Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00821 ATGGAGTATCTTCTCCAGAACAGAAGCTTCCTCTTTCTCTTCCTTCTCGTCCTCCATCTTTCTGAAGCTTGCCATAAAGCCGACGAAGAGGCATTACTTGATTTCAAGGCCAGAATCTCCTCCGACCCCTCGGACCTCCTCCGTTCCTGGAAACTCTCCACCGACTGCTGCAAATCATGGGACGGAATCGGCTGCGACTCCTCCGGCAGAGTCACCAACCTCTCACGTCCGGGCTTCTTCTCCGGGGCTGACTTCATCGTCGATACCGCTATGTCCGGTACTATCTCCCCCTTCCTCGGAAACTTGTCTTTTCTTCAGTTTTTGGACCTGGGAAACCTCAAATACTTGCATGGTCCAATTCCTCACCAGTTGGGCAAACTTTCTCGCCTCACTCACCTTTTTCTTGATTCAAATAACCTCACTGGTTCGATTCCGTTCACTTTTAAAGGCCTTTTTCGGTTGCAGAGGCTTTATCTGAGTAATAATGATCTCTCCGGCAATCTTCCTTGCTCGGTTTTCCGATCTTTCAGGTCAGTTTACGAACTGGGTTTATCTGGAAATAAGTTTTCAGGGTCAATTCCTCGTTCATCTGGAAAGATGATTTCGTTAAAAAATCTCGATCTTCACTCTAATAACATATCTGGGTCTATACCTTCTAGTTTAGGCAAGATTAAGAGCCTCAGATTTCTTGATTTATCAGAAAATCGGATAAGCGGAAGAATTCCTCGATCAATTGGTTGTCTTTCTGAGCTAGAACTGATGTATCTTAATCAGAACCAGATTGGTGGGAAAATTCCTTCTTCCATTTCTGGTCTCAGCTCTTTAATTTTCTGCAGACTTTCAGAAAATAATCTTAGAGGCAGGCTGCCTGAATCCATTGGCAAGCTTCAAAAAATCCAACGGCTGATTCTTGAGAACAACCAGCTTTCTGGAAAATTGCCAGAATCCATAGGCAATCTAACCAGTCTAACCGATTTGTTCTTCTCCAACAACAGTTTCAATGGCAGAATTCCTTCCACTTTGGGTAAATTAAGGAACTTACAAACAATGGATTTATCGAGAAACCGTCTTTCTGGGGGAATCCCTCGTGAATTAGCTGGATTGAAATCGCTTCAGAGCTTGGACCTTTCGTACAATCCTTTAGGGCTCCTGAAAATGCCGGATTGGCTGGAAAATTTGAATCTTTTTCGGCTTTTGTTGGCAAAAACTGGGATCAAAGGAGAGCTTCCAAAGTGGTTGTCTAATTGTTCGTCAATATCAGTTCTTGATTTATCGAGTAATGGATTAAGAGGAAAGTTGCCCATTTGGATTGGAAATTTGACGAGTCTGTCTCTTCTTAATCTATCCAACAATGGCTTCCATTCCGCCATTCCCCACGAATTCAGAATGCTTTCGCAGTTATTAGATCTTGATCTTCGCTCAAACCAGTTCACTGGAAACGTTAACCATGTATTTCAGAAAGATACGCGAGACCCACTTGGCCATTTCAACTCCATCGACCTTTCGAATAATCGGTTCAACGATTGTATGGACCAGCTCATCGGAGATCGACCCTCGATGGACTCAATCACCAGCCTTGTTCTATCTCACAATCTTCTAAAAGGGCCAATTCCAAAATCAATTGGAAAACTGAAGGATTTGCATGTGTTGGAGCTGACGGGAAATGAATTTTCAGGGACTATTCCAGAGGAGCTTGGAAATTTACAGGGACTGAGATCGATTCTACTATCGGAAAACGGGTTGAGCGGTTCGATTCCGGCGAAGATTTTGAATTTGAAGAATCTGGGAAATTTCAACGTGTCTGGAAACAGATTGAGCGGAAGAATTCCTCCCCACAAAGCTAAAATCCCAGCCTCTGCTTTTTCGAAGAATCCTGGCCTCTGTGGATCTCCTCTTCCTTCCTGTAATCATCCACTTTAG 1920 43.59 MEYLLQNRSFLFLFLLVLHLSEACHKADEEALLDFKARISSDPSDLLRSWKLSTDCCKSWDGIGCDSSGRVTNLSRPGFFSGADFIVDTAMSGTISPFLGNLSFLQFLDLGNLKYLHGPIPHQLGKLSRLTHLFLDSNNLTGSIPFTFKGLFRLQRLYLSNNDLSGNLPCSVFRSFRSVYELGLSGNKFSGSIPRSSGKMISLKNLDLHSNNISGSIPSSLGKIKSLRFLDLSENRISGRIPRSIGCLSELELMYLNQNQIGGKIPSSISGLSSLIFCRLSENNLRGRLPESIGKLQKIQRLILENNQLSGKLPESIGNLTSLTDLFFSNNSFNGRIPSTLGKLRNLQTMDLSRNRLSGGIPRELAGLKSLQSLDLSYNPLGLLKMPDWLENLNLFRLLLAKTGIKGELPKWLSNCSSISVLDLSSNGLRGKLPIWIGNLTSLSLLNLSNNGFHSAIPHEFRMLSQLLDLDLRSNQFTGNVNHVFQKDTRDPLGHFNSIDLSNNRFNDCMDQLIGDRPSMDSITSLVLSHNLLKGPIPKSIGKLKDLHVLELTGNEFSGTIPEELGNLQGLRSILLSENGLSGSIPAKILNLKNLGNFNVSGNRLSGRIPPHKAKIPASAFSKNPGLCGSPLPSCNHPL 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29920003 29921922 + BLOR15783 Blo05g00821 61255

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00821 639 Gene3D Ribonuclease Inhibitor 21 81 IPR032675 -
