Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00019 ATGATTGAAGGTGGTGATCCAACTGGAAGTGGGAGAGGAGGAGAACCTGTTTGGGGAAAGCCATTTAAAGATGAATTCAACTCTAAGTTGGTTGACTCTGGGCGAGGCGTAGTCAGTATGGCAAACAGTGGTCCTCACACGAATGGTTCTCAGTTCTTTATCCTTTACAAATCTGCAAATCACTTAAACTTCAAGCATACAGTATTTGGCGGAGTTGTAGGTAACTTGACTACTCTGACAGCCATGGAAAAGGTTGCAGTCGATGATGATGACCGACCTATGGAAGAGATTAAAATAACTAGCGTCACAATTTTTGTCAATCCTTACACAGAACCCGACGAAGAAGAGGAAGAAAAGGCAAAAGAAGAGAAGAAAGCTCTGGATGAAGATAATGATAAAGTTGGATCATGGTATAGTAATCCCGGCACCCGAGCATCAGAAACCCAAGCGGTAGGGGGGTGTTGGCAAATATTTGGAGATTTGGAAATTGATCGAGTCGAAGAAGATACTGCAGTCTTTCGCATTTTACAATCGAGATTTTCGTCAAATTCGTGTTTGCAAAAATTGCAATTCAGTAATGGAGTTTGGAAGGAGTTTTATCTCACGATTGTAGGAAATGTCAAGATGCCTGAAGTGGCTAAGACTTCCAATACCTTTGGGAAGTTCTCTCTGGTGTTGTCTACACCAGGAAATGTCAAGATGCCTCAAGTGGACAAGACTTCCAATACCTTTGGGAAGTTCTTTCAGGTTTTCACAATGGGAAATGTCAAGATGCCTCAAGTGGACAAGACTTCCAATATCTTTGGGAAGTTTTTTCAGGATAAAGTTGGATCATGGTATTGTAATCCCGGCACAGGAGCATCAGAAACCCAAGCGGTAGGCAGTGGCGGTGCGGGTGTTGGCAAATACTTGAAAGCTAGAAATGGCAAAGCTGAATCTTCCAATGTTGAGGCAAGTAGTAAAGTAGAAGCAAATGCCATAAACGAAAAAAGAGAAAAGTTGAAGTCTCCTCTGCAGAATTCAAAGACTTGTCGTCATGTGAAGATCGGAGGAATTTCAGCAGCAGCAGAAGAAAATGGAGGAGTTGCAGACCTTTGTTCTCAATTCAAGGCATTATCAGCGTTGCCATGGCCCGCCTGCTCGGCTCGTTACTGTAGCAGTCCGAGCTCGGCTCGGACCGCTATAGTAACCGAGCGGGCTCAGCCCGGGCCCAGTAGAAGGGCCGAGCCGAGCCCCAGCACCCGGGCTCGCGAGCTCGGTGAGCCTGGGCTCGCGAGCTTGCCTGGCGGGCTGCCTCCGGAGCCTGGCGGGCTGGCCAGGCTAGCTAGCTCGCGAGCCAGCCCACCACTCTACCCGAGCCCGAGCTCGCGACGACGGGGAGTCGGGGACAGCCGGACAGGGGACTGA 1407 48.33 MIEGGDPTGSGRGGEPVWGKPFKDEFNSKLVDSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGNLTTLTAMEKVAVDDDDRPMEEIKITSVTIFVNPYTEPDEEEEEKAKEEKKALDEDNDKVGSWYSNPGTRASETQAVGGCWQIFGDLEIDRVEEDTAVFRILQSRFSSNSCLQKLQFSNGVWKEFYLTIVGNVKMPEVAKTSNTFGKFSLVLSTPGNVKMPQVDKTSNTFGKFFQVFTMGNVKMPQVDKTSNIFGKFFQDKVGSWYCNPGTGASETQAVGSGGAGVGKYLKARNGKAESSNVEASSKVEANAINEKREKLKSPLQNSKTCRHVKIGGISAAAEENGGVADLCSQFKALSALPWPACSARYCSSPSSARTAIVTERAQPGPSRRAEPSPSTRARELGEPGLASLPGGLPPEPGGLARLASSRASPPLYPSPSSRRRGVGDSRTGD 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 381516 386954 - BLOR16602 Blo06g00019 61312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00019 468 MobiDBLite consensus disorder prediction 397 468 - -
Blo06g00019 468 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 103 IPR002130 GO:0000413|GO:0003755
Blo06g00019 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 IPR002130 GO:0000413|GO:0003755
Blo06g00019 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 79 IPR002130 GO:0000413|GO:0003755
Blo06g00019 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Blo06g00019 468 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 104 IPR002130 GO:0000413|GO:0003755
Blo06g00019 468 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 1 161 IPR044666 -
Blo06g00019 468 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 1 161 - -
Blo06g00019 468 MobiDBLite consensus disorder prediction 1 21 - -
Blo06g00019 468 Gene3D - 1 118 IPR029000 -
Blo06g00019 468 MobiDBLite consensus disorder prediction 118 132 - -
Blo06g00019 468 SUPERFAMILY Cyclophilin-like 1 114 IPR029000 -
Blo06g00019 468 Coils Coil 113 133 - -
Blo06g00019 468 MobiDBLite consensus disorder prediction 109 146 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00019 Blo-Chr6:381516 Blo16g00624 Blo-Chr16:24949487 8.09E-27 dispersed
Blo06g00015 Blo-Chr6:357041 Blo06g00019 Blo-Chr6:381516 6.69E-18 proximal
Blo06g00019 Blo-Chr6:381516 Blo06g00020 Blo-Chr6:395409 1.46E-12 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00019 K10598 - gmx:100819923 255.373