Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00036 ATGGTGGTTTCGCTGGGCCAAGACTACGAGATTCTCCTGCGGGTCAAGAATTCTCAGCTGGACGATCCCCAAGGAAGTCTTCAGAATTGGGTTCCTAACAGTGACAACAATCCCTGCAGTTGGAGCGGCGTTGCCTGCGCTTCTCCCAATACTTCTGTTGTTTCAATCGATCTATCCAGTTTTAACATATTCGGTGGGTTTCCCTTTGATTTCTGCCGGATTTCGACCTTGCTGAATCTGTCTCTCGCCAACAATTACATCAATGGTTCGCTGTTATCTCCCTCTCTCACTCTCTGTTCAAACCTGCGTCTATTGAACCTCAGCAGTAACCTTCTTGTCCGTGAGTTGCCGGAGTTTTCTCCGGGATTTAATGAACTTCTGATTCTGGATCTGTCGAGTAACAACTTCACCGCAGATATCCCGGCCAGTTTCGGCCGATTTCCGGAGCTACGAGCTCTCGTTCTCTCCAATAATTTGCTCTATGGCTCCATTCCTTCGTCCTTATGCAATCTCACCAAGTTAACTCGGCTAGAGCTCGCTTTCAATCCTTCCATGGCCGGTCCTTTACCTTCGGATATTGGAAATCTCACCAAGCTTGAAAATCTGTTTCTGAGGTCCACTAATCTCGTCGGACCTATCCCGGACTCCATCGGAAATCTTGTGTTGCTCCACAACCTCGATCTATCTCAAAATTCTCTCTCTGGAGAAATTCCTCATTCGATTGGTGGGTTGCTGAATGTGGTTCAGATGGAGCTCTATGAAAACCAAATCTCCGGCGAACTGCCGCCAACCTTGGGCAATTTGTCTAACCTCCTTAGAATTGACCTCTCGCAAAACAATCTCACCGGGAAGTTGCCCGCCAACCTTGCAGGATTGCCGCTCGAGTCTTTGAATCTAAACGATAATTTTCTCATCGGTGAAATCCCATTTAGTTTAGCCTCTAATCCTAATCTAGTACAACTGAAGCTTTTTAATAACAGCTTCTCCGGGCAATTACCGGAATACCTCGGCCGGAATTCCGAACTGGAGGATTTCGATGTCTCTACCAACAGTTTCTCCGGTGGTTTACCCAAGTATCTCTGTTACAGGAAAAGCCTTCAACGTTTAGTCACTTTTAGCAACGGCTTCTCCGGGAGCTTGCCGGAATCCTATGGCGACTGCAGCTCTCTCAATTATGTGAGAATCGAGAACAACCAACTTTCCGGAGATATTCCGGCCAGTTTCTGGAGCTTTCGTGGGCTCCAACATCTTCAGCTGGAAAATAATCGATTTGAAGGCCCACTCTTACCTTCAATTTCTGGCGCTCGAGAACTCACCGCTTTTCTGATATCTGGTAACAACTTCTCCGGCGAATTGCCTCCCGAAATTTGCCAATTGGGTAAACTCGCACGTTTAGACGTGAGCAGAAACGGATTTTCCGGTGAACTTCCGTCTTGTATAACCGAACTGAAGAAACTGCAGACGCTTGATATGCAGGACAACATGTTTTCCGGCGAGATACCGAAAACAGTTGTTTCTTGGCAAGAGTTGGCCGAGTTAAATCTTTCAAAAAATCGCTTGACCGGAGAGATTCCAGCCCAACTAGGAGATTTGCCGTCCTTAACGTACTTAGACCTGTCAGAAAATTTACTTACCGGGGATATCCCATCGGAGTTGACGAAGCTAAAACTTAACCAGTTCAACTTATCGGATAACAGACTATCCGGGCAAGTTCCTTCTGGTTTCAACGACGAACTGTATCTTCCGAGCCTAATGGGCAACCCGAATCTATGCAGCCCCGACTTGAACCCGCTACCCCTTTGCCCGAAGTCCAAACCCGCTACTTTCTATATAGTCATTGTCTTATCTGTACTCGCTTTCCTCCTTCTCGGATCTCTCGTGTGGGTCCTCAAATCCAAGTGGCGGGTCTTCGCCGGAAGACCCAAAAGCTCCTGGAAGGTCACCATCTTTCAGCGAGTCGGGTTCAACGAGGAAGACATTATTAGGAATCTAACAACCAAGAACTTGATCGGAGAAGGAGGGTCTGGCCGCGTCTACAAAGTCCAGCTCAAAACGGGTCAAACGGTAGCTGTGAAAAGATTATGGGGAGGAAATAAAGAAGCCGACAATGAATCCGTCTTCAAATCGGAGCTGGAGACTCTGGGCCGGATCCGCCATGCGAACATCCTGAAGATTCTCCTCAGCTGCAGCTCCGTCGACGGGAGTCGCATCCTGGTTTTCGAATACATGGAAAACGGAAGCTTAGGCGACGCATTGCATGGCGAAAAAAGCGGGGCATTTCTGGATTGGCCGACGCGGTCAAGTATAGCCGTCGGTGCGGCTCAAGGATTGGCTTATCTGCACCATGACTGTGATCCGGCGATCGTTCATCGGGACGTGAAGAGCAATAACATACTTTTGGACGAGGAATTTGTTCCCCGGGTGGCTGATTTCGGAATAGCCAAGACCTTGCAGCGGAAGGTGGGCGGCGTCCGTGGCGATGGTTCAATGTCTCGAGTTGCGGGGTCGTACGGCTACATTGCTCCCGAGTATGGGTACACATTGAAAGTGAACGAGAAGAGCGACGTTTATAGCTTTGGAGTTCTGTTAATGGAGTTAGTGACGGGAAAGAGGCCGAACGACGCTTTCTTCGGGGAGAGCAAGGACATGGTGAAGTGGGTTACAGAGGCAGCTTGGTCATCACCTTCGTCATATTCTCCGTCATTTTCAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGGAGGCATGGAAGAAGCTTGAATCAAATTATAGATCCAAAACTGGACCAATCCAGCAGCAATTATGAAGAGATTGAGAAGGTTATAAACGTGGCTCTTCTCTGCACCTCTGCATTGCCCATCAACAGGCCGTCCATGAGACAAGTAGTGGAGATGCTTAAAGATCAGAAGAGAAACCTGGTGCCAACTGATGAGCTAAATGTTAAGAAGTAA 2949 48.12 MVVSLGQDYEILLRVKNSQLDDPQGSLQNWVPNSDNNPCSWSGVACASPNTSVVSIDLSSFNIFGGFPFDFCRISTLLNLSLANNYINGSLLSPSLTLCSNLRLLNLSSNLLVRELPEFSPGFNELLILDLSSNNFTADIPASFGRFPELRALVLSNNLLYGSIPSSLCNLTKLTRLELAFNPSMAGPLPSDIGNLTKLENLFLRSTNLVGPIPDSIGNLVLLHNLDLSQNSLSGEIPHSIGGLLNVVQMELYENQISGELPPTLGNLSNLLRIDLSQNNLTGKLPANLAGLPLESLNLNDNFLIGEIPFSLASNPNLVQLKLFNNSFSGQLPEYLGRNSELEDFDVSTNSFSGGLPKYLCYRKSLQRLVTFSNGFSGSLPESYGDCSSLNYVRIENNQLSGDIPASFWSFRGLQHLQLENNRFEGPLLPSISGARELTAFLISGNNFSGELPPEICQLGKLARLDVSRNGFSGELPSCITELKKLQTLDMQDNMFSGEIPKTVVSWQELAELNLSKNRLTGEIPAQLGDLPSLTYLDLSENLLTGDIPSELTKLKLNQFNLSDNRLSGQVPSGFNDELYLPSLMGNPNLCSPDLNPLPLCPKSKPATFYIVIVLSVLAFLLLGSLVWVLKSKWRVFAGRPKSSWKVTIFQRVGFNEEDIIRNLTTKNLIGEGGSGRVYKVQLKTGQTVAVKRLWGGNKEADNESVFKSELETLGRIRHANILKILLSCSSVDGSRILVFEYMENGSLGDALHGEKSGAFLDWPTRSSIAVGAAQGLAYLHHDCDPAIVHRDVKSNNILLDEEFVPRVADFGIAKTLQRKVGGVRGDGSMSRVAGSYGYIAPEYGYTLKVNEKSDVYSFGVLLMELVTGKRPNDAFFGESKDMVKWVTEAAWSSPSSYSPSFSEEEEEEEEEGRHGRSLNQIIDPKLDQSSSNYEEIEKVINVALLCTSALPINRPSMRQVVEMLKDQKRNLVPTDELNVKK 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 728171 731195 - BLOR16619 Blo06g00036 61329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00036 982 SUPERFAMILY Protein kinase-like (PK-like) 656 965 IPR011009 -
Blo06g00036 982 PRINTS Leucine-rich repeat signature 531 544 - -
Blo06g00036 982 PRINTS Leucine-rich repeat signature 223 236 - -