Blo05g00821 639 Pfam Leucine rich repeat 202 261 IPR001611 GO:0005515
Blo05g00821 639 Pfam Leucine rich repeat 322 381 IPR001611 GO:0005515
Blo05g00821 639 Pfam Leucine rich repeat 128 189 IPR001611 GO:0005515
Blo05g00821 639 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 10 637 - -
Blo05g00821 639 SMART LRR_sd22_2 320 349 - -
Blo05g00821 639 SMART LRR_sd22_2 248 274 - -
Blo05g00821 639 SMART LRR_sd22_2 368 395 - -
Blo05g00821 639 SMART LRR_sd22_2 127 148 - -
Blo05g00821 639 PRINTS Leucine-rich repeat signature 368 381 - -
Blo05g00821 639 PRINTS Leucine-rich repeat signature 227 240 - -
Blo05g00821 639 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Blo05g00821 639 SUPERFAMILY L domain-like 323 632 - -
Blo05g00821 639 ProSiteProfiles Leucine-rich repeat profile. 226 248 IPR001611 GO:0005515
Blo05g00821 639 SMART LRR_typ_2 296 320 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 368 392 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 200 224 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 127 150 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 592 623 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 151 175 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 440 463 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 344 367 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 464 487 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 544 568 IPR003591 -
Blo05g00821 639 SMART LRR_typ_2 248 272 IPR003591 -
Blo05g00821 639 Gene3D Ribonuclease Inhibitor 85 243 IPR032675 -
Blo05g00821 639 Gene3D Ribonuclease Inhibitor 325 638 IPR032675 -
Blo05g00821 639 Gene3D Ribonuclease Inhibitor 244 324 IPR032675 -
Blo05g00821 639 SUPERFAMILY RNI-like 92 382 - -
Blo05g00821 639 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 637 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00821 - - - csv:101207198 810.446
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00821 Blo-Chr5:29920003 Blo01g01779 Blo-Chr1:57505901 1.47E-84 dispersed
Blo08g00091 Blo-Chr8:915677 Blo05g00821 Blo-Chr5:29920003 3.18E-22 dispersed
Blo04g00616 Blo-Chr4:5370670 Blo05g00821 Blo-Chr5:29920003 1.71E-63 transposed
Blo12g00666 Blo-Chr12:24965182 Blo05g00821 Blo-Chr5:29920003 2.77E-81 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1070 . . . . . . . . . . . Cma07g00448 . . Sed05g3625 . . Bhi03g00895 Tan03g2047 Cmetu04g0895 . Hepe04g1569 . . Cla01g01956 Cam01g2045 Cec04g1703 Cco04g1768 Clacu01g2067 Cmu01g1944 Cre04g1618 . . Cone6ag1663 Cone9ag1586 Lsi01g00627 . . Cme08g00903 Blo05g00821 . . . . . . . . . Cmo07g00445 . . . . . . . . . . . . . . . . . . . . . Csa06g03298 Chy02g00598 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011386 0 1 2 1 0 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo05g00821 Blo_Chr05 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0