Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00819 ATGGCGTCGGTTGCTCCAGTTTCTTCATGGATCCCTGAAGATGATATTCTTTTGAAGAACGCTGTCGAGGCAGGAGCTTCATTAGAAGCACTTGCTAAAGGTGCAGTGCATTTCTCTCGGAAATTTACGCTTCAAGAACTTCAAGATCGTTGGCGTTCTCTCTTGTACGACCCAGTTATTTCTGCAGAAGCTTCAGGTCGTATGCTTGAGTTTGAACTATCTGCTCCTAATGATTTGTCCAAGAGCCACCGATTTAAAAACTCAAGAGAAATCACGGCAAAAAGAAAACCAGAAAGCATTCGTAGCCTGTATTATAGAATGAGGAAAAGAATGTGTAATCAAGCTGTTAATCCTTTCGATCGAAATTTTCTTGGTTCGCCAAACTGTACTGCTTGTATTGGAAATGGAGGTGATAGTGAAAGAGTCAGAATGGATGTTGACGATAATTTAATTGATTATGGGAATTGTATGGGGCCACATCCTCATGGCTTTCCAGATATGCCTGTGTTGAAAAGGAGGGAAGACGTTTCAATAGCTGGTTGGGGAAGTGATCAGGATGTCCAAGAGATGCAGGGCGATGTTCAGATTGCAGGGGAAGCAATTGGTTCATCAGACATTTTAGGTTTTGATATTTGTGATCATCCTGATTCGCTTTTGAACATTCCAAATGAAGACGAGATTCTATTTATGGGATTTGATGGCAAAGGTGTGATGGAAGAGGCTGTTGATTCACTTTGGCTGAACTCTCCGACTGTTTACTCAAAAGATACATCAGACGCTGATGAGCATCAAGCCTTAGTTTCTAACAAAGACCATCCTCTTCCTGAAGATTTAAGCACTCCGGTGTTAGTAGATATAACAGATTTGCAGCCAGATTCTGTTCATGGCAGTCATCAAACACTTTGTCATCCTGATGATAATAGGCAATCCTTGACATTTGCACCATCATCCCATTCTCCTCCTAATCAAGGAGAAATGAATTGCATATTAAACAGCGAGGACCCTGAAATCCCATGCAATGATAATATGTTTCCTTCCAAAACTATCAGACCTAGTTTTGTAGATGACATAGATCTATTTTCTTCATCTGTTCTTCCAAAAAATCATGAACTAGAAATGACTCTGACTAGAGAAGACAATCCTAAACAGAAGGGTCTCTTCCCCCATATTATAGAATCAGATATTTTATCAAAATCAAGTCCAAATGGTCGAACAGTTAATCATGAAGTAACAAAGGAAACTCGTGATGGTTACTGTCTTTCTGCTGTGGCCAGACATGTTAACAGTTTCCCTTCCAGTCCTAAGAGTTGCATGGTAGAGCATGGAACTTCAAAGAGTGCCACTTCGAATGCCCTAAAAGAAGAGGATGGTCAATCTGCCGTTGGGAAACAAGTAATTCTGCTTGTTGACCCAGGATCTTCAAGAGCAGCAGGTGGAGAATCAGAAGCAAATCCGTCAATACTAGATCTTGAAGAACTTGATACAGAAGATAATTTTCCTTCCTTTTCTGACATTGAAGCTATGATACTTGAAATGGATTTATGGCCAAATGATCATGAGTTGTACGTCAGCAAAGAAGTCTTAAGATATCAGCATGAGGATACCAAAAGGAAAATCATGAGGCTCGAACAATGTGCTAGATCAGCCACACAAAGAACCATTGCATCGAAGGGTGCATTTGCTTTCCTGTATGGCCGTCATGTGAAGCATTATATCAAGAAAGCAGAGGTCATGCTTGGTAGATCGACAAATGACTCTAAAGTTGACATTGACTTGAGAAGAGAAGGGCGCGCCAACCAAATTTCGAGACGCCAGGCTGTCATAAGGATGCAAAGAGATGGTTCTTTTGTTCTAAAAAACCTTGGCAAGAATCCAGTCTTTATAAACGGAAAGGAAGTTGGTACTGGACAGCTCCTTAGTCTTAGTTCCAATAGCTTGATCGAGCTTCGGGAAATCGCTCTTGTTTTTGAAACCAATCCGAAATCCGTGAGGCAGTATCTTACCAAATTAACAAGGAACAAATTGCGTAGAGCCAAATCCCATCCTAAGTCTGGAAAATATTGTTGTGTGAAGTTTTCTTTTGGCGATAATTTTTGA 2097 