Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo05g00787 | ATGGCGACTGACTTAGATAATTCCTCTACTGCTTCGGGCGAAGCTAGTGTTTCATCATCTGGAAATCAACCGCCACCTCCAAAATCAACCGCTAAGAAAAAGCGAAACCTACCAGGAATGCCAGATCCGGACGCTGAGGTAATTGCTCTGTCTCCTAAGACTCTCATGGCGACGAATCGATTCGTCTGTGAAATTTGCAGCAAAGGTTTTCAAAGGGATCAGAATTTACAGCTGCATCGAAGAGGTCATAATCTCCCATGGAAGCTGAAGCAGCGTTCGAGTAAGGAGGTGAAGAAGAGAGTCTATGTCTGCCCCGAGCCGACCTGTGTCCACCACGATCCGTCTAGAGCTCTAGGCGATCTCACCGGAATAAAGAAGCATTTCTGTAGAAAACACGGAGAGAAGAAGTGGAAATGCGACAAGTGTTCGAAGAAATACGCGGTTCAGTCCGATTGGAAAGCTCATTCCAAAATCTGCGGCACCAGAGAGTATAAATGCGATTGCGGAACCTTGTTTTCCAGGAGGGATAGCTTCATCACGCACAGAGCTTTCTGCGATGCGTTGGCCGAGGAGAGCGCCAGAGCTCAAACTCGTCCTCAACAGCCAACCATGGCGGAGTCTGACCCAAAAGTTCAGCCTCCTGCTATCACTTCGCCATCGCCGCCTTCTTCAGCTCCAGTGCCGGCAGCTCCTCCACAGTCGACCAGTGGTGTCCCGTCTGTTTTGCCGATTCAGGGTCAAGAGCTGCCCGAAAATCCCCCGCCAATTATTGAAGAAGTACAGACCGGAACAGGATTAAACGGGAGCTGTAGTAGCAGTACAAGCCCGAGCAGCCATAGCTGCTCGAGCAGTAGTGTATTTGCAAGCTTATTTGCTTCCTCAAATGCAGCAGTGAACTTACCTCCTCAGCAACCCCCTGCCTTCACTGACCTAATCCGAGCCATGGGAAGGTCAGATCGCCCAGCTGAGCTCGCCCTTTCTTCACCAACTGAACCCATTTCTCTCTGCCTCTCAACCACCCATCACAGGCCGTCAATTTTTGGGGCTGACGGCCAATACCCACCTCCTCCGCAGCCGCCGCCCATGTCAGCCACAGCCCTTCTTCAGAAAGCTGCTCAAATGGGGGCTGTAGTCACTAATGGATCATTGCTTCGAGGGTTTGGCTTAGTCACCTCTACTTCTTCCCCTACGCAGCAAGAGAGCCTGCAATGGAGTCAGAGGCAAGTGGAGCTGGATTCTGCAGGGCTCGGCCTGGGACTTCCTTATGATGGAAGCTCTGGATTGAAGGAGCTGATGATGGGAAATCATTCCATTTTCGGTCCTAAGCAAACTACACTTGATTTTCTGGGTCTTGGAATGGCAGCCGGTGCGAGTCCCAGTGGCAGCCTGTCAGCACTAATCACGTCCATTGGCGGTGGTCTAGACGTTGCAGCTGCTGCCTCCCTCGAATTCTCTGGCAAAGACATGAGTAGAAACTTGTGA | 1482 | 51.89 | MATDLDNSSTASGEASVSSSGNQPPPPKSTAKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVKKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAQTRPQQPTMAESDPKVQPPAITSPSPPSSAPVPAAPPQSTSGVPSVLPIQGQELPENPPPIIEEVQTGTGLNGSCSSSTSPSSHSCSSSSVFASLFASSNAAVNLPPQQPPAFTDLIRAMGRSDRPAELALSSPTEPISLCLSTTHHRPSIFGADGQYPPPPQPPPMSATALLQKAAQMGAVVTNGSLLRGFGLVTSTSSPTQQESLQWSQRQVELDSAGLGLGLPYDGSSGLKELMMGNHSIFGPKQTTLDFLGLGMAAGASPSGSLSALITSIGGGLDVAAAASLEFSGKDMSRNL | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 28977306 | 28979378 | - | BLOR15749 | Blo05g00787 | 61221 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo05g00787 | 493 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 61 | 83 | IPR013087 | - | |
Blo05g00787 | 493 | MobiDBLite | consensus disorder prediction | 214 | 233 | - | - | |
Blo05g00787 | 493 | SUPERFAMILY | beta-beta-alpha zinc fingers | 60 | 157 | IPR036236 | - | |
Blo05g00787 | 493 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Blo05g00787 | 493 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 63 | 83 | IPR013087 | - | |
Blo05g00787 | 493 | SMART | c2h2final6 | 102 | 132 | IPR013087 | - | |
Blo05g00787 | 493 | SMART | c2h2final6 | 61 | 83 | IPR013087 | - | |
Blo05g00787 | 493 | SMART | c2h2final6 | 137 | 157 | IPR013087 | - | |
Blo05g00787 | 493 | MobiDBLite | consensus disorder prediction | 193 | 279 | - | - | |
Blo05g00787 | 493 | PANTHER | ZINC FINGER PROTEIN GAI-ASSOCIATED FACTOR 1 | 1 | 491 | - | - | |
Blo05g00787 | 493 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 1 | 491 | - | - | |
Blo05g00787 | 493 | Gene3D | Classic Zinc Finger | 115 | 195 | - | - | |
Blo05g00787 | 493 | MobiDBLite | consensus disorder prediction | 262 | 279 | - | - | |
Blo05g00787 | 493 | Gene3D | Classic Zinc Finger | 41 | 107 | - | - | |
Blo05g00787 | 493 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo05g00787 | Blo06g00128 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo05g00053 | Blo-Chr5:512809 | Blo05g00787 | Blo-Chr5:28977306 | 9.87E-116 | dispersed | |
Blo05g00787 | Blo-Chr5:28977306 | Blo12g00911 | Blo-Chr12:27295851 | 6.92E-154 | dispersed | |
Blo11g00867 | Blo-Chr11:16496454 | Blo05g00787 | Blo-Chr5:28977306 | 4.94E-94 | dispersed | |
Blo05g00787 | Blo-Chr5:28977306 | Blo06g00128 | Blo-Chr6:5176019 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12430 | None | None | None | None | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo05g00787 | K25869 | - | tcc:18610967 | 681.404 |