Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00816 ATGCCGCAGGTTAGGTCGCGAAACATCAAGCGAACGTCGTCAACTTCATATGCATCCACCATAACAACAATGGTGTTCGTTGCCCTCTGTGTTTTTGGCCTATGGATGCTCAACTCAAATTCAGTTCTTCCTACTCGGGCCACCACTCATTCCATTTCCGATCCTTCTTCTTCTTCTTCCTCGTCGTCGTCTAGCTCCGTCGCCACTACCTCGCCATTCTTAGAAAACGAAAATGCGCCACCTTTCGAAGACAATCCCGGGGATCTTCCAGATGATGCTATAAGCTCCGACGATAAAGCGGACGGAGAACAGTCAACACCGGCCACAAACGAGCTCCATCAGCGGGAATTAATAACCGAAGAAAAACAGAGGGATGGTGAGGAAAATGAAAACAATTCGATTCGAAATGAACAGGTTTCTGATTCGGAGGAAAAAACAGAGGATACGGAGAATAGAGAAAGCGTCGAGAACGGAAACTCCGAGTCTGAAACCCAAGAAACAGCAAACGAAGAATCTGAAACAAAAGAAGCCGTCGACGATCAAAAACAGACAAGTGATCAGGAAGAGAATTCAGAGGATGTTGAAAAGGATGAAGATGGAGAAACGCAAACGGAGGAAGATCAGATAAAACAACTGGGTGACAAGCTGGAATCAGAAATTCAAGAAAACGCACAGGAATCAGAAAACATTCAGCAACTGAAAGAAGATCAAGAAAACCCTAACTCAAACACCGACGAGGAACCAACAAGAGAAACCCAAACCTTCAAAGAATCAGAAGATCAGACTCAGCAAGATGAACGATCCGAAACGCAATCGGAGGGCGATAACTCGTTCCAAAACCCAGGGATCCCGAAGGAATCGAAGGAGTCGGAGCAGGGATGGTCGACTCAGGCGGGCGAATCGGAAGACGAGAAGGAGAGAAGGAAGGAAGAGTCAGACGGTCAGGGAAGTATGTACGGGTACACGTGGCAACTCTGTAACGTGACAGCTGGCTTTGATTACATCCCCTGTCTAGACAACGAGAAGGCGCTGAAGAAAGTGCACAAGACTGGTCACTACGAACACAGAGAAAGACACTGCCCAGAGGAGGGGCCCACTTGCCTGGTCCCACTGCCAGATGGATACAAAAGGCCTATCCCATGGCCCACAAGTAGGAGCAAGATTTGGTATAAGAACGTGCCGCACACAAAGCTGGCGGAGGTGAAGGGCCATCAAAACTGGGTCAAAGTGACCGGAGAATACTTGAATTTTCCCGGGGGTGGGACGCAGTTCATCCACGGGGCTCTTCACTATATCGATTTCATCCAACAGTCAGCGCCTAAAATTCGATGGGGACAACATACGAGGGTGATTCTAGATGTCGGCTGCGGAGTTGCCAGCTTCGGAGGTTATCTTTTCGACAGAAACGTTCTTGCTATGTCTTTTGCTCCTAAAGACGAGCACGAAGCTCAAGTTCAGTTCGCCCTCGAACGGGGAATTCCGGCCATTTCTGCAGTCATGGGTTCGCAGCGACTGCCATTTCCGAGCGGCGTGTTTGATCTTGTTCATTGTGCAAGGTGCAGAGTGCCTTGGCATGCAGAAGGAGGATTGCTTCTGCTGGAACTGAATCGTGTTCTCCGCCCTGGGGGCTTCTTTGTTTGGTCTGCAACTCCTGTTTATCAGAAGCTGCAAGAAGACGTTGAGATTTGGAAGGCCATGTCCTCACTGACGGCCTCCATGTGTTGGGAGCTCTTTACCATCAAGAAAGACAGGCTGAATGGCGTCGGAGCCGCCATTTATCGAAAACCCAGCTCAAACTATTGCTATGATCAAAGACAGCAAAACCGGCCGCCGATGTGCGAATCGGACGACGATCCGAACGCAGCTTGGTACGTGCCTCTGCAAGCGTGTATGCACAGAGTACCAGTTGACAAGACAAAAAGAGGTAGCAGGTGGCCGGAAGACTGGCCCCGCCGGTTGCAGATACCTCCGTACTGGCTAAATAGCTCCCAGATGGGAATCTACGGCAGACCAGCTCCTCAAGATTTTGTTTCAGATTATGAACACTGGAAAGAAGTAGTGAATAAAACGTACATCGATGGACTGGGAATCAGTTTGTCGGATGTCAGGAATGTTATGGACATGAGATCAGTTTATGGAGGGTATCTTCTCCTTCTCTCCTTCCTCGTCTCTCTTCTTCTTCTTCTTCTTTTATCACTTGTTCCTCTTTCTTGCAGGTTTGCTGCTGCTTTGAAAGATCTCTCTGTCTGGGTTGTGAATGTCGTAAACGTGGATTCTCCGGATACTCTTCCGATAATCTACGAGCGTGGCCTTTTCGGAATATACCATGATTGGTGTGAATCTTTCAGCACCTACCCAAGAACTTACGATCTTCTTCACGCTGATCATCTCTTCTCCAAGTTGAAAAAAAGGTGCAAACTTGGCCCGGTGATGGCGGAAGTCGATAGAATAGTCAGACCAGGAGGTAAGTTGATTGTCCGGGATGAATCAAGCGCAATTGAAGAGGTGGAAAACTTCCTCAAGTCTCTTCGCTGGGAAGTTCACTTAACTTTCTCCAAAGATCAAGAAGGGATGCTAAGTGCCCAGAAAGGAGACTGGCGACCGGAGACATACTCAGATTCTTAG 2625 48.42 