Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00187 ATGAAGCTGATAGATGACTGCTATGTCGGAAAACCCGCCGGAGCCGGTGGACGGACGGTGGTGGTCGGACTGAAATTGGACCCGGAGAGCAGGAAGTTGCTCACTTGGGCTATGGTCAAAGTGGTTCAGCCTGGTGATTCCGTTATTGCTCTTCATGTCCTCGATTCCATTTCCGGTCTCTCTCTCTCTCTCTCTCCGCTCCCCTCCTTTTCCTTACTGAATATTTTCATCGTTCTGCTTGCAGAGAATTCGTCGTCGTTGATTTCTCTAGTGAAGACCTTCAATTCCTTTCTTACCATGTATGAAGGTTTCTGCAACTTAAAGCAGGTTGAATTGAAGCTTAAGGTGTGTAGGGGTTCGCCGGTGAATAAAATTCTGAACCGGGAACTGAAATTGTACTCCCGTGCTACTTTAATCGTCGGAACTTCCAAAAATCACAGTCCAATTCGTTCTTCAATGACCGTGGCAAAGTACTGTGCTAGAAAATTAGGCAAGAATTTCAATGTGATTGCTATTAATAATGGAAGAGTTGTCTTCCAAAGTGAAAGGATCAACCACGGTAGGAATCAAGACCTATTCGAAGATGATGATGCCTGCAAGAAATCTATTGATTGGATTCATAATTCATTACACCAAGATCTCGATGTAGTGACATCAGATTGTCCTCCTAACTGCTCACTAAAATCCGGCTCGGATTCTTGGAAGATATACGTGAATCAGATTTATACAAGCTATTCTCCAGTCTCTCCAGTTCTAGATCATCCAGGAAGCAAATTTTTGGCAGAGTTGTTTGAGAATTACCCAAAAAACCCAACGGCCATAATAACGGTTCGAACACAAGAAGCCCTTTTGAGATCGAAGTCATCTGTCGTTCGAGAAATGCAGCCAAAATCTGGTTGGTCATTTCTTCGTCGGCTCGTACCCAATCAGCACCAGATGGGCAAACCTGTAAAAACGATACCATTTTCCCAGCAGCTAAGCCTTCGATCTTCGGCTTTTGTGTATCCAGATCAAAAGCAGAATATTTGCAGCCATGATGAGGATCAAAATGATTTCTCTCTTCCTTCACCTTCTCACTCTCTTGAAAGCATTTCAAAAGAGTTGCCCGAATTGCTTCACAAATACGCCATGGCTTGCAGATTGTTTACATATCAGGAACTTCTGCTCGCGACATCTAACTTTGCACCTGAGAATATCGTCGGGAGAGGTGGAAGTAGTCAAGTTTACTGGGGGTGTCTCCCTGATGGCAAGGAATTGGCAGTGAAAATCTTGAAGCCATCTGAAGATGTCTTCAAGGAGTTTATGCAGGAAATAGAGATCATCACAACTTTGCATCACAAGAACATAATTTCCCTTCAAGGGTTCTGTTTTGAGGACAACCATTTACTCCTAGTCTACAATTTTCTCTCTAGGGGAAGCCTCGAAAAGAATCTCCACGGTAATTTGAAGGATTCAAATTTGTTTGGGTGGCAAGAGAGGTTCAAGGTTGCCGTAGGCGTGGCAGAGGCGCTTAATTATCTGCACAATGAATGTGCGGACCCCGTGATCCACAAAGACGTGAAATCTTCGAACATTCTTCTTTCTGACAATTTTGAGCCTCGGGTAATTTGTTATGCAAATTTATTGAATTCATTAGTTCATTCTAGCTATACTTTTGTAATAAACTATCGGATATGTTACTTGGCTCCAGAGTATTTCATGCATGGTAAAGTTACTGACAAAATCGATGTTTATGCATTCAGTGTTGTTCTCCTCGAACTACTTTCCGGTCGAAAGTCGATCAGCGACGACTGTCCGAAGGGTCAAGAAAGCCTTGTAATGTGGGCAAAACCAATTTTGAATAACGGGAAAGTTTCTCACTTGCTCGATCCAAGTTTAGGCAGTGATTACAATCACGATCAAATAGGAAGAATGATATTGGCAGCTACACTCTGCATAAAACGCTCACCGAGACATCGACCTCAGATCGGTCTCTGTGGTGGGAAGGCAACAGTGGAATCTGTGCAAGCCGCGACGGTGGACGAGCAACCCGCGGCGCCCTACGCGGAGCAACCCAAGGCGGTGCAACTCGAAGACACCGCCGACGATCGAGAAACTGTGGCACAATCGCAATGTCAAGTTGAACCCGAGCTTGAACACCAAGACAGAGAAGCTGGAGGCTCAATTGTCCGGTTTGAACCTGCAACAGCGGGGGATTTGGACTCATTGGCTGGAATGAGAATTAAACAACTGTTGGAAGATGCTGGATTAGCCGGATTGTGCCAGGTGAGGGGCAGTTATTGCGAGAGAGTGATAAGATTGTTCTATGCAAATTTGAGAATGTCAACCAAACCATTAGAGTTGAGGACGTACGTTTTGGGACGGGTGTTGAGATTGACTCCCAAAGACGTAAATATAATGCTTCGATGTGTACTGGACATGCCAAGCGATGATTATTATCACGTGTCTCGGGATCCACCATTTGTCAATCGAGGAGAAGGGTTAACGGTGCTTAAATTTTTGCATCGGGATCCCGAGATTGCTGAGTACCACAAGCCAAAGGGCAAGGAGCTGAATGTCATAGCCTGA 2568 44.55 