40.63 MASVAPVSSWIPEDDILLKNAVEAGASLEALAKGAVHFSRKFTLQELQDRWRSLLYDPVISAEASGRMLEFELSAPNDLSKSHRFKNSREITAKRKPESIRSLYYRMRKRMCNQAVNPFDRNFLGSPNCTACIGNGGDSERVRMDVDDNLIDYGNCMGPHPHGFPDMPVLKRREDVSIAGWGSDQDVQEMQGDVQIAGEAIGSSDILGFDICDHPDSLLNIPNEDEILFMGFDGKGVMEEAVDSLWLNSPTVYSKDTSDADEHQALVSNKDHPLPEDLSTPVLVDITDLQPDSVHGSHQTLCHPDDNRQSLTFAPSSHSPPNQGEMNCILNSEDPEIPCNDNMFPSKTIRPSFVDDIDLFSSSVLPKNHELEMTLTREDNPKQKGLFPHIIESDILSKSSPNGRTVNHEVTKETRDGYCLSAVARHVNSFPSSPKSCMVEHGTSKSATSNALKEEDGQSAVGKQVILLVDPGSSRAAGGESEANPSILDLEELDTEDNFPSFSDIEAMILEMDLWPNDHELYVSKEVLRYQHEDTKRKIMRLEQCARSATQRTIASKGAFAFLYGRHVKHYIKKAEVMLGRSTNDSKVDIDLRREGRANQISRRQAVIRMQRDGSFVLKNLGKNPVFINGKEVGTGQLLSLSSNSLIELREIALVFETNPKSVRQYLTKLTRNKLRRAKSHPKSGKYCCVKFSFGDNF 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29853749 29859587 + BLOR15781 Blo05g00819 61253

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00819 698 CDD FHA 573 657 IPR000253 GO:0005515
Blo05g00819 698 Pfam N-terminal region of micro-spherule protein 10 69 IPR025999 -
Blo05g00819 698 PANTHER MICROSPHERULE PROTEIN 1 1 128 IPR037912 GO:0002151|GO:0031011|GO:0071339
Blo05g00819 698 PANTHER MICROSPHERULE PROTEIN 1 203 674 IPR037912 GO:0002151|GO:0031011|GO:0071339
Blo05g00819 698 SUPERFAMILY SMAD/FHA domain 556 659 IPR008984 GO:0005515
Blo05g00819 698 ProSiteProfiles Forkhead-associated (FHA) domain profile. 577 633 IPR000253 GO:0005515
Blo05g00819 698 Gene3D - 525 671 - -
Blo05g00819 698 Pfam FHA domain 578 649 IPR000253 GO:0005515
Blo05g00819 698 SMART FHA_2 576 633 IPR000253 GO:0005515
Blo05g00819 698 PANTHER FHA DOMAIN PROTEIN 1 128 - -
Blo05g00819 698 PANTHER FHA DOMAIN PROTEIN 203 674 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00819 - - - cit:102628084 458.759
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01583 Blo-Chr1:55642228 Blo05g00819 Blo-Chr5:29853749 5.68E-109 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1068 . . Bda04g00031 . . . Bma09g00099 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag1662 Cone9ag1585 . . . . Blo05g00819 . . . . Bpe06g00029 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001875 2 6 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 0 1 1 11 13 2 67