Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00035 ATGGATTCTGATGATAATCGCCGTAAAGGCTTTTTTCTAGCCTTGGGATTGGTCAGTGAAGAAGAAACCACCTCGAAAATCGTGAACCATGGCCCGGTTTTGAAATCGAGCTTGAGCTTTGTGGGATCTAACGGCGGTTCCAAGCCGTCTTTGAGGTTGGGTCTTTCTGGTGATGGTTTGTGTAGGCAGGCTTCTCCCCTAAGCCCTGTTTCTTCTTTCTGTAGCAGTAGGGCCAAGAGAGAGAGGGAATTTAGCACTGAGGATATGGAGGCAGAGAAAGTTTCTTCAAGAGTTAGTGATGAAGATGAAGATGGCTCTAATTACAGAAAGAAACTTCGTTTAACTAAAGAACAGTCTGCTCTTTTAGAAGACAGCTTTAAACAGCACAGCACTCTTAACCCGAAGCAAAAGCAAGCTTTAGCAAGACAGCTAAATCTTCGACCTCGACAAGTTGAAGTTTGGTTTCAGAACAGAAGAGCCAGGACGAAGCTGAAGCAAACTGAGGTAGACTGTGAGTTCTTGAAGAAATGCTGCGAAAATCTGGCGGAAGAAAACAGGAGACTGCAAAAGGAAGTAGAAGAGCTAAAAGCTGTGAAACGAGCTCACCCATTTTACGTGCAAATGCCAGCAACTGCAGCGACGCTAAGTCTCTGCCCTTCTTGCGAAAGGGTCGGTAGAGACGACCATGGAAGACCCGCCGCTAATTCTTCTGAGCTACCATTTTCAGTCGCTTCTTCTTCTTCTAACCCTCGTTTCTTTAACCCTTTTACCAACTCCTCTGCAGCTTGTTAG 792 45.58 MDSDDNRRKGFFLALGLVSEEETTSKIVNHGPVLKSSLSFVGSNGGSKPSLRLGLSGDGLCRQASPLSPVSSFCSSRAKREREFSTEDMEAEKVSSRVSDEDEDGSNYRKKLRLTKEQSALLEDSFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCENLAEENRRLQKEVEELKAVKRAHPFYVQMPATAATLSLCPSCERVGRDDHGRPAANSSELPFSVASSSSNPRFFNPFTNSSAAC 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 723435 724432 + BLOR16618 Blo06g00035 61328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00035 263 MobiDBLite consensus disorder prediction 84 105 - -
Blo06g00035 263 Pfam Homeobox associated leucine zipper 165 198 IPR003106 GO:0006355|GO:0043565
Blo06g00035 263 SUPERFAMILY Homeodomain-like 96 166 IPR009057 -
Blo06g00035 263 ProSiteProfiles 'Homeobox' domain profile. 105 165 IPR001356 GO:0003677
Blo06g00035 263 Pfam Homeodomain 109 163 IPR001356 GO:0003677
Blo06g00035 263 CDD homeodomain 109 166 IPR001356 GO:0003677
Blo06g00035 263 SMART HOX_1 107 169 IPR001356 GO:0003677
Blo06g00035 263 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22-LIKE 7 263 - -
Blo06g00035 263 SMART halz 165 208 IPR003106 GO:0006355|GO:0043565
Blo06g00035 263 ProSitePatterns 'Homeobox' domain signature. 140 163 IPR017970 GO:0000981|GO:0006355
Blo06g00035 263 Coils Coil 164 201 - -
Blo06g00035 263 MobiDBLite consensus disorder prediction 227 247 - -
Blo06g00035 263 Gene3D - 113 163 - -
Blo06g00035 263 PANTHER - 7 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01480 Blo-Chr1:54162228 Blo06g00035 Blo-Chr6:723435 9.87E-59 dispersed
Blo05g00182 Blo-Chr5:1733002 Blo06g00035 Blo-Chr6:723435 6.56E-64 dispersed
Blo06g00035 Blo-Chr6:723435 Blo06g00622 Blo-Chr6:29128151 6.52E-61 dispersed
Blo04g01103 Blo-Chr4:17324118 Blo06g00035 Blo-Chr6:723435 3.78E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12443 PF00046 Homeodomain 2.10E-16 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00035 K09338 - tcc:18611354 298.13