Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00145 ATGTCGAAGTCACACTCGCAATCAGGGGTGTTACAATGGGAAAATGCCACAGCCGGTGCCGTTGCTGGATTCGCCACCGTCGCTGCGATGCATCCCCTTGACGTAGTACGCACCAGGTTTCAAGTAAATGATGGGCGACTATCCAATCTTCCGACTTACAAGAATACGGTTCATGCTATTTTCACCATTGCTCGCTTCGAGGGCCTGAGAGGGCTATATGCAGGATTCTATCCAGCAGTTCTTGGGTCATCTGTTTCATGGGGCTTATATTTCTTCTTCTATGGCAGAGCTAAACAAAGATATTCTAAAAATGGGGAGAAAAACCTAAGTCCTGCTCTTCATCTTGCTTCTGCTGCAGAAGCAGGAGCATTGGTTTGTTTGTGCACAAATCCTGTATGGCTGGTAAAAACAAGATTGCAGCTTCAGAATCCCCTCAATCAAATTCAACCATATTCTGGGCTTTATGATGCCTTTAGAACTATCATGAGGGAGGAAGGTTTTTCTGCACTCTACAAAGGGATCATTCCTGGTCTTTTTCTGGTTTCTCATGGAGCTATTCAGTTCGCTGCTTATGAGGAACTTCGAAAGTTTATTGTGAACTTGAAAACTAAAGATAATCGAGACAACAATGACGGTTCTGGGAGCTTATTAAATTCAGTTGACTATGCTTTTCTGGGAGCATCCTCCAAAATTGCAGCCATTCTTATGACATACCCCTTCCAGGTTATTCGTGCTCGCTTGCAGCAAAGACCTGGCAATAATGGAATTCCAATATACGTGGACAGCTTCCATGTCATGAAGGAAACTGGCCGGTTTGAGGGCATTCGAGGATTTTACAAGGGTATCACTCCAAACCTTTTGAAAAATGTTCCTGCTGCTTCAATTACATTCGTTGTCTATGAAAACGTCTTGAACTTGTTAAAGTCGGCTAGAAGAAAAGACTGA 945 43.49 MSKSHSQSGVLQWENATAGAVAGFATVAAMHPLDVVRTRFQVNDGRLSNLPTYKNTVHAIFTIARFEGLRGLYAGFYPAVLGSSVSWGLYFFFYGRAKQRYSKNGEKNLSPALHLASAAEAGALVCLCTNPVWLVKTRLQLQNPLNQIQPYSGLYDAFRTIMREEGFSALYKGIIPGLFLVSHGAIQFAAYEELRKFIVNLKTKDNRDNNDGSGSLLNSVDYAFLGASSKIAAILMTYPFQVIRARLQQRPGNNGIPIYVDSFHVMKETGRFEGIRGFYKGITPNLLKNVPAASITFVVYENVLNLLKSARRKD 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5741865 5745744 + BLOR16728 Blo06g00145 61438

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00145 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 310 IPR044712 GO:0006862|GO:0055085
Blo06g00145 314 Pfam Mitochondrial carrier protein 220 309 IPR018108 -
Blo06g00145 314 Pfam Mitochondrial carrier protein 108 199 IPR018108 -
Blo06g00145 314 Pfam Mitochondrial carrier protein 13 104 IPR018108 -
Blo06g00145 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Blo06g00145 314 SUPERFAMILY Mitochondrial carrier 13 302 IPR023395 -
Blo06g00145 314 Gene3D Mitochondrial carrier domain 52 314 IPR023395 -
Blo06g00145 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Blo06g00145 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Blo06g00145 314 PANTHER BNAA09G07970D PROTEIN 11 310 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00145 K15115 SLC25A32, MFT; solute carrier family 25 (mitochondrial folate transporter), member 32 - zju:107424547 481.87
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00145 Blo-Chr6:5741865 Blo10g00071 Blo-Chr10:679557 9.04E-14 dispersed
Blo11g00493 Blo-Chr11:4538647 Blo06g00145 Blo-Chr6:5741865 1.96E-21 dispersed
Blo14g00400 Blo-Chr14:4388114 Blo06g00145 Blo-Chr6:5741865 8.16E-23 dispersed
Blo18g00547 Blo-Chr18:7718366 Blo06g00145 Blo-Chr6:5741865 3.23E-11 dispersed
Blo06g00145 Blo-Chr6:5741865 Blo16g00730 Blo-Chr16:28415856 3.47E-44 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1048 . . . . . . . Bma15g00985 . . Cma03g00714 . . . . Cpe19g00828 Cpe10g00641 Bhi03g00909 . . . . . . Cla01g01945 . Cec04g1692 . Clacu01g2055 Cmu01g1932 . . Cone12ag0781 . . Lsi01g00639 . . Cme08g00891 . Blo06g00145 . . Bpe10g00131 . . . . Cmo03g00741 . . . . . . . . . . . . . . . . . . . . . . Csa06g03287 Chy02g00609 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010733 0 3 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00145 Blo_Chr06 FPKM 12.726714 13.477246 10.018907 10.922119 10.428309 9.320278 10.584894 15.477575 14.467903 15.022836