g00785 61219

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00785 337 MobiDBLite consensus disorder prediction 122 272 - -
Blo05g00785 337 PRINTS cAMP response element binding (CREB) protein signature 199 214 - -
Blo05g00785 337 PRINTS cAMP response element binding (CREB) protein signature 246 262 - -
Blo05g00785 337 PRINTS cAMP response element binding (CREB) protein signature 284 301 - -
Blo05g00785 337 PRINTS cAMP response element binding (CREB) protein signature 264 284 - -
Blo05g00785 337 SUPERFAMILY Leucine zipper domain 250 306 IPR046347 GO:0003700|GO:0006355
Blo05g00785 337 Pfam bZIP transcription factor 247 309 IPR004827 GO:0003700|GO:0006355
Blo05g00785 337 MobiDBLite consensus disorder prediction 185 228 - -
Blo05g00785 337 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Blo05g00785 337 Coils Coil 260 315 - -
Blo05g00785 337 CDD bZIP_plant_GBF1 252 302 IPR045314 GO:0003700|GO:0006355
Blo05g00785 337 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 330 IPR044827 GO:0003700|GO:0006355|GO:0043565
Blo05g00785 337 MobiDBLite consensus disorder prediction 1 28 - -
Blo05g00785 337 MobiDBLite consensus disorder prediction 241 256 - -
Blo05g00785 337 Gene3D - 250 304 - -
Blo05g00785 337 SMART brlzneu 247 311 IPR004827 GO:0003700|GO:0006355
Blo05g00785 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 312 IPR004827 GO:0003700|GO:0006355
Blo05g00785 337 MobiDBLite consensus disorder prediction 143 177 - -
Blo05g00785 337 PANTHER G-BOX-BINDING FACTOR 1 1 330 - -
Blo05g00785 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00785 K09060 GBF; plant G-box-binding factor - csv:101217128 478.018
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo05g00785 Blo06g00126 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00901 Blo-Chr3:35019511 Blo05g00785 Blo-Chr5:28923433 6.55E-54 dispersed
Blo05g00785 Blo-Chr5:28923433 Blo16g00453 Blo-Chr16:18062777 9.85E-49 dispersed
Blo07g01347 Blo-Chr7:33618402 Blo05g00785 Blo-Chr5:28923433 1.07E-06 transposed
Blo05g00785 Blo-Chr5:28923433 Blo06g00126 Blo-Chr6:5096307 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g930 . . Bda04g00063 Bda10g00121 . . . . . . . . Car03g00698 Car07g00439 Sed14g1098 Cpe19g00799 Cpe10g00596 Bhi03g01272 Tan03g1960 Cmetu08g0851 . Hepe04g1491 . . Cla01g01889 Cam01g1979 Cec04g1631 Cco04g1697 Clacu01g1999 Cmu01g1870 Cre04g1551 . . Cone6ag1607 Cone9ag1533 Lsi01g00696 . . Cme08g00828 Blo05g00785 Blo06g00126 . . Bpe10g00107 Bpe06g00053 . . . Cmo03g00796 . . . . . . . . . . . . . . . . . . . . . . Csa06g03222 Chy02g00666 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007671 2 3 2 0 2 0 2 1 1 1 1 0 0 1 1 1 1 2 2 0 1 1 1 1 1 1 1 3 1 2 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12429 PF07777 MFMR 1.70E-32 No_clan Blo TF