Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00128 ATGCCGACTGAGTTAGACAATTCCTCTACTGCTTCAGGCGAAGCTAGCGTTTCCTCCTCTGGAAATGAACCACCACCTCCAAAATTATCAGCTAAGAAAAAACGAAACTTACCAGGAATGCCAGATCCAGATGCAGAGGTAATTGCTCTGTCTCCGAAGACTCTCATGGCGACGAATCGATTCGTTTGTGAAATATGCAACAAGGGTTTTCAAAGGGATCAAAATTTGCAACTGCATCGAAGAGGTCATAATCTACCATGGAAGCTGAAGCAGCGATCGAGTAAGGAGGTAAAGAAGAGAGTCTACGTCTGCCCGGAGCCGTCGTGTGTCCACCACGATCCATCTAGAGCTCTGGGCGATCTCACTGGAATAAAGAAGCATTTCTGCAGAAAACACGGCGAGAAGAAGTGGAAATGCGACAAGTGTTCGAAGAAATACGCAGTTCAGTCGGACTGGAAAGCTCATTTCAAAATCTGCGGCACCAGAGAGTATAAGTGCGATTGCGGAACGTTGTTTTCCAGGAGGGATAGCTTCATCACGCACAGAGCTTTCTGCGATGCGTTGGCTGAGGAGAGCGCCAGAGCTCGAACTCATCCTCAACCCCCAACAATGGCAAATCCAAATTCAAAGTCCGACCCAAAAGTTCCACCATCCCCATCTTCTTCAGCTCCGCCGCGGCCTGCTCCAGCAGAGTCAACCGGTGCTGCCGTCTCCTCAGTTTTTCCGATTCAAAGTCAAGAGCTGCTGGAAAATCCCCCGCAAATTATCGAAGAAGTAGTGGCAGCTGGAGCAGGATTAAATGCGAGCTGCAGCAGCAGTTCGAGCCCGAGCAGCCATAGCTGCTCGAGCAGTAGTGTATTTGCGAGCATGTTTGCTTCCTCAAATGCAGCAGTGAGCTTACCACCCCCTCAACCTCCTGCATTTACCGACCTGATAAGAGCCATGGGAAGGTCCAATCGGCCAGCAGAGCTCACTCTATCTTCACCCTCCGAACCCATTTCTCTCTGCCTCTCAACTAGCCATCACAAGCCATCAACTTTCGGGGCTGCAGGCCAATATGCTCCTCCACCTCCACAGCCAGCTATGTCAGCCACAGCCCTTCTTCAGAAAGCTGCTCAAATGGGGGCTGCAGCCACTAATGCATCATTTCTTCGAGGGTTTGGAGTAGTGGCCTCAACTTCGTGCTCTACGCAACAAGAGAGCTTGCAATGGAGTCAGAGGCAAGTCGACCCGGATTCCGCCTCGATAGCTGCGGGGCTTGGCCTGGGACTTCCTTATGATGGAAGTTCTGGATTGAAGGAACTGATGATGGGAAATCATTCCATCTTTGGTCCTAAGCAAACTACACTTGATTTTCTAGGTCTTGGAATGGCAGCCGGTGGAAGTCCTAGTGGCAGCCTATCGGCACTAATCACGTCCATCGGTGGCGGTCTAGATGTCACAGCAGCCGCCTCCTTTGGAGGTGGTGAATTCTCCAGCAAAGACATTAGTAGAAACTCT 1500 50.67 MPTELDNSSTASGEASVSSSGNEPPPPKLSAKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVKKRVYVCPEPSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHFKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARARTHPQPPTMANPNSKSDPKVPPSPSSSAPPRPAPAESTGAAVSSVFPIQSQELLENPPQIIEEVVAAGAGLNASCSSSSSPSSHSCSSSSVFASMFASSNAAVSLPPPQPPAFTDLIRAMGRSNRPAELTLSSPSEPISLCLSTSHHKPSTFGAAGQYAPPPPQPAMSATALLQKAAQMGAAATNASFLRGFGVVASTSCSTQQESLQWSQRQVDPDSASIAAGLGLGLPYDGSSGLKELMMGNHSIFGPKQTTLDFLGLGMAAGGSPSGSLSALITSIGGGLDVTAAASFGGGEFSSKDISRNS 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5176019 5178139 - BLOR16711 Blo06g00128 61421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00128 500 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 500 - -
Blo06g00128 500 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Blo06g00128 500 MobiDBLite consensus disorder prediction 1 25 - -
Blo06g00128 500 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Blo06g00128 500 SMART c2h2final6 61 83 IPR013087 -
Blo06g00128 500 SMART c2h2final6 137 157 IPR013087 -
Blo06g00128 500 SMART c2h2final6 102 132 IPR013087 -
Blo06g00128 500 MobiDBLite consensus disorder prediction 1 45 - -
Blo06g00128 500 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Blo06g00128 500 Gene3D Classic Zinc Finger 41 107 - -
Blo06g00128 500 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 7 500 - -
Blo06g00128 500 MobiDBLite consensus disorder prediction 193 235 - -
Blo06g00128 500 Gene3D Classic Zinc Finger 115 195 - -
Blo06g00128 500 MobiDBLite consensus disorder prediction 212 226 - -
Blo06g00128 500 Pfam Zinc finger, C2H2 type 61 83 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00787 Blo06g00128 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00128 Blo-Chr6:5176019 Blo12g00911 Blo-Chr12:27295851 3.62E-153 dispersed
Blo13g00122 Blo-Chr13:2984275 Blo06g00128 Blo-Chr6:5176019 1.31E-74 dispersed
Blo15g00028 Blo-Chr15:234270 Blo06g00128 Blo-Chr6:5176019 2.38E-71 dispersed
Blo05g00787 Blo-Chr5:28977306 Blo06g00128 Blo-Chr6:5176019 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12454 PF00096 zf-C2H2 0.005 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00128 K25869 - tcc:18610967 700.664