Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00212 ATGGCCGATGGTGAGGATATTCAGCCACTTGTTTGCGATAATGGAACTGGCATGGTGAAGGCTGGATTTGCTGGTGATGATGCTCCCAGAGCAGTTTTTCCCAGTATTGTGGGGAGACCTAGACACACTGGTGTTATGGTTGGAATGGGGCAGAAAGATGCTTATGTGGGTGATGAAGCTCAGTCCAAAAGAGGTATTCTTACCTTGAAATATCCCATTGAGCATGGAATAGTCAGCAATTGGGATGACATGGAAAAGATTTGGCATCACACGTTCTACAATGAGCTTCGTGTTGCCCCTGAAGAGCACCCAGTACTGCTCACGGAGGCTCCCCTTAACCCCAAGGCTAACAGAGAAAAGATGACACAGATCATGTTTGAAACCTTCAATGTCCCTGCCATGTATGTTGCCATCCAGGCTGTTCTATCTCTGTATGCAAGTGGTCGTACAACTGGTATTGTACTGGACTCTGGTGATGGTGTGAGTCACACTGTTCCCATCTATGAGGGTTATGCTCTTCCTCATGCTATTCTTCGGCTGGACCTGGCCGGTCGTGATCTTACAGATGCTTTGATGAAGATTCTAACAGAAAGAGGTTACATGTTTACAACTACTGCTGAACGGGAAATTGTCCGTGACATGAAGGAAAAGCTTGCCTATGTTGCTCTTGACTATGAGCAGGAGCTTGAAACTGCAAAGAGTAGTTCCTCTGTTGAGAAGAACTATGAATTGCCTGATGGTCAAGTAATTACGATTGGAGCAGAGAGATTCCGTTGCCCTGAAGTCCTCTTCCAGCCATCTCTCATTGGAATGGAAGCTGCAGGAATTCATGAGACTACCTACAATTCGATTATGAAGTGTGACGTCGATATCAGAAAAGATCTGTATGGAAACATTGTCCTCAGTGGTGGTTCAACTATGTTCCCTGGAATTGCGGACAGAATGAGCAAGGAAATCACAGCTCTTGCTCCTAGCAGCATGAAGATTAAGGTTGTTGCACCACCAGAAAGGAAATACAGTGTCTGGATTGGAGGATCGATCCTCGCATCGCTCAGCACATTCCAGCAGATGTGGATCTCAAAGGGTGAGTATGATGAGTCGGGCCCATCTATTGTGCACAGGAAGTGCTTCTGA 1134 46.21 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9470857 9472266 - BLOR16795 Blo06g00212 61505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00212 377 PANTHER ACTIN 1 376 IPR004000 -
Blo06g00212 377 Gene3D - 140 340 - -
Blo06g00212 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Blo06g00212 377 PANTHER ACTIN 1 376 - -
Blo06g00212 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Blo06g00212 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Blo06g00212 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Blo06g00212 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Blo06g00212 377 PRINTS Actin signature 238 254 IPR004000 -
Blo06g00212 377 PRINTS Actin signature 51 62 IPR004000 -
Blo06g00212 377 PRINTS Actin signature 63 85 IPR004000 -
Blo06g00212 377 PRINTS Actin signature 142 161 IPR004000 -
Blo06g00212 377 PRINTS Actin signature 28 37 IPR004000 -
Blo06g00212 377 PRINTS Actin signature 117 130 IPR004000 -
Blo06g00212 377 Pfam Actin 5 377 IPR004000 -
Blo06g00212 377 SMART actin_3 7 377 IPR004000 -
Blo06g00212 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Blo06g00212 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Blo06g00212 377 Gene3D - 10 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00958 Blo-Chr4:11695906 Blo06g00212 Blo-Chr6:9470857 0 dispersed
Blo06g00212 Blo-Chr6:9470857 Blo16g00535 Blo-Chr16:22174140 0 dispersed
Blo05g00554 Blo-Chr5:11889754 Blo06g00212 Blo-Chr6:9470857 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00212 K10355 - zju:107425564 756.518