Blo06g00036 982 MobiDBLite consensus disorder prediction 893 925 - -
Blo06g00036 982 Pfam Protein kinase domain 666 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00036 982 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Blo06g00036 982 Pfam Leucine rich repeat 509 567 IPR001611 GO:0005515
Blo06g00036 982 Pfam Leucine rich repeat 126 182 IPR001611 GO:0005515
Blo06g00036 982 ProSiteProfiles Leucine-rich repeat profile. 533 556 IPR001611 GO:0005515
Blo06g00036 982 Gene3D Ribonuclease Inhibitor 159 262 IPR032675 -
Blo06g00036 982 SUPERFAMILY RNI-like 48 369 - -
Blo06g00036 982 SMART LRR_typ_2 268 292 IPR003591 -
Blo06g00036 982 SMART LRR_typ_2 531 555 IPR003591 -
Blo06g00036 982 SMART LRR_typ_2 147 171 IPR003591 -
Blo06g00036 982 SMART LRR_typ_2 459 483 IPR003591 -
Blo06g00036 982 SMART LRR_typ_2 220 244 IPR003591 -
Blo06g00036 982 Gene3D Ribonuclease Inhibitor 273 604 IPR032675 -
Blo06g00036 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 971 - -
Blo06g00036 982 Pfam Leucine rich repeat N-terminal domain 6 46 IPR013210 -
Blo06g00036 982 Gene3D Transferase(Phosphotransferase) domain 1 743 979 - -
Blo06g00036 982 SUPERFAMILY L domain-like 294 599 - -
Blo06g00036 982 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 2 971 - -
Blo06g00036 982 Gene3D Ribonuclease Inhibitor 4 158 IPR032675 -
Blo06g00036 982 Gene3D Phosphorylase Kinase; domain 1 643 742 - -
Blo06g00036 982 SMART serkin_6 664 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00036 982 ProSiteProfiles Protein kinase domain profile. 664 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00036 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00036 Blo-Chr6:728171 Blo07g01053 Blo-Chr7:30338810 0 dispersed
Blo06g00036 Blo-Chr6:728171 Blo06g00039 Blo-Chr6:930208 0 proximal
Blo04g00645 Blo-Chr4:5653016 Blo06g00036 Blo-Chr6:728171 0 transposed
Blo08g00217 Blo-Chr8:2553633 Blo06g00036 Blo-Chr6:728171 0 transposed
Blo16g00327 Blo-Chr16:8475280 Blo06g00036 Blo-Chr6:728171 0 wgd
Blo05g00722 Blo-Chr5:25244562 Blo06g00036 Blo-Chr6:728171 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84309 PF00069 Pkinase 4.50E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00036 - - zju:107425028 1199.5