Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo05g00857 | ATGTCTACCCAGAATCGACGATCGTCCTTTTCCTCCTCTACCTCGTCGTCACTAGCGAAGAGGCATGCCTCCTCGGAAAATATGGGGAAGCTTACGGCTGTTCCTCATCACGCAAAGAAGCGGGCGCCTCTCGCTAACCTCACTAATTTGAAGAGTGCATCGCGAAGCTCTGTCCCATCTTCTACTATGGTACCATGCGTTACAAAAATTTCCAAGGCCAAGAAACGTTCCCCTGGAAGAAATGGTATCGCAGCCTTACCAGGGAATGCTATGGTCAATGTGAAATCAACTTCAGTGGCTCCTCTTAAATCTACACCTTTACTGAAAAGTGAAGCAATCATTCCTCCCTCTGCTGTAATTCTTCCTCCTAACAGCATGGATGTGTCTCCAAGTAAATCAGATGGAGTTTCAGTTTCTTTAGATGAGACAATGTCTACTTCTGATTCATTTAAGAGTCCTGAAGTTGAGTATGTAGACAACAATGATGTATCAATGGTCGATTCAATTGAGAGGAAAACATTTAGCATTCTCCACATTTCAGACCACAATGTAGAAACCAAAGGTGGGAATATTTGCAGCAGAGATATGCTTGTTGACCTTGAAAGAGATGAAAAATTCGTGGATGTTGATAATGATTACGAGGATCCCCAGAAGTGTGCTACCATGGCTTGTGATATTTACATGCATTTGCGGGCATCTGAGGCAAAGAAAAGGCCTTCCACAGATTTCATGGAGAGAATTCAGAAAGACATAAATGCTAACATGCGAGCAATTTTAGTCGATTGGCTTGTGGAGGTAGCAGAAGAATACAGGCTAGTCCCTGATACGCTCTATCTGACTGTAAATTACATTGATCGCTATCTCTCTGGGAATCCTATGGACAGACAAAGATTACAGTTGCTTGGCGTTGCTTCAATGATGATCGCATCGAAGTACGAGGAGATTTGTGCGCCACAGGTGGAAGAATTTTGTTACATCACAGATAATACATACTTTAAGGAAGAGGTTTTGCAAATGGAGTCCTCTGTGTTGAATTACTTGAAGTTTGAGATGACTGCACCAACAACTAAGTGTTTCTTAAGGCGATTTGTTCGTGCTGCTCAAAGTACTGATGAGGTTCCAGCAATGCAAATGGAATGCTTGGCTAACTTCCTTGCCGAGCTGTCTCTGATTGAGTACAGCATGCTCGTTTATTCTCCATCACTCATTGCGGCTTCTGCCATTTTCTTGGCAAAATTCATACTTTTCCCGGCTATGAGACCATGGAACTCCACTTTGCAGCACTACACTCTTTACCAGCCTTGTGATCTAAGAGATTGTGTAAAGGACTTGCATAAATTGTGCTGCAATTCTCCTACTTCTACCCTTCCAGCAATCAGGGAGAAATACAGCCAACACAAGTACAAGCAAGTGGCAACAAAGCATTGCCCTCCAATACTACCTCCTGAGTTTTTTAACTATCAAACCCAC | 1470 | 42.99 | MSTQNRRSSFSSSTSSSLAKRHASSENMGKLTAVPHHAKKRAPLANLTNLKSASRSSVPSSTMVPCVTKISKAKKRSPGRNGIAALPGNAMVNVKSTSVAPLKSTPLLKSEAIIPPSAVILPPNSMDVSPSKSDGVSVSLDETMSTSDSFKSPEVEYVDNNDVSMVDSIERKTFSILHISDHNVETKGGNICSRDMLVDLERDEKFVDVDNDYEDPQKCATMACDIYMHLRASEAKKRPSTDFMERIQKDINANMRAILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMDRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTTKCFLRRFVRAAQSTDEVPAMQMECLANFLAELSLIEYSMLVYSPSLIAASAIFLAKFILFPAMRPWNSTLQHYTLYQPCDLRDCVKDLHKLCCNSPTSTLPAIREKYSQHKYKQVATKHCPPILPPEFFNYQTH | 490 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 31001401 | 31004252 | - | BLOR15819 | Blo05g00857 | 61291 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo05g00857 | 490 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
| Blo05g00857 | 490 | SUPERFAMILY | Cyclin-like | 354 | 478 | IPR036915 | - | |
| Blo05g00857 | 490 | MobiDBLite | consensus disorder prediction | 47 | 67 | - | - | |
| Blo05g00857 | 490 | CDD | CYCLIN | 255 | 344 | IPR013763 | - | |
| Blo05g00857 | 490 | PANTHER | CYCLIN-A1-1 | 29 | 487 | - | - | |
| Blo05g00857 | 490 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Blo05g00857 | 490 | Pfam | Cyclin, N-terminal domain | 225 | 351 | IPR006671 | - | |
| Blo05g00857 | 490 | Gene3D | - | 239 | 352 | - | - | |
| Blo05g00857 | 490 | PANTHER | CYCLINS | 29 | 487 | IPR039361 | - | |
| Blo05g00857 | 490 | SUPERFAMILY | Cyclin-like | 214 | 351 | IPR036915 | - | |
| Blo05g00857 | 490 | ProSitePatterns | Cyclins signature. | 256 | 287 | IPR006671 | - | |
| Blo05g00857 | 490 | Gene3D | - | 225 | 473 | - | - | |
| Blo05g00857 | 490 | CDD | CYCLIN | 352 | 445 | IPR013763 | - | |
| Blo05g00857 | 490 | SMART | cyclin_7 | 261 | 345 | IPR013763 | - | |
| Blo05g00857 | 490 | SMART | cyclin_7 | 358 | 446 | IPR013763 | - | |
| Blo05g00857 | 490 | PIRSF | Cyclin_A_B_D_E | 1 | 483 | IPR039361 | - | |
| Blo05g00857 | 490 | Pfam | Cyclin, C-terminal domain | 354 | 475 | IPR004367 | - | |
| Blo05g00857 | 490 | SMART | Cyclin_C_2 | 354 | 477 | IPR004367 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g01510 | Blo-Chr1:54659954 | Blo05g00857 | Blo-Chr5:31001401 | 1.87E-102 | dispersed | |
| Blo05g00111 | Blo-Chr5:1047779 | Blo05g00857 | Blo-Chr5:31001401 | 7.41E-97 | dispersed | |
| Blo05g00857 | Blo-Chr5:31001401 | Blo18g00177 | Blo-Chr18:1706331 | 0 | dispersed | |
| Blo14g00530 | Blo-Chr14:7662425 | Blo05g00857 | Blo-Chr5:31001401 | 7.01E-25 | dispersed | |
| Blo05g00857 | Blo-Chr5:31001401 | Blo12g01089 | Blo-Chr12:28551756 | 2.92E-105 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo05g00857 | K06627 | - | mnt:21396560 | 676.781 |