Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00807 ATGGACGTAGTTAAAGTGCTACACATGAAAGGAGGAAAGGGAGATACCAGCTATGCTACCAACTCTTCAATGCAGAAGAAGATTATTGCAATGACAAAGCCTGTGAGAGAAGAAGCCATAGCCAAGCTCTGCAACAACACAATGACGTGCTTAAACATTGCAGACTTGGGCTGTTCTTCTGGTTCCAACACACTCTTTGTGGCGTCCGAGGTTATCCAAATAATGCACAATCTCAAATCAGAGGCGGAAAGAAAATCCATCGAATTTCGTGTCTTCTTGAACGATCTTCCTACAAATGATTTCAATACCCTTTTCCAGTCCCTTCCGAGTTTCTTGGAGAATCTCCGGAGCCAAACCGGAGCCAGTCTGGGGCCGTGTTTCTTCACCGGAGTTCCGGGTTCTTTCTATGGCCGGCTTTTCCCAACCAATAGCCTGCACTTTGTCCACTCCTCTTACAGCCTCCATTGGCTTTCACAGGTTCCAAGAGGGATAGAGGACAACAAAGGAAACATATGCATGTCCAAAACAAGTCCACCCAGCGTTCTCAAAGCTTACTACAACCAATTTCAGAAAGATTTCTCAACATTCTTGAAATGTCGAGGAGTAGAAGTCATTAATGGCTGCTGCATGATTCTCACATTTCTCGGCCGAAGAAGTGAAACCCCATCTAGCAAAGACAATTGTCATATTTGGGATCTCGTGGCCACGACCCTCAACGAAATGGTTGCTGACGGAATCATCAACGAAGACGAAGTCAATGACTTCAACGTTCCGATATACACGCCATCCTCGTCTGAAGTGAAACTCGAGATAGTAAAAGAAGGATCGTTTGCCGTTAATCGACTCGAAGTTTCAAGCATAAGTTGGAATGGGTACTACAATGAGGAAGATCAAATATGCATATCGAACGACTTTTTTGAAAGTGGTTCTTACATTGAGAAGTATATGAGGGCCGTGGCCGACCCTTTGCTTATTAGTCATTTCAAGGAAGCCATTATAGATGAGGTGTTTTGCAGATTCAGAAGGATTGTTGCAGAGTGCATGAAGAAGGAGAAGCCTGAGTTCATAAACATCACTGTTTCTTTGACCAGAAAAGAGATGGCCTAA 1107 43.99 MDVVKVLHMKGGKGDTSYATNSSMQKKIIAMTKPVREEAIAKLCNNTMTCLNIADLGCSSGSNTLFVASEVIQIMHNLKSEAERKSIEFRVFLNDLPTNDFNTLFQSLPSFLENLRSQTGASLGPCFFTGVPGSFYGRLFPTNSLHFVHSSYSLHWLSQVPRGIEDNKGNICMSKTSPPSVLKAYYNQFQKDFSTFLKCRGVEVINGCCMILTFLGRRSETPSSKDNCHIWDLVATTLNEMVADGIINEDEVNDFNVPIYTPSSSEVKLEIVKEGSFAVNRLEVSSISWNGYYNEEDQICISNDFFESGSYIEKYMRAVADPLLISHFKEAIIDEVFCRFRRIVAECMKKEKPEFINITVSLTRKEMA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29566164 29567982 - BLOR15769 Blo05g00807 61241

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00807 368 Pfam SAM dependent carboxyl methyltransferase 39 364 IPR005299 GO:0008168
Blo05g00807 368 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 364 - -
Blo05g00807 368 Gene3D - 6 351 IPR042086 -
Blo05g00807 368 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 364 IPR005299 GO:0008168
Blo05g00807 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 365 IPR029063 -
Blo05g00807 368 Gene3D Vaccinia Virus protein VP39 21 352 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00807 K21483 SAMT; salicylate 1-O-methyltransferase [EC:2.1.1.274] - tcc:18610878 462.611
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00516 Blo-Chr4:4404930 Blo05g00807 Blo-Chr5:29566164 2.18E-98 dispersed
Blo05g00804 Blo-Chr5:29434105 Blo05g00807 Blo-Chr5:29566164 0 dispersed
Blo05g00805 Blo-Chr5:29442755 Blo05g00807 Blo-Chr5:29566164 0 dispersed
Blo05g00807 Blo-Chr5:29566164 Blo12g00902 Blo-Chr12:27226650 2.13E-99 dispersed
Blo05g00806 Blo-Chr5:29457276 Blo05g00807 Blo-Chr5:29566164 8.11E-129 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1019 . . . . . . . . . . Cma03g00730 . . . . . . . . . . . . . . . . . . . . . . . . Lsi01g00658 . . Cme08g00869 Blo05g00807 . . . . . . . . Cmo03g00758 Cmo07g00472 . . . . . . . . . . . . . . . . . . . . . . Chy02g00625 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000124 5 1 6 7 2 6 0 6 4 6 7 6 5 9 9 7 6 2 4 7 8 15 10 11 14 4 9 21 9 12 218