Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00177 ATGGGAGAAGGCGGAACAACTACGAGCAGCGGAAACAGAGGTATTCCTGCGGGCAATAGCTCCGCCCATTCCAACAAAAACAACAACGATAATGGCAACAACAGCAACAAACCTGAGTGGCTGCAACACTATGATCTGATCGGGAAGATCGGAGAGGGAACTTATGGTCTTGTATTCCTTGCAAGAATTAAATCTCCGTCCGCAAGTCGGGGAAAGTCCATTGCCATTAAAAAGTTCAAGCAATCTAAGGACGGTGACGGGGTCTCCCCAACCGCAATCCGCGAAATAATGTTGCTGCGGGAAATATCACATGAGAATGTTGTGAAGCTGGTGAACGTCCACATTAATCCCGCAGATATGTCCCTGTATCTGGCTTTTGATTACGCAGAACATGACCTCTATGAAATTATTAGACATCACAGGGACAAGGTCAACCATGCCATTAATCATTACACTGTAAAATCATTGTTGTGGCAGCTGCTTAATGGACTGAACTATCTTCATAGTAATTGGATCATTCACCGTGATCTAAAGCCCTCAAATATTTTGGTTATGGGCGAGGGAGAAGAACAGGGTATTGTTAAAATAGCTGATTTTGGCCTTGCAAGAATATACCAAGCCCCCCTTAAACCATTATCCGACAATGGGGTTGTTGTAACCATCTGGTATCGTGCTCCCGAGCTACTCCTTGGAGCGAAGCACTATACAAGTGCTGTTGGTATCCTTAGCCCTAAAATACGAATAGCTTCCTTTCATAATGAATTAGATATGTGGGCTGTTGGGTGCATTTTTGCAGAGCTTTTGACGCTAAAACCGCTCTTTCAAGGATCAGAAGTTAAAGGGACACCAAATCCTTTCCAACTTGATCAACTTGACAAGATTTTCAAGGTCTTAGGCCATCCCACAAACGAAAAGTGGCCAACACTTGCAAATCTTCCACATTGGCAACAAGATGTCCAACATATTCAAGGTCATAAGTATGATAATGCTGGACTTTATAATGTTGTTCATCTTTCTCCTAAAAGTCCCGCGTATGATCTCCTATCAAAGATGTTAGAATATGATCCCAGAAAACGTATAACCGCGGCACAGGCTCTGGATCATGAGTATGTTTCTCTCTGTCTGATTTCTTTTGCTTGGAAGGAGAAGAGGAGGGCTGGAGCCTCTGTTGAGAAGCAGAGTTGGCCGACAACTCCAGAGCTGACGTGGAAGGGAGCGATTGAGATGGCGACGAAGTTGAAGATTCGTCGAAGGAAAAAAGAAGCAACACATCAGCTCCCATTGACTATGACAATGTGCAGTGCCTTGGTGCCCAACCAACCCGGGGAGAAGATTGTAAATTATACTACTCGTCCTGTAGACACAACTGCTGATTTTGAGGGAACAACTAGCCTTCAACCTTCACAATCGGTATGCACATTTTCTGGGAATATGCAGGGTGCTCATGTAGTTGCAAGCAGGTCTGTCCCTCGGCCGATGTCCGTGGGTGCCATGCAGAGGATGCAATCTCAAGGCATGGCAGCTTATAATCTTGCATCTCAGCCTGGGATGGGTGGTGGTATGAATCCTAGTGGCATTTCAATGCAGCGTGGCATTTCTGCTCAGACCCACCAGCAACAGCAGCAGTTGAGGCGCAAAGACCCTGGAATGGGGATACCTGGATACCCACCACAGCAGAAATCAAGGCGTATGTTCGTCTTCAGAATGCAGAATCGCAGGTTCTCGGTGGTTCCAGGTTCCAGAATCGCAGAACGCAGAGAATCAAAGGCTCAGGTTCCGGCAATATCCCCAGTTTTGGTGCCTGCATTCGACGACGCGTGCGGCGGGTCGGCTTGGCTTAGCTTCTGGTCGTCATTGAGAGACAGGGAGGCCAGGTCGGTAACTTGTCGGGTGTGCCAATGTACAGAGTCTGATAAAAGAGGGGATGTTGTTTTAGGATTTTTGGGGATCACCCTTCCAGAAAGTAAAACCAATAAGAATGTGAAGCTTGACAGCCCTTTAAATGCAAAAAGTTCTCCCTCCAAGCAGAATGATGGAAAGGGATCCAGTGTAGTTGAGTTCATAGGTCCCGATGGTGAGGTTTTTATTTGTAACGCTGATATAGAAATGGGTTCATGTCTCAGTCAAGATGAGTTGGTCGAACTTGGTTGTTCTTGCAAAAATGACCTTGCACTTGTACACTATGCATGTGCTCTTAAGTGGTTTATCAGCCATGGATCTACTGTCTGTGAAATCTGTGGATGTGTTGCAAAAAATATTAGAACAGCTGACTTTAGAAAGGTTGTGGCTTCTTTGAAGGAATATGAAGCCTTAAGAGAAAGGACTGCTAGTGGGGAACGTAATCCTACTGGGCTTCATGATTCTGATACTAGTGTTGATCCCGATGCAGTTGCTGCTATTCGCCGACAAAGACTTAGTGAAATATTCTCATGGTTTAGTCCTCATAATCGTAATTACCATAACCATACGGCATTCTCACAGGTTCTTTCTGAACAGCCTCTGAGTTCAGCTACAGGAGAAGATGTTCCTGCTGAAAATGCAGCGACAAAGTGGGCTGTTGAATGTACTGGGATTCTTCTTGCGACAGGGTTACTTACTGTTACTCTTGCTTGGCTCATAGCTCCTCATGTGGGGAAGGTAAATCATATTAGTAGTACTTTGCTCTGA 2667 45.37 