Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00806 ATGAAAGAAAGGGCGAGAGAGACGGAGAGGGAACGAAGAGAGGGAGATGGGGCAAGGCGACGCGAGTGGGCGGAGACGACGATCCCCGGCGACGGCGGCAGGGGCTCGGGCGAGCCCGGAGCTGGACTCCTTCGCGGCGTGAACAACGTCTGTTTTCCGGCGAGTTGCAGGATTAGGGCTCGGGAATTGGAATCCCGTCGATATCACCAATCTCTGATATGTGTTTGTGGGGCATGTTTCTTCTCGGGTCTGCTTGGTTTCAATTTCAGTTCTGAAAAGCTGAAAGGCGTATATCGATCCTACAATGATTTCAATACCCTTTTCCAGTCCCTTTCGAGTTTCTTGGAGAATCTCCGAAGCCAAACTGGAGCCAGTCTCAGGCCGTGTTTCTTCACTAGAATTCCTGGTTCTTTCTATGGCCGGCTTTTCCCGACCCATAGCTTGCACTTCGTCCACTCCTCCTACAGCCTTCAATGGCTTTCACAGGTTCCAAGAGGGATAGAAGGCAACCAAGGAAACATATACATGTCCAAAACAAGCCCACACAGCATTCTCAAAGCTTACTCCAACCAATTTCAGAAAGATTTCTCAACATTCTTGAAGTGTCGAGGAGAAGAAGTCATTAATGGCTGCTGCATGATTCTCACATTTCTAGAAGTGAAACTCGAGATCGTGAAAGAAGGATCGTTTTCCATTAATCGACTCGAAGTTTCAAGCATAAGTCGAAATGGATTATCAAAATTATTCTATCATAGGTATTACGATGAGGAAGATCAAATAAGCTTATCGAACGAGTTTGTCGAAAGTGGTTCTTATGTCGAGAAGTATATGAGGGCTGTGGCCGAACCTTTGCTTGTTAATCATTTTGGGGAAGCCATTATAGATGATGTGTTTTGCAGATACAGAAGGATTGTTGCAGAGTGCATGAAGAAGGAGAAGCCTGAGTTTATAAACATCACTGTTTCTTTGACCAGAAAAGAGATGGCCTAA 990 46.26 MKERARETERERREGDGARRREWAETTIPGDGGRGSGEPGAGLLRGVNNVCFPASCRIRARELESRRYHQSLICVCGACFFSGLLGFNFSSEKLKGVYRSYNDFNTLFQSLSSFLENLRSQTGASLRPCFFTRIPGSFYGRLFPTHSLHFVHSSYSLQWLSQVPRGIEGNQGNIYMSKTSPHSILKAYSNQFQKDFSTFLKCRGEEVINGCCMILTFLEVKLEIVKEGSFSINRLEVSSISRNGLSKLFYHRYYDEEDQISLSNEFVESGSYVEKYMRAVAEPLLVNHFGEAIIDDVFCRYRRIVAECMKKEKPEFINITVSLTRKEMA 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29457276 29461531 - BLOR15768 Blo05g00806 61240

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00806 329 PANTHER OS05G0102000 PROTEIN 219 318 - -
Blo05g00806 329 PANTHER OS05G0102000 PROTEIN 96 218 - -
Blo05g00806 329 Gene3D - 162 187 IPR042086 -
Blo05g00806 329 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 219 318 IPR005299 GO:0008168
Blo05g00806 329 Gene3D - 242 312 IPR042086 -
Blo05g00806 329 Gene3D Vaccinia Virus protein VP39 219 313 IPR029063 -
Blo05g00806 329 MobiDBLite consensus disorder prediction 1 27 - -
Blo05g00806 329 Gene3D Vaccinia Virus protein VP39 101 218 IPR029063 -
Blo05g00806 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 326 IPR029063 -
Blo05g00806 329 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 96 218 IPR005299 GO:0008168
Blo05g00806 329 MobiDBLite consensus disorder prediction 1 39 - -
Blo05g00806 329 Pfam SAM dependent carboxyl methyltransferase 219 325 IPR005299 GO:0008168
Blo05g00806 329 Pfam SAM dependent carboxyl methyltransferase 101 218 IPR005299 GO:0008168
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00806 K21483 SAMT; salicylate 1-O-methyltransferase [EC:2.1.1.274] - zju:107424658 253.832
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00806 Blo-Chr5:29457276 Blo12g00902 Blo-Chr12:27226650 5.07E-46 dispersed
Blo05g00805 Blo-Chr5:29442755 Blo05g00806 Blo-Chr5:29457276 5.51E-124 tandem
Blo05g00806 Blo-Chr5:29457276 Blo05g00807 Blo-Chr5:29566164 8.11E-129 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1016 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi01g00659 . . . Blo05g00806 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000124 5 1 6 7 2 6 0 6 4 6 7 6 5 9 9 7 6 2 4 7 8 15 10 11 14 4 9 21 9 12 218
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo05g00806 Blo_Chr05 FPKM 1.746334 1.540324 3.783652 3.406195 2.582847 3.054224 2.357294 9.645563 9.100893 9.286858