Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00142 ATGGAGCGAAAGGCAACGGCCATCTTTTCAATGGCCGGCGCCGTCGAAAACCCTAGCCGATGGCGGTTCATCTGGGAAGCTCAGTCCTACGTTCCGACCCTCCGTTTACTACTTTTCGATACGGAAACTAATCCATCCATTCAATGCCAGGATCTCGTGGTTAATTTGGATCTCCCTCGATCGTTTCTTACTGTGAGCTGGTTTTCAGATCAGCGAGTTTCTCTTATGGTTCCGATTCCCAGAGTTTTGGTCGATGATGAGTCTCCTCTGAGTTGCAGAGCTTTTGATGATCATATTGAGGTGAAGTTTGTCTTGGTTCTTCCGGTTGATCATCCTATTGTTCTGAATTTCGAATCCTTACTGAACGTTTCTGAAGACACAGAAAGTGAAAGCTCTTATGCGTCAAAGTCTTTCTTTATGGGATCTGATAAAGACAATCTATCATCTAGTGGAGGCGTTGACTTTTATTGCAGGAGCTGCTCGTTCAGGTTGACTAAAAGTCCGATTAGAGATTTCTTGGAAATGCCATCTGTCAATTGGCGAGAGGTAGCTGATAACTGGTTTGATGCGTGCTGCTGTTCTTTTGGTGGCATCAGTGAGAAAATGGTAATCAGTTATGCAAATGCCTACTCGTACAAAAGCGGTGTCTGCTTACTATCCCCAACAACTATAACTCTTTTCAAGGATGATCTTGTTGAGTACATATCTTCCGTCTGTAATGGACTTGGAATGTTAAAGGTGGAGCCAGGTGTCACCTGCCAAAATGGGCTTCCTAAAGCTAAGCATGATTCAGAAGATACGTTTCTGTATGTGGAGGATCCAACCTCTAAACAAGGTTATGGTAAAGACATTGCAGCATACACTGAGTGTAGTGGAAACGAAAGTGGCAATGATGGTGTACATCATTTAGAATCTGGATTTTCTGATTGTAGTGATAATTCAGTGTCAGATCATATTAATCATGATTGCACACATGATTTATGTGAAAGTTCTGGAGACAACCAAAACAGTACTAAAATGATAAACATGCAGGCTGAACGCAAATCATTTCTTGATGGGTTTCTTGGGAATATATTCATGGTTCGATCTTCCAATCTCAGGGAAGATATTGAGTGGATTGAGTACTTATGCCCACAATGTTCATCTCTTCTTGGAGCTTACCCTTGCAGTAACAAGCATGAGCATGTAGATGGTGGAATTCGAATTTTTAAGTGTTATGTCTCAACTTCTTTGCCAGTTAATGGACCCGGTGACTTCTTCAGGAATTATACGTTGGAAAGCATGTTTGCAGTTCAGCTTTTGGAAAGTGCAACGGAAGAATCATCATTTCGTACTGTGGTCAAGGATCTCAAAACAAAATCTTCGATGCTGCACATTGTCGTTATAAATATAAATTCTTGGTCTTCTAGTGGTTATTGTTTGGGTATGGATGGCACAACAGCATTGTTTCAGAACATTGATTTACATCCTGTCATCAAAGTTTTATTCTCTGACTGCAGGGCAAGTGCAGAATCTCAGTTAAGCAGAACCTTGGAAGATTCAGTGGCAAAAGATTTAGTTGATGAAGTTTTCATGTTTAAGCATCAAATTGAAGAACTGATTGAAGCCTTAACATTGAGAAAGGCTATGAGTCCTCCTTCATGCTCTTCCCTTGATGGTTTATCTTCTTCTACCTGCAGTGCGACCTGTTCATCCATGTCATTCCTCTTTGTTCTTAAGACTTCTAAGAGCGTGGTTCGGCGCTTTGCTAGAGCTTGTACAATTCTCATCTACTGGATTAATTGTATTTTATCAAACATTATTTTCAAGTCCGCGCTGCAAAGTATCTTTCAAGTTATTAGACAGGTGCAGCCGAATGAGCCAAAGGAGGTTCAAATCAAGCCAGTTCATCATCTTTATCTTGCGGATGCCGAATTCCTCGATCCAGCAGGCATCTATGTCCTACCGGCAAGTGGCTCATGA 1962 41.44 MERKATAIFSMAGAVENPSRWRFIWEAQSYVPTLRLLLFDTETNPSIQCQDLVVNLDLPRSFLTVSWFSDQRVSLMVPIPRVLVDDESPLSCRAFDDHIEVKFVLVLPVDHPIVLNFESLLNVSEDTESESSYASKSFFMGSDKDNLSSSGGVDFYCRSCSFRLTKSPIRDFLEMPSVNWREVADNWFDACCCSFGGISEKMVISYANAYSYKSGVCLLSPTTITLFKDDLVEYISSVCNGLGMLKVEPGVTCQNGLPKAKHDSEDTFLYVEDPTSKQGYGKDIAAYTECSGNESGNDGVHHLESGFSDCSDNSVSDHINHDCTHDLCESSGDNQNSTKMINMQAERKSFLDGFLGNIFMVRSSNLREDIEWIEYLCPQCSSLLGAYPCSNKHEHVDGGIRIFKCYVSTSLPVNGPGDFFRNYTLESMFAVQLLESATEESSFRTVVKDLKTKSSMLHIVVININSWSSSGYCLGMDGTTALFQNIDLHPVIKVLFSDCRASAESQLSRTLEDSVAKDLVDEVFMFKHQIEELIEALTLRKAMSPPSCSSLDGLSSSTCSATCSSMSFLFVLKTSKSVVRRFARACTILIYWINCILSNIIFKSALQSIFQVIRQVQPNEPKEVQIKPVHHLYLADAEFLDPAGIYVLPASGS 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5611843 5615570 + BLOR16725 Blo06g00142 61435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00142 653 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 15 557 IPR019193 -
Blo06g00142 653 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 116 549 IPR019193 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00142 Blo16g00057 CCT
Blo06g00142 Blo16g00057 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00142 - - csv:101204887 567.0