MKLIDDCYVGKPAGAGGRTVVVGLKLDPESRKLLTWAMVKVVQPGDSVIALHVLDSISGLSLSLSPLPSFSLLNIFIVLLAENSSSLISLVKTFNSFLTMYEGFCNLKQVELKLKVCRGSPVNKILNRELKLYSRATLIVGTSKNHSPIRSSMTVAKYCARKLGKNFNVIAINNGRVVFQSERINHGRNQDLFEDDDACKKSIDWIHNSLHQDLDVVTSDCPPNCSLKSGSDSWKIYVNQIYTSYSPVSPVLDHPGSKFLAELFENYPKNPTAIITVRTQEALLRSKSSVVREMQPKSGWSFLRRLVPNQHQMGKPVKTIPFSQQLSLRSSAFVYPDQKQNICSHDEDQNDFSLPSPSHSLESISKELPELLHKYAMACRLFTYQELLLATSNFAPENIVGRGGSSQVYWGCLPDGKELAVKILKPSEDVFKEFMQEIEIITTLHHKNIISLQGFCFEDNHLLLVYNFLSRGSLEKNLHGNLKDSNLFGWQERFKVAVGVAEALNYLHNECADPVIHKDVKSSNILLSDNFEPRVICYANLLNSLVHSSYTFVINYRICYLAPEYFMHGKVTDKIDVYAFSVVLLELLSGRKSISDDCPKGQESLVMWAKPILNNGKVSHLLDPSLGSDYNHDQIGRMILAATLCIKRSPRHRPQIGLCGGKATVESVQAATVDEQPAAPYAEQPKAVQLEDTADDRETVAQSQCQVEPELEHQDREAGGSIVRFEPATAGDLDSLAGMRIKQLLEDAGLAGLCQVRGSYCERVIRLFYANLRMSTKPLELRTYVLGRVLRLTPKDVNIMLRCVLDMPSDDYYHVSRDPPFVNRGEGLTVLKFLHRDPEIAEYHKPKGKELNVIA 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7864244 7872502 + BLOR16770 Blo06g00187 61480

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00187 855 SUPERFAMILY Protein kinase-like (PK-like) 375 656 IPR011009 -
Blo06g00187 855 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 162 - -
Blo06g00187 855 SMART serkin_6 394 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00187 855 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Blo06g00187 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Blo06g00187 855 Gene3D Transferase(Phosphotransferase) domain 1 469 673 - -
Blo06g00187 855 ProSiteProfiles Protein kinase domain profile. 394 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00187 855 Gene3D - 8 165 - -
Blo06g00187 855 Gene3D Phosphorylase Kinase; domain 1 359 468 - -
Blo06g00187 855 CDD USP_Like 19 162 - -
Blo06g00187 855 PANTHER OS01G0253100 PROTEIN 14 657 IPR045271 GO:0004714|GO:0006468
Blo06g00187 855 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 14 657 - -
Blo06g00187 855 Pfam Protein kinase domain 397 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00187 - - - zju:107425669 635.95
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo06g00187 Blo16g00554 CCT
Blo06g00187 Blo16g00554 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00187 Blo-Chr6:7864244 Blo16g00554 Blo-Chr16:22812215 0 dispersed
Blo13g00103 Blo-Chr13:1837599 Blo06g00187 Blo-Chr6:7864244 3.56E-23 dispersed
Blo18g00366 Blo-Chr18:3851955 Blo06g00187 Blo-Chr6:7864244 5.87E-64 transposed
Blo05g00526 Blo-Chr5:9741036 Blo06g00187 Blo-Chr6:7864244 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1322 . Blo16g00554 . . . Bpe13g00054 . Bma15g00776 Cmo02g00650 Cmo20g01056 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo06g00187 . . Bpe10g00266 Bpe06g00305 . Bma06g00472 . . . . Cma20g01050 . . Cpe05g01044 Cpe16g00096 Bhi10g01716 . . . . . . Cla02g00030 . . . . . . Lsi10g00758 . . Cme11g00032
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021426 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84315 PF00069 Pkinase 4.60E-31 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo06g00187 Blo_Chr06 FPKM 0.393939 0.092538 0.0 0.391936 0.652781 0.602904 0.702039 0.0 0.0 0.0