Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00787 ATGGCGACTGACTTAGATAATTCCTCTACTGCTTCGGGCGAAGCTAGTGTTTCATCATCTGGAAATCAACCGCCACCTCCAAAATCAACCGCTAAGAAAAAGCGAAACCTACCAGGAATGCCAGATCCGGACGCTGAGGTAATTGCTCTGTCTCCTAAGACTCTCATGGCGACGAATCGATTCGTCTGTGAAATTTGCAGCAAAGGTTTTCAAAGGGATCAGAATTTACAGCTGCATCGAAGAGGTCATAATCTCCCATGGAAGCTGAAGCAGCGTTCGAGTAAGGAGGTGAAGAAGAGAGTCTATGTCTGCCCCGAGCCGACCTGTGTCCACCACGATCCGTCTAGAGCTCTAGGCGATCTCACCGGAATAAAGAAGCATTTCTGTAGAAAACACGGAGAGAAGAAGTGGAAATGCGACAAGTGTTCGAAGAAATACGCGGTTCAGTCCGATTGGAAAGCTCATTCCAAAATCTGCGGCACCAGAGAGTATAAATGCGATTGCGGAACCTTGTTTTCCAGGAGGGATAGCTTCATCACGCACAGAGCTTTCTGCGATGCGTTGGCCGAGGAGAGCGCCAGAGCTCAAACTCGTCCTCAACAGCCAACCATGGCGGAGTCTGACCCAAAAGTTCAGCCTCCTGCTATCACTTCGCCATCGCCGCCTTCTTCAGCTCCAGTGCCGGCAGCTCCTCCACAGTCGACCAGTGGTGTCCCGTCTGTTTTGCCGATTCAGGGTCAAGAGCTGCCCGAAAATCCCCCGCCAATTATTGAAGAAGTACAGACCGGAACAGGATTAAACGGGAGCTGTAGTAGCAGTACAAGCCCGAGCAGCCATAGCTGCTCGAGCAGTAGTGTATTTGCAAGCTTATTTGCTTCCTCAAATGCAGCAGTGAACTTACCTCCTCAGCAACCCCCTGCCTTCACTGACCTAATCCGAGCCATGGGAAGGTCAGATCGCCCAGCTGAGCTCGCCCTTTCTTCACCAACTGAACCCATTTCTCTCTGCCTCTCAACCACCCATCACAGGCCGTCAATTTTTGGGGCTGACGGCCAATACCCACCTCCTCCGCAGCCGCCGCCCATGTCAGCCACAGCCCTTCTTCAGAAAGCTGCTCAAATGGGGGCTGTAGTCACTAATGGATCATTGCTTCGAGGGTTTGGCTTAGTCACCTCTACTTCTTCCCCTACGCAGCAAGAGAGCCTGCAATGGAGTCAGAGGCAAGTGGAGCTGGATTCTGCAGGGCTCGGCCTGGGACTTCCTTATGATGGAAGCTCTGGATTGAAGGAGCTGATGATGGGAAATCATTCCATTTTCGGTCCTAAGCAAACTACACTTGATTTTCTGGGTCTTGGAATGGCAGCCGGTGCGAGTCCCAGTGGCAGCCTGTCAGCACTAATCACGTCCATTGGCGGTGGTCTAGACGTTGCAGCTGCTGCCTCCCTCGAATTCTCTGGCAAAGACATGAGTAGAAACTTGTGA 1482 51.89 MATDLDNSSTASGEASVSSSGNQPPPPKSTAKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVKKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAQTRPQQPTMAESDPKVQPPAITSPSPPSSAPVPAAPPQSTSGVPSVLPIQGQELPENPPPIIEEVQTGTGLNGSCSSSTSPSSHSCSSSSVFASLFASSNAAVNLPPQQPPAFTDLIRAMGRSDRPAELALSSPTEPISLCLSTTHHRPSIFGADGQYPPPPQPPPMSATALLQKAAQMGAVVTNGSLLRGFGLVTSTSSPTQQESLQWSQRQVELDSAGLGLGLPYDGSSGLKELMMGNHSIFGPKQTTLDFLGLGMAAGASPSGSLSALITSIGGGLDVAAAASLEFSGKDMSRNL 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28977306 28979378 - BLOR15749 Blo05g00787 61221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00787 493 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Blo05g00787 493 MobiDBLite consensus disorder prediction 214 233 - -
Blo05g00787 493 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Blo05g00787 493 MobiDBLite consensus disorder prediction 1 45 - -
Blo05g00787 493 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Blo05g00787 493 SMART c2h2final6 102 132 IPR013087 -
Blo05g00787 493 SMART c2h2final6 61 83 IPR013087 -
Blo05g00787 493 SMART c2h2final6 137 157 IPR013087 -
Blo05g00787 493 MobiDBLite consensus disorder prediction 193 279 - -
Blo05g00787 493 PANTHER ZINC FINGER PROTEIN GAI-ASSOCIATED FACTOR 1 1 491 - -
Blo05g00787 493 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 491 - -
Blo05g00787 493 Gene3D Classic Zinc Finger 115 195 - -
Blo05g00787 493 MobiDBLite consensus disorder prediction 262 279 - -
Blo05g00787 493 Gene3D Classic Zinc Finger 41 107 - -
Blo05g00787 493 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00787 Blo06g00128 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00053 Blo-Chr5:512809 Blo05g00787 Blo-Chr5:28977306 9.87E-116 dispersed
Blo05g00787 Blo-Chr5:28977306 Blo12g00911 Blo-Chr12:27295851 6.92E-154 dispersed
Blo11g00867 Blo-Chr11:16496454 Blo05g00787 Blo-Chr5:28977306 4.94E-94 dispersed
Blo05g00787 Blo-Chr5:28977306 Blo06g00128 Blo-Chr6:5176019 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12430 None None None None Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00787 K25869 - tcc:18610967 681.404