Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00218 ATGAAACCTTCTCCCACCGATCCTCAGTTCTCTCTCCTCGTCCTCCTATTCTTCCTCAACTCTCTCTCACTAGATGCTTTATCTTCACCTTCAAGAGAAGCCCAGCAGCTGATCAACTTCAAAACCTCACTTCCCAACCCGTCTCTGCTTCAGAACTGGCTCTCCAATGGCGACCCGTGTTTTTTTTCTCGCGTTTTTTGCAAAGAATCCAGAGTTTCCGCAATAGACCTAAGCTTTATCCCCTTACGCTCGAATCTCAGCTCCGTCTTCTCTACCCTTTTCACACTCGACCACTTAGAATCCATCTCGCTGAAATCTACTAATCTTACAGGCACCATTTCTGTACCCTCTGGATCCAAGTGCAGCTCTATGTTGACGGCCATAGATCTATCTCAGAACCGCTTGTTTGGCCCCATTTCAGACGCTTCTAACCTGGGTTATTGCTCAAATTTGAAGACTCTAAATCTGTCGTCCAATTTGTTTGATTTTACAGTGAAGGATGCTACCGGATTGAAGCTCGATTTGAAGGTTCTCGATTTTTCTTTCAATAAAATCTCGGGTTCAAACGTGATGCCTTGGATTTTATCCGCTGGTTGCGGCGAAATGCAACACTTGGCGATAAAGGGTAACAAAATCGGCGGCGAAATTAATTTCGAATCGTGCAAGAATTTGGAGTATTTGGATATCTCCTTCAATAATTTCTCCGAGATCATTACTTCGTTCGGAGATTGCTCCTTTTTGGAACACCTTGACATCTCCGGCAACAAGTTTTCCGGCGACGTTGGACGAGTTCTCTCTGTTTGTGACCACCTCAGCTTCCTTAATCTCTCCACCAACCTGCTTTCCGGACAAATCCCGGCGTTTTCTTCTCGGAGCTTAAGGTTTATCTCGCTTTCCGGCAACCATTTCCAAGGCCAGATTCCGCCCCATCTTTCTGATTCGTGCTCTAGTTTGATAGAGCTGGACCTCTCGATGAATAACTTATCCGGTGGAGTTCCTTCGGCTCTGAGTTCTTGTTCTTCTCTTCAGTTTTTTGATATTTCGAGCAATAATTTGTCTGGTGAACTACCCATTTCTGTTTTCACTTCAATGGTTAGCTTGAAGGTGCTTTCTCTGTCCGACAACAAATTTTCCGGCGAGCTGCCAGGTTCTCTTTCTAATTTCACCAGCCTGGAGACTTTGGATCTCAGTTCGAATAATTTTTCTGGGTTGATTCCATCGATGCTTTGCCAAAACTCCGGCAACAACTTAAAGGAGTTATTTCTACAAAATAATCTGTTAATGGGTTCCATTCCAGCGACTCTGAGCAACTGTTCTCAGCTCGTTTCCCTCGATTTGAGTTTCAATTTTCTCACAGGAGCTATCCCGTCGAGCTTAGGCTCTCTCTATAAGCTCCGGAATCTGATTATTTGGTTGAATCAGCTTGAAGGAGAAATCCCAGAAGAGCTCATGTTCATTCAGGCCCTTGAGAATGTGATTCTCGATTTCAATTTTCTGACTGGAACTATCCCCACCGGCCTAAGCAACTGCACCAGCCTCAACTGGATTTCCCTATCTAATAACCAATTGAGCGGCCAGATTCCAGCATGGATAGGCGGCCTTCCAAGCTTAGCCATCCTCAAACTAAGTAACAATTCGTTCTCCGGGAGGATCCCACCGGAGTTAGGGAATTGTCGGAGCTTGATATGGTTGGACCTCAACACTAACTATTTAAACGGGATGATTCCGCCGGAGCTTTTCAAGCAATCTGGCAACATTGCCGTCAACTTTATTACAGGAAAATCCTATGTAGGTATCACCCAACCCACATTTAACCACAATGGCTCCATGATTTTTCTTGATATTTCTCATAACATGTTATCTGGTAGTATTCCCAAAGAGATTGGCTCTACAAATTATCTTTACATTCTGAATTTGGGCCATAACAATCTCTCTGGGACGATCCCTCAAGAACTCGGAAACCTCAGGAGTCTTAACATTCTTGATCTTTCTAGTAACAAATTGGAAGGGTCAATTCCGCCATCTTTGAGTGACCTTTCCTTGCTCACCGAGATTGATTTGTCTAATAATCTCTTGAACGGAACTATACCAGAATCCGGCCAGTTTGAAACCTTTCCGCCGACTGGGTTTTTGAACAATTCTGGCCTCTGTGGGTACCCTCTAGCTAAATGCGGGGCTGATTCCAACTCGAGCTTGGATCCTCAACACGAGAAGTCTCAAAGGAGACAAGCTTCACTTGCTGGAAGTGTGGCAATGGGGTTATTATTTTCTCTTTTCTGCATATTTGGATTGATCATAGTTGCCATAGAAACTCGGAAGAGAAGGAAGAAGAAGGATTCGACCCTCGATATTGGGGACAGCCATTCACATTCAGGTACTGCAAATCCGAGTTGGAAGTTCACCAGCGCCAGAGAAGCATCAAGTATAAATCTAGCTACTTTCGAGAAACCCTTACAGAAGCTCACATTTGCAGACCTTCTGGAGGCCACTAATGGCTTCCACAGCGACAGTCTGGTAGGGTCGGGTGGATTTGGGGATGTCTACAAAGCTCAGTTGAAGGATGGAAGTGTTGTTGCCATAAAAAAACTGATCCATGTAAGTGGGCAAGGGGATAGAGAATTCACTGCTGAAATGGAAACGATTGGAAAAATCAAGCACAGAAATCTTGTACCCCTCCTTGGGTATTGCAAGGTCGGCGAAGAACGCCTTCTGGTTTATGAGTTCATGAAATTTGGAAGCTTAGAAGACGTTTTACATGACCAGAAGAAGTTGGGAATGAAGCTGAATTGGGCTGTGAGGAGGACGATAGCCATTGGAGCAGCCAGAGGACTGGCTTTTCTTCACCACAGTTGCACTCCCCACATAATTCATCGCGATATGAAGTCAAGCAACGTGCTGCTCGACGAAAACTTGGAAGCTCGGGTCTCAGACTTCGGCATGGCGAGGCTGATGAGTGTGACGGACACCCATTTGAGCGTCAGTACCCTCGCCGGAACTCCTGGCTACGTCCCGCCAGAGTACTACCAGAGCTTCCAGTGCTCCACGAGGGGCGATGTCTATAGCTACGGGGTCGTCCTATTAGAGCTTCTCACCGGAAAACGGCCGACTGACTCGATAGATTTTGGCGATAACAATCTCGTTGGGTGGGTGAAAATGCACGCAAAATTGAAAATAAGTAACGTGTTTGATCAGGAGCTCATGAAAGAGGATCCAAGCCTCGAAATCGAGCTCTTGCAGCATTTGAAGGTGGCATGTGCTTGCCTGGACGACCGGCCGTGGAGGCGGCCAACAATGATTCAGGTGATGGCTATGTTTAAGGAAATTCAGGCAGGGCCGGGGATGGATAGTCAGTCGACTATTTCCTCCGGGGACAGAGGATTCAGTGGGGTTGATGGGGTGGAAATGAGTATAAAAGAGGCCCCAGAACTAAGCAAGCAGTAG 3441 46.0 MKPSPTDPQFSLLVLLFFLNSLSLDALSSPSREAQQLINFKTSLPNPSLLQNWLSNGDPCFFSRVFCKESRVSAIDLSFIPLRSNLSSVFSTLFTLDHLESISLKSTNLTGTISVPSGSKCSSMLTAIDLSQNRLFGPISDASNLGYCSNLKTLNLSSNLFDFTVKDATGLKLDLKVLDFSFNKISGSNVMPWILSAGCGEMQHLAIKGNKIGGEINFESCKNLEYLDISFNNFSEIITSFGDCSFLEHLDISGNKFSGDVGRVLSVCDHLSFLNLSTNLLSGQIPAFSSRSLRFISLSGNHFQGQIPPHLSDSCSSLIELDLSMNNLSGGVPSALSSCSSLQFFDISSNNLSGELPISVFTSMVSLKVLSLSDNKFSGELPGSLSNFTSLETLDLSSNNFSGLIPSMLCQNSGNNLKELFLQNNLLMGSIPATLSNCSQLVSLDLSFNFLTGAIPSSLGSLYKLRNLIIWLNQLEGEIPEELMFIQALENVILDFNFLTGTIPTGLSNCTSLNWISLSNNQLSGQIPAWIGGLPSLAILKLSNNSFSGRIPPELGNCRSLIWLDLNTNYLNGMIPPELFKQSGNIAVNFITGKSYVGITQPTFNHNGSMIFLDISHNMLSGSIPKEIGSTNYLYILNLGHNNLSGTIPQELGNLRSLNILDLSSNKLEGSIPPSLSDLSLLTEIDLSNNLLNGTIPESGQFETFPPTGFLNNSGLCGYPLAKCGADSNSSLDPQHEKSQRRQASLAGSVAMGLLFSLFCIFGLIIVAIETRKRRKKKDSTLDIGDSHSHSGTANPSWKFTSAREASSINLATFEKPLQKLTFADLLEATNGFHSDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEFMKFGSLEDVLHDQKKLGMKLNWAVRRTIAIGAARGLAFLHHSCTPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSVTDTHLSVSTLAGTPGYVPPEYYQSFQCSTRGDVYSYGVVLLELLTGKRPTDSIDFGDNNLVGWVKMHAKLKISNVFDQELMKEDPSLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGPGMDSQSTISSGDRGFSGVDGVEMSIKEAPELSKQ 1146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10212904 10216473 + BLOR16801 Blo06g00218 61511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00218 1146 ProSitePatterns Protein kinases ATP-binding region signature. 839 862 IPR017441 GO:0005524
Blo06g00218 1146 SUPERFAMILY Protein kinase-like (PK-like) 811 1105 IPR011009 -
Blo06g00218 1146 PRINTS Leucine-rich repeat signature 655 668 - -
Blo06g00218 1146 PRINTS Leucine-rich repeat signature 391 404 - -
