Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo06g00041 | ATGGCCTCTGGCCATTCGCTGGAAATAGAGCCCGACGAGAGAGAGAACAGACAGCGAGAGAGGGAGAGGGAGATTGACGAAGGAGGCCGGCGATCGACGATGAGGGCGAGCCTTTTTCGTAGCGAGGGGACGACTCCGACGGACTCGAGTTCATTCCGGCTTGCTGTGCGTCACGGGTTACGAGCTAGGGCTCGATTTTATGGGTGCGGGATGGTTCGACGGCCATGGCTTCGGGTCATTGGTGCTACAGCGGTGTCCGACGAATGTGCAGCCAGAAATTTGTGGGGCGCTCACGGGCTACGGCGAGGAGGCAGTGGACCGACGGTGATGAATGGCTGTGGCAGGGGGAGCTTCGGTTCGCTGGGACTCGGCTGGATACAAGGATTGTCTGGCATGCAGAGTGCAAAACTCTGCCTTTCCAGGAATGGCAGAGTGTTGTTGGCTGGAGGTTTTGACGATTTCATGGACTTTGAAACTATTCCTGGTAATAGTGCTCTGCTGGTAAGAAGAGTAGTCGTCATCGAGGCTCAAATGGAGGAAGATTCTTCGTTTTTTGATCGATATTCTCTTGACTACAATCTGGATGAGTTGAGTTTTCAGTCAGTTTCTACTGAAAGCTACCCAAACAGCACGACTAGCTTCAATGGCTGCTCAGCTGCAACGTTTCCTCCATTAATAGCAGAATCTGAAAAACCAGCAAAGCTGCTCAAATCCAACGGCTGGAAACCATCGAAGCCCGCTTCTTCTCCCTCCTCTCAAATCATCTCCTTCGGAAATTCAAATTCGTCTCAGAAATATTCTGGTTTAGACACTACTTTAAAGCCTAATTTTGAGATGACCACCTATGCTGCTCCCGTCGACCATGGATCGAGGGAGAACCTCCAGAGTCTGACGAAAAATGAAAGAAGTAGGAGGGGTTTTGGGGCAGTCAGCAGAAGCCCTTTGCTTGCTGAAGATCATGTTTTAGCTGAGAGAAAGAGGAGAGAGAAACTCAGCCAGAGGTTTGTCTCTCTTTCTGCTCTAATTCCTGGCCTAAAGAAGAATGATAAGGCTTCTGTTCTTGGAGACGCCATTCAACACGTGAAGCAGCTGCAGGAACGTTTGAGGAAGCTGGAGGAACAAACAACGAAGAAGACGATGGAATCCGTGGTTTTGGTGAAGAAAGCTCGTCTTTTTGCAGATGATGATTCTTCATCGGGCGAACAGTCTACTGGCTTTTCCGACCAACGCCTCCCGGAAATCGAAGCAAGAGTTTCCGGCAAGGACGTTCTCGTTCGAATTCACTGTGAAAAACAAAAGGGATTGTTGTCACATATATTGAACGAAGTGCAGAAGCTTCATCTGTCAGAAGTTCACAGCAGTGTCTTCAAATTTGGGACCTCTACTCTTGATATCACCATTGTTGCTAAGATGGAAGATGGATTCTGTATGACAGTGAAGGAAATAGCGAAGAATCTGAGAACCGCTTTGCTGAACTTCATTTCTGTTGGAGTTTGA | 1497 | 48.7 | MASGHSLEIEPDERENRQREREREIDEGGRRSTMRASLFRSEGTTPTDSSSFRLAVRHGLRARARFYGCGMVRRPWLRVIGATAVSDECAARNLWGAHGLRRGGSGPTVMNGCGRGSFGSLGLGWIQGLSGMQSAKLCLSRNGRVLLAGGFDDFMDFETIPGNSALLVRRVVVIEAQMEEDSSFFDRYSLDYNLDELSFQSVSTESYPNSTTSFNGCSAATFPPLIAESEKPAKLLKSNGWKPSKPASSPSSQIISFGNSNSSQKYSGLDTTLKPNFEMTTYAAPVDHGSRENLQSLTKNERSRRGFGAVSRSPLLAEDHVLAERKRREKLSQRFVSLSALIPGLKKNDKASVLGDAIQHVKQLQERLRKLEEQTTKKTMESVVLVKKARLFADDDSSSGEQSTGFSDQRLPEIEARVSGKDVLVRIHCEKQKGLLSHILNEVQKLHLSEVHSSVFKFGTSTLDITIVAKMEDGFCMTVKEIAKNLRTALLNFISVGV | 498 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 985921 | 997077 | - | BLOR16624 | Blo06g00041 | 61334 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo06g00041 | 498 | Coils | Coil | 354 | 381 | - | - | |
Blo06g00041 | 498 | MobiDBLite | consensus disorder prediction | 236 | 259 | - | - | |
Blo06g00041 | 498 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 315 | 364 | IPR011598 | GO:0046983 | |
Blo06g00041 | 498 | SMART | finulus | 321 | 370 | IPR011598 | GO:0046983 | |
Blo06g00041 | 498 | PANTHER | TRANSCRIPTION FACTOR BHLH18-LIKE | 175 | 493 | - | - | |
Blo06g00041 | 498 | Pfam | Helix-loop-helix DNA-binding domain | 320 | 365 | IPR011598 | GO:0046983 | |
Blo06g00041 | 498 | MobiDBLite | consensus disorder prediction | 7 | 33 | - | - | |
Blo06g00041 | 498 | PANTHER | BHLH TRANSCRIPTION FACTOR | 175 | 493 | - | - | |
Blo06g00041 | 498 | CDD | bHLH_AtNAI1_like | 316 | 388 | - | - | |
Blo06g00041 | 498 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Blo06g00041 | 498 | Gene3D | - | 317 | 386 | IPR036638 | GO:0046983 | |
Blo06g00041 | 498 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 320 | 382 | IPR036638 | GO:0046983 | |
Blo06g00041 | 498 | MobiDBLite | consensus disorder prediction | 242 | 259 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00041 | Blo-Chr6:985921 | Blo02g00993 | Blo-Chr2:38538853 | 1.62E-18 | dispersed | |
Blo06g00041 | Blo-Chr6:985921 | Blo06g00042 | Blo-Chr6:1061144 | 0 | tandem | |
Blo16g00325 | Blo-Chr16:8400805 | Blo06g00041 | Blo-Chr6:985921 | 1.00E-76 | wgd | |
Blo05g00723 | Blo-Chr5:25340011 | Blo06g00041 | Blo-Chr6:985921 | 1.22E-161 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12444 | PF00010 | HLH | 5.40E-09 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo06g00041 | - | - | qsu:112005400 | 285.419 |