Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00200 ATGGCCATGGAAGAACATCTCCTCCACAGCCAAGTGCCTTTCAATCATTCTCTTTTGCCCTATTTCTCTATTCCCGTTGATGAAATCCCGTCCAATAACCCACCGACCTCTGCTCATTTTAATGGTCAAGTGGCAAATTGTGTGGAGGGAGATGAACAAGAAGCAGATCAAGAAGATCTTGGCGCAATGAAGGAGATGATGTACAGAATTGCATCCATGCAGCCAGTGGACATTGACCCTGCCACCATCCGAAAGCCGAGACGGAAGAATGTTCGAATCAGTGACGACCCTCAGAGCGTTGCTGCTCGTTTACGAAGAGAGAAAATAAGTGAGAAAATGCGTATCCTCCAGCGTCTCGTCCCGGGAGGAACCAGATTGGACACGGCTTCTATGCTAGATGAAGCAATTCGATACATCAAGTTCTTAAAACGACAAATCCGCTTGTTACAATCCAATCATCAACCTCAAAGCATTAGCTTCAGCTTGGGTTCATCTTCTTCAACTCCAATAGATTGGTCTTCAAGAGCTAATGGAGATGCAGCCTCCACTGAACCCGGATTTGGAAGGAGCACAGGAGGAAGAAAAATCGGCTACCTGAAGCATGAGGTAATCAACGATTGA 621 46.22 MAMEEHLLHSQVPFNHSLLPYFSIPVDEIPSNNPPTSAHFNGQVANCVEGDEQEADQEDLGAMKEMMYRIASMQPVDIDPATIRKPRRKNVRISDDPQSVAARLRREKISEKMRILQRLVPGGTRLDTASMLDEAIRYIKFLKRQIRLLQSNHQPQSISFSLGSSSSTPIDWSSRANGDAASTEPGFGRSTGGRKIGYLKHEVIND 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8478312 8478932 - BLOR16783 Blo06g00200 61493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00200 206 CDD bHLH_AtIND_like 94 154 - -
Blo06g00200 206 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 49 167 - -
Blo06g00200 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 98 154 IPR036638 GO:0046983
Blo06g00200 206 MobiDBLite consensus disorder prediction 157 180 - -
Blo06g00200 206 Coils Coil 132 152 - -
Blo06g00200 206 Gene3D - 97 159 IPR036638 GO:0046983
Blo06g00200 206 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 49 167 IPR045843 GO:0003700|GO:0006355
Blo06g00200 206 SMART finulus 99 148 IPR011598 GO:0046983
Blo06g00200 206 MobiDBLite consensus disorder prediction 157 194 - -
Blo06g00200 206 Pfam Helix-loop-helix DNA-binding domain 103 142 IPR011598 GO:0046983
Blo06g00200 206 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00200 Blo-Chr6:8478312 Blo07g00764 Blo-Chr7:24754605 2.74E-30 dispersed
Blo14g00841 Blo-Chr14:30713953 Blo06g00200 Blo-Chr6:8478312 4.41E-07 dispersed
Blo15g00520 Blo-Chr15:9497515 Blo06g00200 Blo-Chr6:8478312 2.68E-11 dispersed
Blo06g00200 Blo-Chr6:8478312 Blo12g00959 Blo-Chr12:27725668 6.52E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12457 PF00010 HLH 5.70E-07 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00200 - - zju:107425697 198.364