Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo06g00063 | ATGGAAACCTCCACTCATGTAGAGATGAAGTCGGTTAGTCCACACCGATCAACAGATGTATCCCTGCTCTTAGTCTTCAATGTCAGAAAAGACAGAGATTACTTGACAGTGGTGGTGACACCCTTGATGGAAACCTTCACCCATGTAGGGATGAAGTCGGTTAAGCCATACCAACAGATGTATCCTTTCTCTGAAAACTCCATTACATGTTTTGATGAAGCTAATAGTAATGCCACTGTTGGTCTGGGGTTAACCCATTCTCTTTCTGGCAAAAACTGGAGTTTTGACCTAAATGGATCCGATTCTTTGATGGCATTTCCATTACAGTGCGGAGAGAGAATAAGAGCAATGGTTGAGAGAGAAAGTGAGCATTTTCCGAAACACGATTACCTCGAGAGATTACGAGTTGGGGATTTGAACTTAGGCGTTAGGAGAGAAGCCCTTGATTGGATTTGGAAGGTTCAAGCTTACTACAATTTCAGCCCACAAACTGTATATCTCTCTGTGAACTACTTGGATCGGTTCCTTTCTGTCTATCAATTTCCTATGGATCAAAGCTGGATTGTGCAGTTGATATCTGTAGCTTGCGTATCTCTAGCAGCCAAAATGGAAGAAACTGAAGTGCCTCTATCTGTAAATTTCCAGATTGGAGAGCCTAAATTTGTGTTTGAAGCTAAAACTATTCAAAGAATGGAGCTTCTTGTTCTCAGCACCTTAAAATGGAGAATGCAAGCTGTAACACCTTTCTCTTTCATTGACTACTTCCTCAGCAAGATCAATATGGGTCGGAAGCCGTCTGATTTGTCCATCTCTCGATCAATACAACTCATACTCAACACAATCAATGGTATAGATTGTTTGGAATTCCGACCTTCTGAAATTGCTGCCGCTGTGGCAGCTTCCATATCAGTTGAATTGCAAGGAATATACATTAACAAGGCAATCTCTGGCTTTGAGCATGTACACGAGGGAAGACTGAAGAAGTGTATCGAATTGATAACGAGGCTTTCATCGGTTAGTGGGTCTGGGAACGGAGAGAGAGGGTCGGCTGCAGCCTCTTCTGTCCCTCAAAGTCCAGTTGGGGTTCTAGATGCTGCATTTTGGTGCTATAAAAGTGATGAACCCATGGCTCATTCTTCACATAATGATCCAAACATCAAGAGAAGAAGATTAAGTTCATCTGAGGTGGATTCCAGCTCATGA | 1203 | 42.48 | METSTHVEMKSVSPHRSTDVSLLLVFNVRKDRDYLTVVVTPLMETFTHVGMKSVKPYQQMYPFSENSITCFDEANSNATVGLGLTHSLSGKNWSFDLNGSDSLMAFPLQCGERIRAMVERESEHFPKHDYLERLRVGDLNLGVRREALDWIWKVQAYYNFSPQTVYLSVNYLDRFLSVYQFPMDQSWIVQLISVACVSLAAKMEETEVPLSVNFQIGEPKFVFEAKTIQRMELLVLSTLKWRMQAVTPFSFIDYFLSKINMGRKPSDLSISRSIQLILNTINGIDCLEFRPSEIAAAVAASISVELQGIYINKAISGFEHVHEGRLKKCIELITRLSSVSGSGNGERGSAAASSVPQSPVGVLDAAFWCYKSDEPMAHSSHNDPNIKRRRLSSSEVDSSS | 400 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1806417 | 1809687 | + | BLOR16646 | Blo06g00063 | 61356 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo06g00063 | 400 | CDD | CYCLIN | 144 | 236 | IPR013763 | - | |
| Blo06g00063 | 400 | SUPERFAMILY | Cyclin-like | 228 | 337 | IPR036915 | - | |
| Blo06g00063 | 400 | SMART | cyclin_7 | 149 | 237 | IPR013763 | - | |
| Blo06g00063 | 400 | Pfam | Cyclin, C-terminal domain | 246 | 338 | IPR004367 | - | |
| Blo06g00063 | 400 | MobiDBLite | consensus disorder prediction | 376 | 394 | - | - | |
| Blo06g00063 | 400 | Gene3D | - | 127 | 244 | - | - | |
| Blo06g00063 | 400 | SUPERFAMILY | Cyclin-like | 103 | 243 | IPR036915 | - | |
| Blo06g00063 | 400 | PANTHER | CYCLIN-D4-1-LIKE | 98 | 392 | - | - | |
| Blo06g00063 | 400 | Gene3D | - | 116 | 332 | - | - | |
| Blo06g00063 | 400 | SMART | Cyclin_C_2 | 246 | 358 | IPR004367 | - | |
| Blo06g00063 | 400 | ProSitePatterns | Cyclins signature. | 144 | 175 | IPR006671 | - | |
| Blo06g00063 | 400 | MobiDBLite | consensus disorder prediction | 376 | 400 | - | - | |
| Blo06g00063 | 400 | Pfam | Cyclin, N-terminal domain | 115 | 243 | IPR006671 | - | |
| Blo06g00063 | 400 | PANTHER | CYCLINS | 98 | 392 | IPR039361 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo06g00063 | Blo-Chr6:1806417 | Blo11g00015 | Blo-Chr11:137462 | 7.88E-78 | dispersed | |
| Blo14g00353 | Blo-Chr14:3840733 | Blo06g00063 | Blo-Chr6:1806417 | 8.98E-41 | dispersed | |
| Blo17g00102 | Blo-Chr17:913786 | Blo06g00063 | Blo-Chr6:1806417 | 5.11E-87 | wgd | |
| Blo04g01131 | Blo-Chr4:18443841 | Blo06g00063 | Blo-Chr6:1806417 | 8.06E-104 | wgd | |
| Blo05g00746 | Blo-Chr5:26607932 | Blo06g00063 | Blo-Chr6:1806417 | 2.27E-18 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo06g00063 | K18810 | - | qsu:111991591 | 368.237 |