Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00836 ATGGATACGTTGTTTAGGTTGGTTAGTTTGCAATCGGAGCAATCTTACAATTCTAGCAGAACTTCAAGCAGTTCAAGATCTTCCAGACAGAACAATAATCTCTACCCCCAAGAAGAAGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGACTTCTCGTCCTCTTCTTCAAAGCAATACAACTATCATAATCAGCCCCACCAATCCACTACCACTACCAACACCAGCACTCCAACTCCAACTGAATTCTCATTTTCTCCCTCAAATGACCTGAATTTCGAGTTTTCCGGCAAGTGGGCCACCGATATACTTCATGAAACCGGCCGATCCATTGCCGATAAGAACACCGCGCGCCTGCAGCAACTGATGTGGATGCTCAACGAGCTCAGTTCTCCTTACGGAGACACTGATCAAAAGCTGGCGGCGTATTTTCTGCAAGCTTTGTTCAGCCGGATGACAGATTCCGGCGACCGCTGCTACAGTACGTTAGCCACTGCGTCGGAGAAAACATGCTCTTTCGAATCAACGAGGAAGATGGTGCTAAAGTTTCAGGAAGTTAGCCCCTGGACTACTTTTGGCCATGTTTCTTGTAATGGCGCAATAATGGAGGCTTTTGAAGGAGAGTCAAAGCTACACATAATCGACATCAGCAATACGTTTTGTACTCAGTGGCCTACTTTGCTGGAAGCACTCGCAACTCGAACCGACGAGACACCGCATCTCCGGCTAACGACAGTGATAGCAGCGAAATCAGGCAGCGGTGGTGGAGTACTCGCGAATCAGAAGGTGATGAAGGAAGTAGGTTTAAGAATGGAGAAATTCGCTAGGCTCATGGGGGTACCTTTCAAATTCAACGCTGTATACCATTCCGGCGACCTTTCCGACCTGAATTTATCGGAATTGGATATAAAAGAGGACGAAGCGATCGCCGTTAATTGCGTAGGCGGATTACACACAGTCCCGGGGGTTAATAACCGGCGAGATATATTGATTTCATCGTTTCGGAGTTTAAGACCGAGGATAATTACGGTTGTTGAAGAAGAAGCCGATTTAGACGTCGGAGTTGAAGGGATTGATTTTTTAAGTGGGTTTCAAGAATGCGTTCGGTGGTTTAGGGTTTACTTTGAGATGTTGGAAGAAAGCTTTGGGAGAACAAGCAACGAGCGGTTGATGCTGGAGCGATTGGCGGGAAAAGCCATCGTCGACCTCGTGGCTTGCTCTCGGGCGGATTCAGTGGAGCGGCGGGAGTCAGCGGTACGGTGGGGTCGACGACTGCATGGGAGTGGGTTGAGTCCAGTGGCGTTCAGCGATGAAGTTTGCGACGACGTACGAGCGTTGTTAAGACGGTACAAAGAAGAGTGGACGATGAAGCAGGAATCAGACGGCGGCGGGATATTCTTGATGTGGAAGGATCAGGCGGTGGTGTGGGCCAGCGCATGGCGGCCGTGA 1449 48.93 MDTLFRLVSLQSEQSYNSSRTSSSSRSSRQNNNLYPQEEEECFNLFMDEEDFSSSSSKQYNYHNQPHQSTTTTNTSTPTPTEFSFSPSNDLNFEFSGKWATDILHETGRSIADKNTARLQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRCYSTLATASEKTCSFESTRKMVLKFQEVSPWTTFGHVSCNGAIMEAFEGESKLHIIDISNTFCTQWPTLLEALATRTDETPHLRLTTVIAAKSGSGGGVLANQKVMKEVGLRMEKFARLMGVPFKFNAVYHSGDLSDLNLSELDIKEDEAIAVNCVGGLHTVPGVNNRRDILISSFRSLRPRIITVVEEEADLDVGVEGIDFLSGFQECVRWFRVYFEMLEESFGRTSNERLMLERLAGKAIVDLVACSRADSVERRESAVRWGRRLHGSGLSPVAFSDEVCDDVRALLRRYKEEWTMKQESDGGGIFLMWKDQAVVWASAWRP 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30235207 30236655 + BLOR15798 Blo05g00836 61270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00836 482 MobiDBLite consensus disorder prediction 55 84 - -
Blo05g00836 482 PANTHER PROTEIN SHORT-ROOT 1 481 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Blo05g00836 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 481 IPR005202 -
Blo05g00836 482 MobiDBLite consensus disorder prediction 15 34 - -
Blo05g00836 482 ProSiteProfiles GRAS family profile. 91 481 IPR005202 -
Blo05g00836 482 Pfam GRAS domain family 103 481 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00836 Blo-Chr5:30235207 Blo13g00392 Blo-Chr13:23028490 3.42E-60 dispersed
Blo16g00358 Blo-Chr16:10863690 Blo05g00836 Blo-Chr5:30235207 2.30E-45 dispersed
Blo05g00836 Blo-Chr5:30235207 Blo06g00014 Blo-Chr6:333103 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12435 PF03514 GRAS 6.50E-104 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00836 - - jre:109002462 710.679