Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00014 ATGGATACGTTGTTTAGGTTGTTTAGTCTGCAATCTGAACAATCTTACAATTCCAGCAGAACTTCGAGCAGTTCAAGATCTTCCCGACAGAATAATCTTTACCGACAGGAAGAAGAATGCTTCAATCTTTTCATGGATGAAGAAGACTTCTCGTCGTCTTCTTCAAAACACTGTAACTATCCTAATCAGCTCCACCAATTCACTATCTCTACCAACACAGGCACTCCAACTCCCACTGAATTCTCCTTTTCTCCCTCAAATGACCTGAATTTCGAGTTTCCCGGCAAGTGGCCGACCGATATACTTCTCGAAACTGGCCGAGCCTTTGCTAATAAGAACAGCACGCGCGTGCAGCAACTTATGTGGATGCTCAATGAGCTCAGCTCTCCCTACGGTGACACCGATCAGAAGCTGGCGTCGTATTTTCTTCAAGCTTTGTTTAGCCGGATGACAGATTCCGGCGACCGCTGCTACTGTACTTTAGCCGCTTCGTCGGAGAAAACGTGCTCTTTCGAATCGACGAGGAAGATGGTGTTGAAGTTTCAGGAAGTTAGCCCCTGGACTACGTTCAGCCATGTGTCATGTAATGGTGCAATCATGGAGGCTTTCGAGGGAGAGGCAAAGCTACACATAATAGATATCAGCAATACGTATTGCACCCAATGGCCTACTTTGCTCGAAGCGCTCGCAACTCGTACCGACGATACTCCGCACGTCAGTCTGACGACGGTGATCGCTGCGAGGCCTGGCGTCGGTGGCGGAGGAATGCTCGCAAATCAGAAGATAATGAAAGAAATAGGTTTAAGAATGGAGAAATTCGCTAGACTCATGGGGGTGCCTTTCAAATTCAACGCTGTATATCATTCCGGCGACCTTTCCGACCTAGACCTATCGCAATTGGACATCAAGGACGACGAAGCGATCGCTGTCAACTGCGTCGGTGGATTACACACAGTCCCGGATGTCAATAACCGGCGTGACACCTTGATTTCGTCGTTCCGGAGTCTAAAACCGAGGATAATAACGGTGGCAGAAGAAGAAGCTGATTTAGACGTTGGAGTTGAAGGGATTGACTTTTTAAGAGGGTTTCAAGAATGCGTTCGGTGGTTTAGGGTTTACTTCGAAACTTTGGAAGAGAGCTTTACGAGAACGAGCAACGAGCGGTTGATGCTGGAGAGATCGGCCGGAAAGGCCATTGTAGACCTGATAGCTTGCTCACCGGCGGACTCAACGGAGAGGCGGGAGTCTGCGGTCGGGTGGGCACGACGACTGCTTGGAAGTGGGTGCAGCCCGGTGGCGTTTAGCGATGAAGTTTCGGACGACGTTCAAGCGCTGTTAAGACGGTACAAAGAAGGCTGGACGATGAAGAAGGGGCCAGAGGGGGCAGGAATATTCTTGGCGTGGAAGGATCAGCCGGTTGTCTGGGCCAGTGCATGGAGGCCATAA 1446 49.79 MDTLFRLFSLQSEQSYNSSRTSSSSRSSRQNNLYRQEEECFNLFMDEEDFSSSSSKHCNYPNQLHQFTISTNTGTPTPTEFSFSPSNDLNFEFPGKWPTDILLETGRAFANKNSTRVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTDSGDRCYCTLAASSEKTCSFESTRKMVLKFQEVSPWTTFSHVSCNGAIMEAFEGEAKLHIIDISNTYCTQWPTLLEALATRTDDTPHVSLTTVIAARPGVGGGGMLANQKIMKEIGLRMEKFARLMGVPFKFNAVYHSGDLSDLDLSQLDIKDDEAIAVNCVGGLHTVPDVNNRRDTLISSFRSLKPRIITVAEEEADLDVGVEGIDFLRGFQECVRWFRVYFETLEESFTRTSNERLMLERSAGKAIVDLIACSPADSTERRESAVGWARRLLGSGCSPVAFSDEVSDDVQALLRRYKEGWTMKKGPEGAGIFLAWKDQPVVWASAWRP 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 333103 334548 - BLOR16597 Blo06g00014 61307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00014 481 PANTHER PROTEIN SHORT-ROOT 1 480 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Blo06g00014 481 Pfam GRAS domain family 100 480 IPR005202 -
Blo06g00014 481 ProSiteProfiles GRAS family profile. 89 480 IPR005202 -
Blo06g00014 481 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 480 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00014 Blo-Chr6:333103 Blo02g00135 Blo-Chr2:1150119 9.92E-53 dispersed
Blo13g00392 Blo-Chr13:23028490 Blo06g00014 Blo-Chr6:333103 4.88E-62 transposed
Blo16g00358 Blo-Chr16:10863690 Blo06g00014 Blo-Chr6:333103 1.26E-46 transposed
Blo05g00836 Blo-Chr5:30235207 Blo06g00014 Blo-Chr6:333103 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12440 PF03514 GRAS 1.40E-99 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00014 - - jre:109002462 686.026