Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo06g00279 | ATGATGGAGACTCCATCTGGTGATTTACCATCTGAATCAAGTGTCAAAACATCTGCTGATAAAAATTTGACTTCTGATGTTTCATCACAAGATAATGCTGGCAGTCACTTAGCATCAAAGTTTTCTGCTTCTGGCGAATCATCTTGGGCTAGAAGTTTGAAATTTCCACAGCAATTGGGAGGAGAAGCAGAGCATCCAAAAGAAGGAAATGCCATGATGTCGACATTTGCACGTTTCACTGGTGGTTTTGGTTTGGGTGTTCCTTCAGTCACTTCAGAGCCAAATAAGGACAGTGCTGCAACGACTGCACAATATGGTGTCGTAGCGTCACTTACAAAAGGAATAGTTGATTCATCTCTTAGTGCTGTAAAAGCAATGCAGGTCAAGGCTCGACATATTGTGTCTCAGAAAAAAAGAAGATATCAGTCTTTGAAACTGATTGACTGTTTGCAGTTGTATAAAGAATACAACTCAGTAGTTCATTATTTTTGTTGCAAAAAACATCTGTTTTACTTCATTTCAGAAGGAGGTTTTGATTTAGATATGACTTATATCACCGAGAATGTCATTGCTATGGGATTCCCTGCTGGTGACATAAGCTCTGGGTTTTTTGGATATCTTGAGGGTTTTTATCGAAATCACATGGAAGAAGTGATCAAATTCTTTGAATCCCACCACCAGGGAAAGTACAAAGTATATAATCTTTGTTCAGAGCGGTTGTATGATGCTTCCTTGTTTGAAGGGAAGGTTGCGAATTTCCCATTTGATGATTATAACTGCCCACCTTTACATCTTATAAAATCATTTTGTCAAAGTGCGTATTCATGGCTAAAGGAGGACATTGAGAATGTTGTGGTTGTTCATTGTAAAGCTGGTATGGGAAGGACAGGCTTAATGATTTGTAGCCTTCTCTTGTTCATCAAGATGTTCCCAAAGGCTGAGGAAGCAATTAATTATTACAACCAGAAGAGATGTATTGATGGAAAGGCTTTGGTTCTCCCTAGTCAGATTAGGTATGTCAAATACTTTGAAAGCACTTTAACGTCTTCAAATGGAGAAAATCATCAAGGACGTAGGTGCATGCTTCGAGGTTTTCGGATTTACAAATGCCCTAATTGGCTTAGACCTTCCATTACAATTTCTGATCACCAAGCAGGAATTTTATTCTCGACTAGGAAACATCCAAAAACTAAGGATCTAATGCCAGAAGATTTCTGGCTTCGTGCAACAAAGAAAGGATTTGTGGTGTTTGCGCTACCTGGGGAACCTGGTCTAACTGAATTGATGGGAATCGCTGGATTAATTGGTGTTAGAGTAGTGGTTGTCGATGAAAAGAAGAGGGCTAGTTATGTAATCAAAAAACCTAAAAGAACCAGAAATGGAGGTGCAGGAAGAGATGATCTTGATCAAAAGGGAAGCATAGAAGAAGTCAAGGCCCTGGAAAGAAAAGATTGA | 1455 | 39.18 | MMETPSGDLPSESSVKTSADKNLTSDVSSQDNAGSHLASKFSASGESSWARSLKFPQQLGGEAEHPKEGNAMMSTFARFTGGFGLGVPSVTSEPNKDSAATTAQYGVVASLTKGIVDSSLSAVKAMQVKARHIVSQKKRRYQSLKLIDCLQLYKEYNSVVHYFCCKKHLFYFISEGGFDLDMTYITENVIAMGFPAGDISSGFFGYLEGFYRNHMEEVIKFFESHHQGKYKVYNLCSERLYDASLFEGKVANFPFDDYNCPPLHLIKSFCQSAYSWLKEDIENVVVVHCKAGMGRTGLMICSLLLFIKMFPKAEEAINYYNQKRCIDGKALVLPSQIRYVKYFESTLTSSNGENHQGRRCMLRGFRIYKCPNWLRPSITISDHQAGILFSTRKHPKTKDLMPEDFWLRATKKGFVVFALPGEPGLTELMGIAGLIGVRVVVVDEKKRASYVIKKPKRTRNGGAGRDDLDQKGSIEEVKALERKD | 484 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 15505319 | 15509441 | + | BLOR16862 | Blo06g00279 | 61572 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo06g00279 | 484 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 171 | 350 | IPR029023 | - | |
Blo06g00279 | 484 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B | 11 | 143 | - | - | |
Blo06g00279 | 484 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 285 | 324 | IPR000387 | GO:0016311|GO:0016791 | |
Blo06g00279 | 484 | MobiDBLite | consensus disorder prediction | 7 | 42 | - | - | |
Blo06g00279 | 484 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Blo06g00279 | 484 | Gene3D | Protein tyrosine phosphatase superfamily | 166 | 363 | IPR029021 | - | |
Blo06g00279 | 484 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 174 | 430 | - | - | |
Blo06g00279 | 484 | CDD | PTP_PTEN | 181 | 344 | IPR045101 | GO:0016791 | |
Blo06g00279 | 484 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 184 | 347 | IPR029021 | - | |
Blo06g00279 | 484 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B | 174 | 430 | - | - | |
Blo06g00279 | 484 | MobiDBLite | consensus disorder prediction | 453 | 484 | - | - | |
Blo06g00279 | 484 | MobiDBLite | consensus disorder prediction | 459 | 484 | - | - | |
Blo06g00279 | 484 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 11 | 143 | - | - | |
Blo06g00279 | 484 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 287 | 297 | IPR016130 | GO:0016311|GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00279 | Blo-Chr6:15505319 | Blo17g00378 | Blo-Chr17:4194493 | 4.94E-47 | dispersed | |
Blo06g00279 | Blo-Chr6:15505319 | Blo13g00325 | Blo-Chr13:18585588 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo06g00279 | K01110 | - | jre:109009112 | 572.007 |