Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00794 ATGGCTGACATGTGCAGTGACAGTGGAAATCTGATGGCAATTGCTCAGCAAGTGATGAAGCAGAAACAACGCCAGCAGGAGCAACAGCAACAACCGCAACAGCCGCCACACCAACTTACTGGCAGCCTCAGTCCGTTTTCTCTTGGTCCTTGGAATAATTCTCAACAAACTGCGATTTCTAGCTCTCCGGCTATGGATTTTGGCCTCTCCGGCCCCGGATTTTCAGACCCGTTCCAGGATGCCGGAGGAGGTGAAAGCGGAGAAACTGGGTTTCAGTTCCCGAACCTGGAGCACCACTCTACTGGTTTTAGGTTCTCGGATTTTGACGGTGGCGCCAGTGGTGAGTTTGATTCCGACGAGTGGATGGATAGCTTAATGGCCGGTGGAGGTTCGTCGGATGCCTCCAACTTGCCGTCCGGCTGTAACGAGTGGCAAAGTAATGCTGAGTTTTGTCTCTACAACGGAAATCCATTTTCTTCCGGCCTGAGTCGTCTAGGCATCGCTTGCTCTCCACCGTCCGATCTCAATCGAGTCATTTTCTATGATAATCAAAAGAATCTCAGCCCTCTGCAACCCTTGGTTTCCGCCTGGGCCCCACCACCTCCGCCTCTATCTCCGCCGTCTCCGTTACAGGACAGTAAAGAAGTCAATCCACCGGTGTCTAGAGTTCAAAAGGACGACACGGCTGACAGATCGTCAAGCTCGCCGGAATCTGAATCAACGTCAACACTCCTCTTAGCCCTGTTGGAGTGCGCTCGATTATCTGAATCGGAACCCGATAGAGCGGTGAAAATGCTGATTCAGCTGAGGGAATCATTGTCAGAGAAAGGAGATCCGACTGAGAGGGTTGCGTTTTATTTCTGCGAAGCTCTGTGTAGTAGATTATCACTGCGATCGGAAACCAGCTTAGCTCTATGCGCGACAACGACGGAGGAGTTTTCTCTCTCTTACAAAGCTCTCAACGATGCTTGTCCGTATTCGAAATTTGCTCATTTGACTGCAAATCAAGCGATTCTAGAAAGTACAGAAAGAGCGAGCAAGATTCACATAATAGATTTCGGAATTGTTCACGGAGTTCAATGGGCGGCACTTTTACAAGCTATGGCGACTCGGTCTTCTGGAAAACCAGGTAGAATTAGAATTTCTGGCATACCTGCTGCGGCACTGGGGAAATCACCAGATGCTTCGTTGATTGCCACTGGTAATCGGCTGAGTGAGTTTGCAAAGCTTCTCGAATTGAACTTCGAATTCGATCCAATCCTTACTCCAATTGAGGAGTTGAGTGAATTGAGCTTTCGTGTCGAGTCCGATGAGGTTCTTGCTGTCAATTTCATGCTGCAATTGTACATCCTATTGGATGAAAGCCCGGCTGGGGTTCAGAATGCTCTCCGGTTGGCAAAATTGATGAACCCTAAGATCGTGACTCTGGGAGAATACGAAGCAAGCTTGAATCAGGTTGGATTTGTGAAACGATTCAAGAACGCACTGAAATACTATTCAGCCTTGTTTGAGTCTCTAGAGCCAAACATGAACCGTGAATCGCCAGAGAGACTACAGCTGGAAAAGCATCTTCTCGGCCGTCGAATCGCAGGTGTAGTTGGGCCAGAAAGTTCAGGCGCCAAAAGAGAGCGGATGGACGACAAGGAGCGGTGGAAAATGCTAATGGAAAGCTCGGGTTTTTCAACCGGATCGATCAGCCGTTACGCAGTCAGTCAGGCACAGATCCTTCTGTGGAACTACAACTACAGCTCTTTGTATTCTTTGATAGAATCACCTCCTGGGTTTCTCTCTCTTGCATGGAATGAGGTTCCTCTTCTCACTGTTTCTTCATGGCGGTAA 1839 48.83 MADMCSDSGNLMAIAQQVMKQKQRQQEQQQQPQQPPHQLTGSLSPFSLGPWNNSQQTAISSSPAMDFGLSGPGFSDPFQDAGGGESGETGFQFPNLEHHSTGFRFSDFDGGASGEFDSDEWMDSLMAGGGSSDASNLPSGCNEWQSNAEFCLYNGNPFSSGLSRLGIACSPPSDLNRVIFYDNQKNLSPLQPLVSAWAPPPPPLSPPSPLQDSKEVNPPVSRVQKDDTADRSSSSPESESTSTLLLALLECARLSESEPDRAVKMLIQLRESLSEKGDPTERVAFYFCEALCSRLSLRSETSLALCATTTEEFSLSYKALNDACPYSKFAHLTANQAILESTERASKIHIIDFGIVHGVQWAALLQAMATRSSGKPGRIRISGIPAAALGKSPDASLIATGNRLSEFAKLLELNFEFDPILTPIEELSELSFRVESDEVLAVNFMLQLYILLDESPAGVQNALRLAKLMNPKIVTLGEYEASLNQVGFVKRFKNALKYYSALFESLEPNMNRESPERLQLEKHLLGRRIAGVVGPESSGAKRERMDDKERWKMLMESSGFSTGSISRYAVSQAQILLWNYNYSSLYSLIESPPGFLSLAWNEVPLLTVSSWR 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29199863 29201701 + BLOR15756 Blo05g00794 61228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00794 612 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 245 611 - -
Blo05g00794 612 MobiDBLite consensus disorder prediction 194 213 - -
Blo05g00794 612 MobiDBLite consensus disorder prediction 1 95 - -
Blo05g00794 612 MobiDBLite consensus disorder prediction 10 64 - -
Blo05g00794 612 Pfam GRAS domain family 247 612 IPR005202 -
Blo05g00794 612 MobiDBLite consensus disorder prediction 192 239 - -
Blo05g00794 612 ProSiteProfiles GRAS family profile. 235 612 IPR005202 -
Blo05g00794 612 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 245 611 IPR005202 -
Blo05g00794 612 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00794 Blo-Chr5:29199863 Blo10g00862 Blo-Chr10:27163983 1.01E-61 dispersed
Blo05g00794 Blo-Chr5:29199863 Blo13g01002 Blo-Chr13:32411281 2.76E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12431 PF03514 GRAS 4.20E-102 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00794 - - zju:107424599 799.275