Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00269 ATGAGTTTCAATGGCCTCCCCCCTGCTCTTGCCATCGACGAAGCCTCGCCGGAGTGGCTTAGCAAAGCAGACAATGCGTGGCAACTTACAGCAACCACCATGGTCGGCCTCCAAAGCCTACCGGGCCTTGTTATTCTGTACGGAAGTATGGTGAAGAAAAAATGGGCCGTCAACTCCTCTTTCATGGCGCTTTACTCCTTCGCTGCAGTTCTCGTCTGCTGGGTTCTTTGGGCGCACCACATGGCCTTTGGGGACAAAATGATTCCCATTGTTGGTAAGCCCAATGTCGCCCTCTCAGAAAACCTTCTTCTCGGACAAACCAAGCTGAAGTTGGCGAAGTACTACGTGCCAATGGCGGACTATGTGTTTTTCCAATTTGCTTTCGCCGCCATTACCGTCATATTGCTAGCCGGCTCGTTGTTGGGGAGGATGAACTTTCTTGCGTGGATGATGTTTGTCCCTCTCTGGCTCACCTTTTGTTACACAGTTGGCGCATTCAGCATCTGGGGAAATGGTTTTGGAGAGAAATACATCATTGATTATGCGGGCGGATATGTCATTCATCTCTCTTCAGGAGTTGCAGGTTTCACAGCTGCTTACTGGGTTGGTCCGAGAAGCGTAGACGACAGGCAGCACTTCCCACCAAACAACATAGTTCACGTGCTTGGAGGCGCCGGATTCTTATGGCTGGGTTGGACTGGTTTCAATGGAGGATCCCCATTTGCTGCGAGTACCGTCACATCTTTAGCCGTTTGTAACACACATCTCTGCACTGCTACCAGTATCTTGATATGGATGTCTTTGGACATGATAGTCTACAAGAAAATCTCTGTGGTCGGAGCGGTTCAAGGGATGATCACCGGCCTCGTTTGCATCACCCCCGGCGCAGGCCTGGTGGATCCTGTTGCGGCGTCGGTAATGGGGTTTTTATCAGGTTCGGTGCCGTGGTACACGATGATGATTTTACACAGAAGATTGGACTTCTTCCAGAGCGTAGACGACACTTTAGGGGTTTTCCACACTCATGCAGTGGCCGGAGCTTTGGGAGGACTCCTCACCGGCTGCTTCGCCAGACCTAATCTTCTCCATCTCATGTACGGCAATAACGAATACGGTCCAGGAATCTTGTACGCCATGTTTGATGGACGGTTCAGAAAAGGTTTGAAACAGTTTGGCTTCCAGGTAAGCGGATTATTGTTCATCGCGATGTGGAACGCCATTGGAACGAGCTTGATCTGTATTTTGATAAGACGTGTTGTGAGTCTGAGGATGGAGGAAGAACAGCTCAGGATAGGGGACGACGCCGTTCATGGAGAAGAAGCTTACGCTGTGTGGGGAGACGGGGACAGACTATCGTCCACCATTCGTCTTCGCGTTTCACGAGTGCCTTCTGTAAGCCGCGGAGACGATTGA 1413 50.88 MSFNGLPPALAIDEASPEWLSKADNAWQLTATTMVGLQSLPGLVILYGSMVKKKWAVNSSFMALYSFAAVLVCWVLWAHHMAFGDKMIPIVGKPNVALSENLLLGQTKLKLAKYYVPMADYVFFQFAFAAITVILLAGSLLGRMNFLAWMMFVPLWLTFCYTVGAFSIWGNGFGEKYIIDYAGGYVIHLSSGVAGFTAAYWVGPRSVDDRQHFPPNNIVHVLGGAGFLWLGWTGFNGGSPFAASTVTSLAVCNTHLCTATSILIWMSLDMIVYKKISVVGAVQGMITGLVCITPGAGLVDPVAASVMGFLSGSVPWYTMMILHRRLDFFQSVDDTLGVFHTHAVAGALGGLLTGCFARPNLLHLMYGNNEYGPGILYAMFDGRFRKGLKQFGFQVSGLLFIAMWNAIGTSLICILIRRVVSLRMEEEQLRIGDDAVHGEEAYAVWGDGDRLSSTIRLRVSRVPSVSRGDD 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14480165 14481806 + BLOR16852 Blo06g00269 61562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00269 470 TIGRFAM amt: ammonium transporter 24 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo06g00269 470 Gene3D Ammonium transporter AmtB like domains 9 446 IPR029020 -
Blo06g00269 470 Pfam Ammonium Transporter Family 26 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Blo06g00269 470 PANTHER AMMONIUM TRANSPORTER MEP2 5 466 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo06g00269 470 PRINTS Rhesus blood group protein signature 125 141 IPR002229 GO:0005887
Blo06g00269 470 PRINTS Rhesus blood group protein signature 219 237 IPR002229 GO:0005887
Blo06g00269 470 PRINTS Rhesus blood group protein signature 250 272 IPR002229 GO:0005887
Blo06g00269 470 SUPERFAMILY Ammonium transporter 19 423 - -
Blo06g00269 470 ProSitePatterns Ammonium transporters signature. 180 205 IPR018047 GO:0008519|GO:0016020|GO:0072488
Blo06g00269 470 PANTHER AMMONIUM TRANSPORTER 5 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00269 Blo-Chr6:14480165 Blo07g00139 Blo-Chr7:1877222 0 dispersed
Blo06g00269 Blo-Chr6:14480165 Blo02g00477 Blo-Chr2:6850474 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00269 K03320 - zju:107407267 701.049