Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo06g00064 | ATGGAGTTCAACGATCAAGGGGAGCATGACGAAGAGATGGCGAGCTACGACTCGCTTGGGAACTCGGTGTCGAGTGTGAAAATAGCGAACTTGGAAGCTCTGGCTCAGCAGAATAGGAAGCTGAGGTACAGAGAGTGCCTGAAGAATCACGCTGTCGGCATCTGCGGCCACGCCCTCGACGGCTGCGGCGAGTTTATGCCTGGCGGAGCAGAAGGAACGCTCGACGGACTCAAATGCGCTGCCTGCAACTGCCACCGTAATTTCCACAGGAAAGAGACGGAAGGCGGAATCGGAGTCGGAGAGCATTTCCTTCTCGCCCAACACCCTCACCTGCAGTTCTCGCCTCACTACCGAACTCCGGCGGGAAACCTTCACGTGGATCATCACCAGAGCCTGCTGGCGCTATCGTCGGCTTCTGGCGGAGGCGGAATCCATAGCCGGGAGGTTCAGGAGGACATTCCCAACCCCAACGACGGCCATGGTGGCGGCCGAAGCCGAGGGTTCGGGAAGAAAAGATACAGATCAAAGTTTAGTCAAGATCAGAAAGAGAGACTGTTGGACTTAGCAGAAAGAGTCGGATGGAGGATTCAGAAAGACGATGAAGCCATTGTTCGGCAGTTCTGCAACCAAACAGGGGTGAAGCGTCAGAGACATGAGAGCCAATCAGCCCATACAGCAGCCTCTCCATCGTCCTCTAAAGCAACAGAAGCCACATACTACTTCACCAATGTCGTAAGCCGCAAACCTGCTCCTCCAGCCGTGCCTACCGAGGTGCAGGAGACCAATGAGTCAGAGCCTCCACCCCTTAGAACTATGCGCATGTCTCAGGATTTGATAGACATCTTCAAGAAGTATGTTGCCCCAAATACTCAGAAGAACATGGAGATGTGCGCAGTTCTTTCAGGGAAAGCTGATCAGCGATGA | 924 | 54.11 | MEFNDQGEHDEEMASYDSLGNSVSSVKIANLEALAQQNRKLRYRECLKNHAVGICGHALDGCGEFMPGGAEGTLDGLKCAACNCHRNFHRKETEGGIGVGEHFLLAQHPHLQFSPHYRTPAGNLHVDHHQSLLALSSASGGGGIHSREVQEDIPNPNDGHGGGRSRGFGKKRYRSKFSQDQKERLLDLAERVGWRIQKDDEAIVRQFCNQTGVKRQRHESQSAHTAASPSSSKATEATYYFTNVVSRKPAPPAVPTEVQETNESEPPPLRTMRMSQDLIDIFKKYVAPNTQKNMEMCAVLSGKADQR | 307 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1846331 | 1849592 | - | BLOR16647 | Blo06g00064 | 61357 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo06g00064 | 307 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 42 | 92 | IPR006456 | - | |
| Blo06g00064 | 307 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 1 | 26 | 216 | - | - | |
| Blo06g00064 | 307 | Gene3D | - | 157 | 219 | - | - | |
| Blo06g00064 | 307 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 26 | 216 | - | - | |
| Blo06g00064 | 307 | MobiDBLite | consensus disorder prediction | 137 | 176 | - | - | |
| Blo06g00064 | 307 | Pfam | ZF-HD protein dimerisation region | 41 | 93 | IPR006456 | - | |
| Blo06g00064 | 307 | SUPERFAMILY | Homeodomain-like | 157 | 216 | IPR009057 | - | |
| Blo06g00064 | 307 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 43 | 92 | IPR006456 | - | |
| Blo06g00064 | 307 | MobiDBLite | consensus disorder prediction | 247 | 270 | - | - | |
| Blo06g00064 | 307 | MobiDBLite | consensus disorder prediction | 212 | 234 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo06g00064 | Blo-Chr6:1846331 | Blo16g00046 | Blo-Chr16:1874806 | 4.78E-44 | dispersed | |
| Blo17g00820 | Blo-Chr17:26498070 | Blo06g00064 | Blo-Chr6:1846331 | 7.81E-39 | transposed | |
| Blo05g00749 | Blo-Chr5:26862729 | Blo06g00064 | Blo-Chr6:1846331 | 4.36E-121 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12448 | PF04770 | ZF-HD_dimer | 1.40E-26 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo06g00064 | - | - | vri:117919209 | 259.996 |