Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00857 ATGTCTACCCAGAATCGACGATCGTCCTTTTCCTCCTCTACCTCGTCGTCACTAGCGAAGAGGCATGCCTCCTCGGAAAATATGGGGAAGCTTACGGCTGTTCCTCATCACGCAAAGAAGCGGGCGCCTCTCGCTAACCTCACTAATTTGAAGAGTGCATCGCGAAGCTCTGTCCCATCTTCTACTATGGTACCATGCGTTACAAAAATTTCCAAGGCCAAGAAACGTTCCCCTGGAAGAAATGGTATCGCAGCCTTACCAGGGAATGCTATGGTCAATGTGAAATCAACTTCAGTGGCTCCTCTTAAATCTACACCTTTACTGAAAAGTGAAGCAATCATTCCTCCCTCTGCTGTAATTCTTCCTCCTAACAGCATGGATGTGTCTCCAAGTAAATCAGATGGAGTTTCAGTTTCTTTAGATGAGACAATGTCTACTTCTGATTCATTTAAGAGTCCTGAAGTTGAGTATGTAGACAACAATGATGTATCAATGGTCGATTCAATTGAGAGGAAAACATTTAGCATTCTCCACATTTCAGACCACAATGTAGAAACCAAAGGTGGGAATATTTGCAGCAGAGATATGCTTGTTGACCTTGAAAGAGATGAAAAATTCGTGGATGTTGATAATGATTACGAGGATCCCCAGAAGTGTGCTACCATGGCTTGTGATATTTACATGCATTTGCGGGCATCTGAGGCAAAGAAAAGGCCTTCCACAGATTTCATGGAGAGAATTCAGAAAGACATAAATGCTAACATGCGAGCAATTTTAGTCGATTGGCTTGTGGAGGTAGCAGAAGAATACAGGCTAGTCCCTGATACGCTCTATCTGACTGTAAATTACATTGATCGCTATCTCTCTGGGAATCCTATGGACAGACAAAGATTACAGTTGCTTGGCGTTGCTTCAATGATGATCGCATCGAAGTACGAGGAGATTTGTGCGCCACAGGTGGAAGAATTTTGTTACATCACAGATAATACATACTTTAAGGAAGAGGTTTTGCAAATGGAGTCCTCTGTGTTGAATTACTTGAAGTTTGAGATGACTGCACCAACAACTAAGTGTTTCTTAAGGCGATTTGTTCGTGCTGCTCAAAGTACTGATGAGGTTCCAGCAATGCAAATGGAATGCTTGGCTAACTTCCTTGCCGAGCTGTCTCTGATTGAGTACAGCATGCTCGTTTATTCTCCATCACTCATTGCGGCTTCTGCCATTTTCTTGGCAAAATTCATACTTTTCCCGGCTATGAGACCATGGAACTCCACTTTGCAGCACTACACTCTTTACCAGCCTTGTGATCTAAGAGATTGTGTAAAGGACTTGCATAAATTGTGCTGCAATTCTCCTACTTCTACCCTTCCAGCAATCAGGGAGAAATACAGCCAACACAAGTACAAGCAAGTGGCAACAAAGCATTGCCCTCCAATACTACCTCCTGAGTTTTTTAACTATCAAACCCAC 1470 42.99 MSTQNRRSSFSSSTSSSLAKRHASSENMGKLTAVPHHAKKRAPLANLTNLKSASRSSVPSSTMVPCVTKISKAKKRSPGRNGIAALPGNAMVNVKSTSVAPLKSTPLLKSEAIIPPSAVILPPNSMDVSPSKSDGVSVSLDETMSTSDSFKSPEVEYVDNNDVSMVDSIERKTFSILHISDHNVETKGGNICSRDMLVDLERDEKFVDVDNDYEDPQKCATMACDIYMHLRASEAKKRPSTDFMERIQKDINANMRAILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMDRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTTKCFLRRFVRAAQSTDEVPAMQMECLANFLAELSLIEYSMLVYSPSLIAASAIFLAKFILFPAMRPWNSTLQHYTLYQPCDLRDCVKDLHKLCCNSPTSTLPAIREKYSQHKYKQVATKHCPPILPPEFFNYQTH 490
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 31001401 31004252 - BLOR15819 Blo05g00857 61291
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00857 490 MobiDBLite consensus disorder prediction 1 84 - -
Blo05g00857 490 SUPERFAMILY Cyclin-like 354 478 IPR036915 -
Blo05g00857 490 MobiDBLite consensus disorder prediction 47 67 - -
Blo05g00857 490 CDD CYCLIN 255 344 IPR013763 -
Blo05g00857 490 PANTHER CYCLIN-A1-1 29 487 - -
Blo05g00857 490 MobiDBLite consensus disorder prediction 1 23 - -
Blo05g00857 490 Pfam Cyclin, N-terminal domain 225 351 IPR006671 -
Blo05g00857 490 Gene3D - 239 352 - -
Blo05g00857 490 PANTHER CYCLINS 29 487 IPR039361 -
Blo05g00857 490 SUPERFAMILY Cyclin-like 214 351 IPR036915 -
Blo05g00857 490 ProSitePatterns Cyclins signature. 256 287 IPR006671 -
Blo05g00857 490 Gene3D - 225 473 - -
Blo05g00857 490 CDD CYCLIN 352 445 IPR013763 -
Blo05g00857 490 SMART cyclin_7 261 345 IPR013763 -
Blo05g00857 490 SMART cyclin_7 358 446 IPR013763 -
Blo05g00857 490 PIRSF Cyclin_A_B_D_E 1 483 IPR039361 -
Blo05g00857 490 Pfam Cyclin, C-terminal domain 354 475 IPR004367 -
Blo05g00857 490 SMART Cyclin_C_2 354 477 IPR004367 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01510 Blo-Chr1:54659954 Blo05g00857 Blo-Chr5:31001401 1.87E-102 dispersed
Blo05g00111 Blo-Chr5:1047779 Blo05g00857 Blo-Chr5:31001401 7.41E-97 dispersed
Blo05g00857 Blo-Chr5:31001401 Blo18g00177 Blo-Chr18:1706331 0 dispersed
Blo14g00530 Blo-Chr14:7662425 Blo05g00857 Blo-Chr5:31001401 7.01E-25 dispersed
Blo05g00857 Blo-Chr5:31001401 Blo12g01089 Blo-Chr12:28551756 2.92E-105 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00857 K06627 - mnt:21396560 676.781