Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo06g00128 | ATGCCGACTGAGTTAGACAATTCCTCTACTGCTTCAGGCGAAGCTAGCGTTTCCTCCTCTGGAAATGAACCACCACCTCCAAAATTATCAGCTAAGAAAAAACGAAACTTACCAGGAATGCCAGATCCAGATGCAGAGGTAATTGCTCTGTCTCCGAAGACTCTCATGGCGACGAATCGATTCGTTTGTGAAATATGCAACAAGGGTTTTCAAAGGGATCAAAATTTGCAACTGCATCGAAGAGGTCATAATCTACCATGGAAGCTGAAGCAGCGATCGAGTAAGGAGGTAAAGAAGAGAGTCTACGTCTGCCCGGAGCCGTCGTGTGTCCACCACGATCCATCTAGAGCTCTGGGCGATCTCACTGGAATAAAGAAGCATTTCTGCAGAAAACACGGCGAGAAGAAGTGGAAATGCGACAAGTGTTCGAAGAAATACGCAGTTCAGTCGGACTGGAAAGCTCATTTCAAAATCTGCGGCACCAGAGAGTATAAGTGCGATTGCGGAACGTTGTTTTCCAGGAGGGATAGCTTCATCACGCACAGAGCTTTCTGCGATGCGTTGGCTGAGGAGAGCGCCAGAGCTCGAACTCATCCTCAACCCCCAACAATGGCAAATCCAAATTCAAAGTCCGACCCAAAAGTTCCACCATCCCCATCTTCTTCAGCTCCGCCGCGGCCTGCTCCAGCAGAGTCAACCGGTGCTGCCGTCTCCTCAGTTTTTCCGATTCAAAGTCAAGAGCTGCTGGAAAATCCCCCGCAAATTATCGAAGAAGTAGTGGCAGCTGGAGCAGGATTAAATGCGAGCTGCAGCAGCAGTTCGAGCCCGAGCAGCCATAGCTGCTCGAGCAGTAGTGTATTTGCGAGCATGTTTGCTTCCTCAAATGCAGCAGTGAGCTTACCACCCCCTCAACCTCCTGCATTTACCGACCTGATAAGAGCCATGGGAAGGTCCAATCGGCCAGCAGAGCTCACTCTATCTTCACCCTCCGAACCCATTTCTCTCTGCCTCTCAACTAGCCATCACAAGCCATCAACTTTCGGGGCTGCAGGCCAATATGCTCCTCCACCTCCACAGCCAGCTATGTCAGCCACAGCCCTTCTTCAGAAAGCTGCTCAAATGGGGGCTGCAGCCACTAATGCATCATTTCTTCGAGGGTTTGGAGTAGTGGCCTCAACTTCGTGCTCTACGCAACAAGAGAGCTTGCAATGGAGTCAGAGGCAAGTCGACCCGGATTCCGCCTCGATAGCTGCGGGGCTTGGCCTGGGACTTCCTTATGATGGAAGTTCTGGATTGAAGGAACTGATGATGGGAAATCATTCCATCTTTGGTCCTAAGCAAACTACACTTGATTTTCTAGGTCTTGGAATGGCAGCCGGTGGAAGTCCTAGTGGCAGCCTATCGGCACTAATCACGTCCATCGGTGGCGGTCTAGATGTCACAGCAGCCGCCTCCTTTGGAGGTGGTGAATTCTCCAGCAAAGACATTAGTAGAAACTCT | 1500 | 50.67 | MPTELDNSSTASGEASVSSSGNEPPPPKLSAKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVKKRVYVCPEPSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHFKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARARTHPQPPTMANPNSKSDPKVPPSPSSSAPPRPAPAESTGAAVSSVFPIQSQELLENPPQIIEEVVAAGAGLNASCSSSSSPSSHSCSSSSVFASMFASSNAAVSLPPPQPPAFTDLIRAMGRSNRPAELTLSSPSEPISLCLSTSHHKPSTFGAAGQYAPPPPQPAMSATALLQKAAQMGAAATNASFLRGFGVVASTSCSTQQESLQWSQRQVDPDSASIAAGLGLGLPYDGSSGLKELMMGNHSIFGPKQTTLDFLGLGMAAGGSPSGSLSALITSIGGGLDVTAAASFGGGEFSSKDISRNS | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5176019 | 5178139 | - | BLOR16711 | Blo06g00128 | 61421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo06g00128 | 500 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 7 | 500 | - | - | |
Blo06g00128 | 500 | SUPERFAMILY | beta-beta-alpha zinc fingers | 60 | 157 | IPR036236 | - | |
Blo06g00128 | 500 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Blo06g00128 | 500 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 61 | 83 | IPR013087 | - | |
Blo06g00128 | 500 | SMART | c2h2final6 | 61 | 83 | IPR013087 | - | |
Blo06g00128 | 500 | SMART | c2h2final6 | 137 | 157 | IPR013087 | - | |
Blo06g00128 | 500 | SMART | c2h2final6 | 102 | 132 | IPR013087 | - | |
Blo06g00128 | 500 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Blo06g00128 | 500 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 63 | 83 | IPR013087 | - | |
Blo06g00128 | 500 | Gene3D | Classic Zinc Finger | 41 | 107 | - | - | |
Blo06g00128 | 500 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 2-LIKE | 7 | 500 | - | - | |
Blo06g00128 | 500 | MobiDBLite | consensus disorder prediction | 193 | 235 | - | - | |
Blo06g00128 | 500 | Gene3D | Classic Zinc Finger | 115 | 195 | - | - | |
Blo06g00128 | 500 | MobiDBLite | consensus disorder prediction | 212 | 226 | - | - | |
Blo06g00128 | 500 | Pfam | Zinc finger, C2H2 type | 61 | 83 | IPR013087 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo05g00787 | Blo06g00128 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00128 | Blo-Chr6:5176019 | Blo12g00911 | Blo-Chr12:27295851 | 3.62E-153 | dispersed | |
Blo13g00122 | Blo-Chr13:2984275 | Blo06g00128 | Blo-Chr6:5176019 | 1.31E-74 | dispersed | |
Blo15g00028 | Blo-Chr15:234270 | Blo06g00128 | Blo-Chr6:5176019 | 2.38E-71 | dispersed | |
Blo05g00787 | Blo-Chr5:28977306 | Blo06g00128 | Blo-Chr6:5176019 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12454 | PF00096 | zf-C2H2 | 0.005 | CL0361 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo06g00128 | K25869 | - | tcc:18610967 | 700.664 |