Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo06g00015 | ATGATTCAAGGTGGTGATCCAACTGGAAGTGGGAGAGGAGGAGAATCTATTTGGGGAAAGCCATTTAAAGATGAATTAAACTCTAAGTTGGTTCACTCTGGGCGAGGCGTAGTCAGTATGGCAAACAGTGGTCCTCACACGAATGGTTCTCAGTTCTTTATCCTTTACAAATCTGCAAATCACTTAAACTTCAAGCATACACTATTTGGTGGAGTTGTAGGTAACTTGACTACTCTGGCAGCCATGGAAAAGGTTCCAGTCGATGATGATGACCGACGTATGGATAAAGCTGGATCATGGTATAGTAATCCCGGCACTGGAGCATTAGAAACCCAAGCGATAGGCAGTGGCGGTGCGGGTGTTGGCAAATACTTGAAAGCTAGAAATGGCAAAGCTGAGTCTTCCAACGTTGAGGCAAGTAGTAAAGTAGAAGCAAATGCTATAACAAAGAAGAGGAAAGTTGGAGTCTCCTCGACAGAATTCAAAGACTTCTCGTCATGTGAAGATTGGAGGGATTTCAGCAGCAGCAGAAAGTGGAGGAGTTGCAGGGCTCTGTTCTCAATTCAAGGCATTTTCAGCGTTGCCCTGGAAAGCAGCAGCAGAGAAAAGGGTCGGGGAGTTGGCGAGGGGGGACTTGCGGTCCTTGTCGAGCCTGAGCTTGGTTATGACGACCTTGGAGGGGTTGATACCCACATTGACGGTGGATCCATTAACCTTCTCGCGGGTGATCCGTTCGATATGGATAACCCACTTGCGGCGGTACACCTGAACAACCTTACCCTCGCGCCCCTTGAAGGAGCCACGGACGATTTGGATCTCGTCGTCCTTGCGAATGGGCATAGAGCGGACGTTGTACTTGGAGCGGAGATCCGTCGAGAGAGGAGCGCTCATGAGGACTCGTCGGACGCTGGACGGCGCGTTGAAGTGCGCCTTTCGGTTCTTGCGGCGGGAGCTGGTAACGCTTGGATTGTACTTCATTGTAGGGGCGGAGGAGAGTGGGGAGGAGATAGGGATTTAGGGCTTCCCGCAGCTTCTGAAAATGGAGGGTTCTTGACTTTTATAGAGGCTCACCTCAGAGCATTCCGTTTGCTGCGCCGTTTGATGGTGTTCAGAACCAAATCGGACCAGACTCGAACCAATCAATTCGGTTTGGAATGGGTCGGTTTCAAAAATCAAAGAATTGAATTTTGA | 1191 | 49.54 | MIQGGDPTGSGRGGESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTLFGGVVGNLTTLAAMEKVPVDDDDRRMDKAGSWYSNPGTGALETQAIGSGGAGVGKYLKARNGKAESSNVEASSKVEANAITKKRKVGVSSTEFKDFSSCEDWRDFSSSRKWRSCRALFSIQGIFSVALESSSREKGRGVGEGGLAVLVEPELGYDDLGGVDTHIDGGSINLLAGDPFDMDNPLAAVHLNNLTLAPLEGATDDLDLVVLANGHRADVVLGAEIRRERSAHEDSSDAGRRVEVRLSVLAAGAGNAWIVLHCRGGGEWGGDRDLGLPAASENGGFLTFIEAHLRAFRLLRRLMVFRTKSDQTRTNQFGLEWVGFKNQRIEF | 396 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 357041 | 359901 | - | BLOR16598 | Blo06g00015 | 61308 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo06g00015 | 396 | Gene3D | - | 1 | 98 | IPR029000 | - | |
| Blo06g00015 | 396 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 92 | IPR002130 | GO:0000413|GO:0003755 | |
| Blo06g00015 | 396 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 1 | 91 | IPR002130 | GO:0000413|GO:0003755 | |
| Blo06g00015 | 396 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Blo06g00015 | 396 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 51 | 63 | IPR002130 | GO:0000413|GO:0003755 | |
| Blo06g00015 | 396 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 36 | 51 | IPR002130 | GO:0000413|GO:0003755 | |
| Blo06g00015 | 396 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 79 | IPR002130 | GO:0000413|GO:0003755 | |
| Blo06g00015 | 396 | PANTHER | RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 | 1 | 92 | - | - | |
| Blo06g00015 | 396 | SUPERFAMILY | Cyclophilin-like | 1 | 92 | IPR029000 | - | |
| Blo06g00015 | 396 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 1 | 92 | IPR044666 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo06g00015 | Blo-Chr6:357041 | Blo06g00020 | Blo-Chr6:395409 | 1.46E-83 | dispersed | |
| Blo06g00015 | Blo-Chr6:357041 | Blo06g00019 | Blo-Chr6:381516 | 6.69E-18 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo06g00015 | K10598 | - | pop:7489779 | 246.128 |