MGEGGTTTSSGNRGIPAGNSSAHSNKNNNDNGNNSNKPEWLQHYDLIGKIGEGTYGLVFLARIKSPSASRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVKLVNVHINPADMSLYLAFDYAEHDLYEIIRHHRDKVNHAINHYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVGILSPKIRIASFHNELDMWAVGCIFAELLTLKPLFQGSEVKGTPNPFQLDQLDKIFKVLGHPTNEKWPTLANLPHWQQDVQHIQGHKYDNAGLYNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALDHEYVSLCLISFAWKEKRRAGASVEKQSWPTTPELTWKGAIEMATKLKIRRRKKEATHQLPLTMTMCSALVPNQPGEKIVNYTTRPVDTTADFEGTTSLQPSQSVCTFSGNMQGAHVVASRSVPRPMSVGAMQRMQSQGMAAYNLASQPGMGGGMNPSGISMQRGISAQTHQQQQQLRRKDPGMGIPGYPPQQKSRRMFVFRMQNRRFSVVPGSRIAERRESKAQVPAISPVLVPAFDDACGGSAWLSFWSSLRDREARSVTCRVCQCTESDKRGDVVLGFLGITLPESKTNKNVKLDSPLNAKSSPSKQNDGKGSSVVEFIGPDGEVFICNADIEMGSCLSQDELVELGCSCKNDLALVHYACALKWFISHGSTVCEICGCVAKNIRTADFRKVVASLKEYEALRERTASGERNPTGLHDSDTSVDPDAVAAIRRQRLSEIFSWFSPHNRNYHNHTAFSQVLSEQPLSSATGEDVPAENAATKWAVECTGILLATGLLTVTLAWLIAPHVGKVNHISSTLL 888
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7354171 7385059 + BLOR16760 Blo06g00177 61470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00177 888 SMART ringv_2 706 747 IPR011016 GO:0008270
Blo06g00177 888 MobiDBLite consensus disorder prediction 662 682 - -
Blo06g00177 888 MobiDBLite consensus disorder prediction 1 37 - -
Blo06g00177 888 SUPERFAMILY Protein kinase-like (PK-like) 39 372 IPR011009 -
Blo06g00177 888 Gene3D Transferase(Phosphotransferase) domain 1 130 374 - -
Blo06g00177 888 Pfam Protein kinase domain 44 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00177 888 PANTHER CELL DIVISION PROTEIN KINASE 33 563 - -
Blo06g00177 888 Pfam RING-variant domain 710 746 IPR011016 GO:0008270
Blo06g00177 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 695 749 IPR013083 -
Blo06g00177 888 SMART serkin_6 44 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00177 888 PANTHER CYCLIN-DEPENDENT KINASE E-1 33 563 - -
Blo06g00177 888 Gene3D Phosphorylase Kinase; domain 1 22 129 - -
Blo06g00177 888 CDD STKc_CDK8_like 44 370 - -
Blo06g00177 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Blo06g00177 888 ProSiteProfiles Zinc finger RING-CH-type profile. 686 753 IPR011016 GO:0008270
Blo06g00177 888 MobiDBLite consensus disorder prediction 662 681 - -
Blo06g00177 888 MobiDBLite consensus disorder prediction 538 558 - -
Blo06g00177 888 SUPERFAMILY RING/U-box 709 749 - -
Blo06g00177 888 ProSiteProfiles Protein kinase domain profile. 44 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00177 888 ProSitePatterns Protein kinases ATP-binding region signature. 50 78 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00177 Blo-Chr6:7354171 Blo01g00370 Blo-Chr1:4310938 1.64E-66 dispersed
Blo06g00177 Blo-Chr6:7354171 Blo13g00685 Blo-Chr13:29587981 8.66E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84314 PF00069 Pkinase 1.60E-61 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00177 K02208 - vvi:100249168 695.271