Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo06g00028 | ATGGGATTCTCTCTTACATCTTCTTCCTCTTCTTCAAATCTTCTTAAAAATCAACAAATACACCCTTCTTCTTCTTCGTCGTCTTCCGCCTTTCTTCCGCCTTCAAACCTTTTCCTTTCTCCATCACAGCTCAACTATGGCGGTTTCTGCGATGGACCGGTTGCCAGTGAAAACGGAGGCTTCTACTCTCCTTTGTCTTTGATGCCTCTTAATTCTGATGGATCTCTATGTCTAATGGAAGCTCTCACCAGTCTCAAGTCTCCGAAGTTGGAAGATTTCTTTGGTGGTGCAACAATGGCCGCCCATCACTATGAAGGTCACAGCCATCAAAATGACGAGCAGATTGAAACCCAGAACTTGAGTTACTATTCTGGGCTTTTTCAAGAACCAAGAATGCGTCAGATTGGTGAGTGCAATCTGCAGAGACCAACGATGGCGGAAAATGATGCGTCTGGTTTGAAAAACTGGGTTCTTGCAATGAGTCCGAGCTCTCAATCGAGCTGCGTGACTGGTTCACAGCTACTCTCATCTTCTGCTACTGACTGTATAGCCATGGAGACGAAGAAAAGAGGAGCTGAGAAAATGGGTCAAAAGCAAGTTGTTCATCGGAAATCGTTGGATACATTTGGGCAAAGAACTTCGCAGTATAGAGGCGTTACAAGGTCACACAGGTGGACTGGTAGATATGAAGCTCATTTATGGGATAACAGTTGTAAGAAAGAGGGACAAAGTAGGAAAGGAAGACAAGGTGGGTACGATATGGAAGAGAAGGCTGCTAAGGCTTATGATCTTGCTGCCATTAAATATTGGGGACCCTCAACTCACATTAACTTCCCTGTGGAAACTTACCAGAAAGAGATGGAGGAGATGAAGAACATGACAAGACAGGCGTATGTCGCTCATCTTAGAAGAAAGAGTAGTGGATTCTCGAGGGGAGCTTCCATTTACAGAGGAGTGACAAGACACCATCAACATGGAAGATGGCAAGCTCGGATCGGAAGAGTTGCTGGAAATAAAGATCTTTACCTAGGAACATTCAGCACTCAAGAGGAAGCAGCTGAAGCCTACGACGTTGCCGCCATTAAATTCAGAGGCTTAAACGCTGTGACCAACTTCGACATTGCAAGATACGAAGTGGAGAGGATAATGGAGAGCAATACCCTCCTCGCTGGAGACCTAGCGAGGCGTGGTAAGGAAATGGAAGCTGGAAAAGAGCCGAGTATCAACGGAGAAGAGGACGTGGGTTTGATCTTGCAGCAGAGCTCTAATGGCGGCGAGAATATGGGGAGCCATCATCCGTCCTCTCAGCTTCCAAGCTTGGAAAAATTTGCACATTCGATTTCCCCAGTTTTTGCTGCTTGGACAGATGCATGA | 1374 | 46.0 | MGFSLTSSSSSSNLLKNQQIHPSSSSSSSAFLPPSNLFLSPSQLNYGGFCDGPVASENGGFYSPLSLMPLNSDGSLCLMEALTSLKSPKLEDFFGGATMAAHHYEGHSHQNDEQIETQNLSYYSGLFQEPRMRQIGECNLQRPTMAENDASGLKNWVLAMSPSSQSSCVTGSQLLSSSATDCIAMETKKRGAEKMGQKQVVHRKSLDTFGQRTSQYRGVTRSHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAAKAYDLAAIKYWGPSTHINFPVETYQKEMEEMKNMTRQAYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDIARYEVERIMESNTLLAGDLARRGKEMEAGKEPSINGEEDVGLILQQSSNGGENMGSHHPSSQLPSLEKFAHSISPVFAAWTDA | 457 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 526846 | 528895 | + | BLOR16611 | Blo06g00028 | 61321 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo06g00028 | 457 | CDD | AP2 | 314 | 375 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | SUPERFAMILY | DNA-binding domain | 214 | 281 | IPR016177 | GO:0003677 | |
Blo06g00028 | 457 | SUPERFAMILY | DNA-binding domain | 314 | 374 | IPR016177 | GO:0003677 | |
Blo06g00028 | 457 | Gene3D | AP2/ERF domain | 315 | 375 | IPR036955 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | Gene3D | AP2/ERF domain | 214 | 281 | IPR036955 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 152 | 422 | - | - | |
Blo06g00028 | 457 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 1 | 109 | - | - | |
Blo06g00028 | 457 | CDD | AP2 | 214 | 280 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | Pfam | AP2 domain | 315 | 365 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | Pfam | AP2 domain | 215 | 271 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 152 | 422 | - | - | |
Blo06g00028 | 457 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 109 | - | - | |
Blo06g00028 | 457 | SMART | rav1_2 | 215 | 285 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | SMART | rav1_2 | 315 | 379 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | ProSiteProfiles | AP2/ERF domain profile. | 215 | 279 | IPR001471 | GO:0003700|GO:0006355 | |
Blo06g00028 | 457 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Blo06g00028 | 457 | ProSiteProfiles | AP2/ERF domain profile. | 315 | 373 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00028 | Blo-Chr6:526846 | Blo12g00998 | Blo-Chr12:27991434 | 7.59E-156 | dispersed | |
Blo06g00028 | Blo-Chr6:526846 | Blo01g01486 | Blo-Chr1:54305900 | 2.60E-158 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12441 | PF00847 | AP2 | 1.10E-07 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo06g00028 | K09285 | - | csin:114276235 | 535.798 |