Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00008 ATGAGTTGCAATGGCTGCCGTGTTCTTCGCAAGGGTTGCAGTGAGACCTGTATTCTTCGCCCCTGTTTGCAGTGGATTCCCACTCCCGAGTCTCAGGGCCACGCCACTGTCTTCGTTGCCAAGTTCTTCGGTCGCGCTGGTCTCATCTCTTTCATCTCCGCTGTCCCCGAGTCTCAGCGACCTTCGCTATTTCAGTCTTTGTTGTTCGAAGCGTGTGGACGGACGGTTAATCCTGTGAGCGGAGCTGTTGGCCTCCTCTGGACTGGAAATTGGAACGCCTGCCAGACCGCTGTCGAGACCGTCCTAGGAGGGGGAACGTTGCGCACCATCCCTGATCTGGTCACCGGAGGGTCTCCTGCTCCGCCTTCGGACGAAGATTCTGAGGCCGAAGTGGCCTGTACAGACATGTGGAAGCTCCAAGAATGGAAACCGAATTCCAGGTTTTCCAATTCGCGATCCAGGCCCTTGATCAAACGCAAACGTACGGAGGAAGTGACGAAGCTTCCACTGACAGATCTAGATCTTCGCCTCACGTCAGGTTTACCGGAAAAAATGTCGTGTGAACTCCGGCGACCGGAGACTCCATCGAGGAATTCGGAGGAGTCCGTGACCACTTCGTGCATCGAATTGGATTTAGGCGATCGGAAGGGTGATGAGGGAAATGAAAAGCTTCTGAATTTGTTCATC 687 54.29 MSCNGCRVLRKGCSETCILRPCLQWIPTPESQGHATVFVAKFFGRAGLISFISAVPESQRPSLFQSLLFEACGRTVNPVSGAVGLLWTGNWNACQTAVETVLGGGTLRTIPDLVTGGSPAPPSDEDSEAEVACTDMWKLQEWKPNSRFSNSRSRPLIKRKRTEEVTKLPLTDLDLRLTSGLPEKMSCELRRPETPSRNSEESVTTSCIELDLGDRKGDEGNEKLLNLFI 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 221401 222169 - BLOR16591 Blo06g00008 61301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00008 229 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Blo06g00008 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
Blo06g00008 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Blo06g00008 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 229 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00008 Blo16g00414 CCT
Blo06g00008 Blo16g00414 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00008 Blo-Chr6:221401 Blo18g00717 Blo-Chr18:17618546 2.34E-52 dispersed
Blo16g00357 Blo-Chr16:10667141 Blo06g00008 Blo-Chr6:221401 1.42E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12438 PF03195 LOB 3.10E-25 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00008 - - mesc:110627341 327.791