MPQVRSRNIKRTSSTSYASTITTMVFVALCVFGLWMLNSNSVLPTRATTHSISDPSSSSSSSSSSSVATTSPFLENENAPPFEDNPGDLPDDAISSDDKADGEQSTPATNELHQRELITEEKQRDGEENENNSIRNEQVSDSEEKTEDTENRESVENGNSESETQETANEESETKEAVDDQKQTSDQEENSEDVEKDEDGETQTEEDQIKQLGDKLESEIQENAQESENIQQLKEDQENPNSNTDEEPTRETQTFKESEDQTQQDERSETQSEGDNSFQNPGIPKESKESEQGWSTQAGESEDEKERRKEESDGQGSMYGYTWQLCNVTAGFDYIPCLDNEKALKKVHKTGHYEHRERHCPEEGPTCLVPLPDGYKRPIPWPTSRSKIWYKNVPHTKLAEVKGHQNWVKVTGEYLNFPGGGTQFIHGALHYIDFIQQSAPKIRWGQHTRVILDVGCGVASFGGYLFDRNVLAMSFAPKDEHEAQVQFALERGIPAISAVMGSQRLPFPSGVFDLVHCARCRVPWHAEGGLLLLELNRVLRPGGFFVWSATPVYQKLQEDVEIWKAMSSLTASMCWELFTIKKDRLNGVGAAIYRKPSSNYCYDQRQQNRPPMCESDDDPNAAWYVPLQACMHRVPVDKTKRGSRWPEDWPRRLQIPPYWLNSSQMGIYGRPAPQDFVSDYEHWKEVVNKTYIDGLGISLSDVRNVMDMRSVYGGYLLLLSFLVSLLLLLLLSLVPLSCRFAAALKDLSVWVVNVVNVDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKLKKRCKLGPVMAEVDRIVRPGGKLIVRDESSAIEEVENFLKSLRWEVHLTFSKDQEGMLSAQKGDWRPETYSDS 874
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29801963 29805061 + BLOR15778 Blo05g00816 61250

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00816 874 Gene3D Vaccinia Virus protein VP39 420 580 IPR029063 -
Blo05g00816 874 PANTHER METHYLTRANSFERASE PMT27-RELATED 6 715 - -
Blo05g00816 874 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 356 578 IPR029063 -
Blo05g00816 874 MobiDBLite consensus disorder prediction 168 189 - -
Blo05g00816 874 MobiDBLite consensus disorder prediction 229 272 - -
Blo05g00816 874 Coils Coil 209 236 - -
Blo05g00816 874 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 715 IPR004159 GO:0008168
Blo05g00816 874 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 740 872 IPR004159 GO:0008168
Blo05g00816 874 Coils Coil 110 137 - -
Blo05g00816 874 MobiDBLite consensus disorder prediction 203 222 - -
Blo05g00816 874 MobiDBLite consensus disorder prediction 298 314 - -
Blo05g00816 874 MobiDBLite consensus disorder prediction 114 159 - -
Blo05g00816 874 MobiDBLite consensus disorder prediction 46 76 - -
Blo05g00816 874 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 739 839 IPR029063 -
Blo05g00816 874 MobiDBLite consensus disorder prediction 46 318 - -
Blo05g00816 874 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 333 715 IPR004159 GO:0008168
Blo05g00816 874 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 739 862 IPR004159 GO:0008168
Blo05g00816 874 PANTHER METHYLTRANSFERASE PMT27-RELATED 740 872 - -
Blo05g00816 874 MobiDBLite consensus disorder prediction 273 297 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00816 - - - cmo:103485101 1119.76
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo05g00816 Blo06g00330 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00816 Blo-Chr5:29801963 Blo16g00431 Blo-Chr16:16990607 0 dispersed
Blo05g00816 Blo-Chr5:29801963 Blo06g00330 Blo-Chr6:19139776 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1064 . . Bda04g00033 Bda10g00167 Bpe15g00369 . Bma09g00097 Bma15g00971 . . Cma03g00706 Cma07g00451 Car03g00647 Car07g00398 Sed14g1170 Cpe19g00838 Cpe10g00647 Bhi03g00898 Tan03g2044 Cmetu04g1166 . Hepe04g1565 . . Cla01g01953 Cam01g2042 Cec04g1700 Cco04g1765 Clacu01g2064 Cmu01g1941 Cre04g1615 . . Cone6ag1660 . Lsi01g00630 . . Cme08g00900 Blo05g00816 Blo06g00330 . . Bpe10g00139 Bpe06g00031 . . . Cmo03g00732 Cmo07g00448 . . . . . . . . . . . . . . . . . . . . . Csa06g03295 Chy02g00601 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000953 3 2 4 3 4 2 4 2 2 3 2 2 4 2 2 4 2 6 4 2 3 2 2 2 2 2 2 5 3 3 85