Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00129 ATGGTTTCTTCTCCTGAGACTGCTCCGTCGCCCGACTCCTCTTCTTCACATGAATCTCCTCCTCCGCCGCCTAGTGAATCGGCCGAATCACCCCCTCCTCAATCTTCTACGCCTCCGCCACCTTCAGACAAATCCCCTCCTCCACCGCCCGAAAATGACTCCGATTATTCTTCTCCGCCTGCTCCACCTGCTCCACCGCCGCCTCCTCCTCCTCACACTTCTTCGTCATCTTCTTCCTCCATATCATTATCTCCTCCTCCTCCACCCCCACGGACATCTGCGTCATCTACATCCAGTCAATCATCGTCTTCAAATCAAAACCTACCTGTTATAATTGGTGTAGCAGCTGGAGTAGGTCTTTTGGTAATCGCAATGCTTATAATCTGCGTAATGTGTTCGAGGAAAAAAAGAAAGACAGATAAGATGCAATATTACAGAGACTCCGGCGAAGGTGGCAAGAATGGCGATTATTACAACAATTCAATGCAACAAAATTGGCACGGAAGCGACCATTTCGCGAGGCTTACGTCTCCGCCGGGTGCGAGCGGGTCATTGGGAGGCCCATGGCCCGCACCTCCCCCTCCTCCTCCGATGGGATTTAGCGGCGAAACGAGCTCAAATTACTCAGGCCCAAGGCAAATGCCTCTCCCGCCACCGTCTCCAAACCTCGCGCTAGGGTTCGACAAGAGCACGTTCACCTACGACGAGCTGGCGGCGGCGACAGGTGGATTTGCGCAGGTGAATCTGCTTGGGCAAGGTGGATTTGGGTTTGTTCATAAGGGTGTTCTTCCCAATGGGAAAGAAATCGCTGTGAAGAGTCTGAAATCTGGGAGTGGCCAAGGGGAGAGAGAATTTCAGGCGGAAGTTGAAATCATTAGCAGAGTTCATCATCGTCATCTTGTTTCTCTTGTTGGGTATTGCATTGCTGGTGGACAGCGGATGTTGGTTTACGAATTTGTGCCCAACAAGACATTGGAACATCACCTCCATGCAAAGAATCTTGCCACCATGGACTTGCCCACCAGGCTTCGTGTTGCCATTGGATCTGCCAAAGGTCTTGCTTATCTTCACGAAGACTGCCATCCTCGGATTATACATCGTGACATAAAATCTGCAAATATTCTCCTCGACTACAACTTTGAAGCCATGGTGGCTGATTTCGGATTGGCAAAGCTTTCTTCCGATAACTACACTCATGTCTCTACAAGAATCATGGGCACATTCGGGTATCTGGCTCCGGAATATGCATCGAGTGGGAAACTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTCATGCTGTTGGAGCTCATAACTGGAAAAAGACCAGTGGATCCTACTAATGCAATGGAGGATAGCTTAATTGACTGGGCTCGACCTCTTTTGAGCCGGGCACTCGAGGACGGGAACTTTGCTGAGCTGGTTGATATTCGCTTAGAAAATAACTTTAACCCTCAGGAGATGGCAAGAATGGTTGCATGTGCTGCAGCTAGCATTCGCCATTCGGCCCGAAAGCGCCCACGAATGAGCCAGATCGTAAGAGCATTAGAAGGAGACGTGTCACTGGAGGACTTGAAAGATGGGGGTGGGAGGCTAGGAGAGAGCTCGACGTTCACCTCAAACATAAGCTCATCGGACTATGACACAAGGGTGTACAACGCGGACATGGCAAAGTTTAGGCAGATGGCGCTGTCAAGCCAGGAGTTTGGGAGCAGTGAGCTTGGGACTTCCAGCAGTGACTCTGGCAACCAAAAACAGTACTATTGA 1767 50.25 MVSSPETAPSPDSSSSHESPPPPPSESAESPPPQSSTPPPPSDKSPPPPPENDSDYSSPPAPPAPPPPPPPHTSSSSSSSISLSPPPPPPRTSASSTSSQSSSSNQNLPVIIGVAAGVGLLVIAMLIICVMCSRKKRKTDKMQYYRDSGEGGKNGDYYNNSMQQNWHGSDHFARLTSPPGASGSLGGPWPAPPPPPPMGFSGETSSNYSGPRQMPLPPPSPNLALGFDKSTFTYDELAAATGGFAQVNLLGQGGFGFVHKGVLPNGKEIAVKSLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVPNKTLEHHLHAKNLATMDLPTRLRVAIGSAKGLAYLHEDCHPRIIHRDIKSANILLDYNFEAMVADFGLAKLSSDNYTHVSTRIMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTNAMEDSLIDWARPLLSRALEDGNFAELVDIRLENNFNPQEMARMVACAAASIRHSARKRPRMSQIVRALEGDVSLEDLKDGGGRLGESSTFTSNISSSDYDTRVYNADMAKFRQMALSSQEFGSSELGTSSSDSGNQKQYY 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5228479 5231060 - BLOR16712 Blo06g00129 61422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00129 588 Pfam Protein tyrosine and serine/threonine kinase 248 516 IPR001245 GO:0004672|GO:0006468
Blo06g00129 588 MobiDBLite consensus disorder prediction 1 105 - -
Blo06g00129 588 MobiDBLite consensus disorder prediction 169 219 - -
Blo06g00129 588 ProSiteProfiles Protein kinase domain profile. 244 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00129 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Blo06g00129 588 MobiDBLite consensus disorder prediction 185 200 - -
Blo06g00129 588 SMART serkin_6 244 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00129 588 ProSitePatterns Protein kinases ATP-binding region signature. 250 272 IPR017441 GO:0005524
Blo06g00129 588 MobiDBLite consensus disorder prediction 568 588 - -
Blo06g00129 588 MobiDBLite consensus disorder prediction 15 74 - -
Blo06g00129 588 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 575 - -
Blo06g00129 588 SUPERFAMILY Protein kinase-like (PK-like) 220 516 IPR011009 -
Blo06g00129 588 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 575 - -
Blo06g00129 588 Gene3D Transferase(Phosphotransferase) domain 1 320 526 - -
Blo06g00129 588 Gene3D Phosphorylase Kinase; domain 1 222 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00129 Blo-Chr6:5228479 Blo16g01036 Blo-Chr16:38800474 0 dispersed
Blo02g00798 Blo-Chr2:27198106 Blo06g00129 Blo-Chr6:5228479 0 transposed
Blo12g00466 Blo-Chr12:22206180 Blo06g00129 Blo-Chr6:5228479 3.89E-49 transposed
Blo05g00792 Blo-Chr5:29078656 Blo06g00129 Blo-Chr6:5228479 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84313 PF07714 PK_Tyr_Ser-Thr 3.00E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00129 - - rcu:8273399 721.465