Blo06g00218 1146 Gene3D Transferase(Phosphotransferase) domain 1 909 1110 - -
Blo06g00218 1146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Blo06g00218 1146 ProSiteProfiles Leucine-rich repeat profile. 390 411 IPR001611 GO:0005515
Blo06g00218 1146 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 591 - -
Blo06g00218 1146 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 598 1120 - -
Blo06g00218 1146 SMART serkin_6 833 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00218 1146 Pfam Leucine Rich Repeat 441 462 IPR001611 GO:0005515
Blo06g00218 1146 PANTHER SYSTEMIN RECEPTOR SR160 18 591 - -
Blo06g00218 1146 SUPERFAMILY RNI-like 265 578 - -
Blo06g00218 1146 PANTHER SYSTEMIN RECEPTOR SR160 598 1120 - -
Blo06g00218 1146 Gene3D Ribonuclease Inhibitor 23 728 IPR032675 -
Blo06g00218 1146 SUPERFAMILY L domain-like 518 701 - -
Blo06g00218 1146 ProSiteProfiles Protein kinase domain profile. 833 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00218 1146 SMART LRR_typ_2 388 411 IPR003591 -
Blo06g00218 1146 SMART LRR_typ_2 655 679 IPR003591 -
Blo06g00218 1146 SMART LRR_typ_2 534 558 IPR003591 -
Blo06g00218 1146 SMART LRR_typ_2 364 387 IPR003591 -
Blo06g00218 1146 SUPERFAMILY L domain-like 51 305 - -
Blo06g00218 1146 MobiDBLite consensus disorder prediction 778 798 - -
Blo06g00218 1146 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Blo06g00218 1146 CDD STKc_IRAK 839 1108 - -
Blo06g00218 1146 Gene3D Phosphorylase Kinase; domain 1 794 908 - -
Blo06g00218 1146 Pfam Leucine rich repeat 291 352 IPR001611 GO:0005515
Blo06g00218 1146 Pfam Leucine rich repeat 488 546 IPR001611 GO:0005515
Blo06g00218 1146 Pfam Leucine rich repeat 356 401 IPR001611 GO:0005515
Blo06g00218 1146 Pfam Leucine rich repeat 634 692 IPR001611 GO:0005515
Blo06g00218 1146 Pfam Protein kinase domain 833 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00511 Blo-Chr4:4336074 Blo06g00218 Blo-Chr6:10212904 5.29E-23 dispersed
Blo05g00546 Blo-Chr5:11346791 Blo06g00218 Blo-Chr6:10212904 0 dispersed
Blo06g00218 Blo-Chr6:10212904 Blo07g00419 Blo-Chr7:7885630 3.48E-68 dispersed
Blo07g01205 Blo-Chr7:31967199 Blo06g00218 Blo-Chr6:10212904 1.06E-12 dispersed
Blo11g00747 Blo-Chr11:10086401 Blo06g00218 Blo-Chr6:10212904 2.58E-31 dispersed
Blo15g00695 Blo-Chr15:21890740 Blo06g00218 Blo-Chr6:10212904 1.19E-18 dispersed
Blo06g00218 Blo-Chr6:10212904 Blo16g00704 Blo-Chr16:27022139 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84318 PF00069 Pkinase 6.20E-45 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00218 K13415 - csv:101209118 1639.4