Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00279 ATGATGGAGACTCCATCTGGTGATTTACCATCTGAATCAAGTGTCAAAACATCTGCTGATAAAAATTTGACTTCTGATGTTTCATCACAAGATAATGCTGGCAGTCACTTAGCATCAAAGTTTTCTGCTTCTGGCGAATCATCTTGGGCTAGAAGTTTGAAATTTCCACAGCAATTGGGAGGAGAAGCAGAGCATCCAAAAGAAGGAAATGCCATGATGTCGACATTTGCACGTTTCACTGGTGGTTTTGGTTTGGGTGTTCCTTCAGTCACTTCAGAGCCAAATAAGGACAGTGCTGCAACGACTGCACAATATGGTGTCGTAGCGTCACTTACAAAAGGAATAGTTGATTCATCTCTTAGTGCTGTAAAAGCAATGCAGGTCAAGGCTCGACATATTGTGTCTCAGAAAAAAAGAAGATATCAGTCTTTGAAACTGATTGACTGTTTGCAGTTGTATAAAGAATACAACTCAGTAGTTCATTATTTTTGTTGCAAAAAACATCTGTTTTACTTCATTTCAGAAGGAGGTTTTGATTTAGATATGACTTATATCACCGAGAATGTCATTGCTATGGGATTCCCTGCTGGTGACATAAGCTCTGGGTTTTTTGGATATCTTGAGGGTTTTTATCGAAATCACATGGAAGAAGTGATCAAATTCTTTGAATCCCACCACCAGGGAAAGTACAAAGTATATAATCTTTGTTCAGAGCGGTTGTATGATGCTTCCTTGTTTGAAGGGAAGGTTGCGAATTTCCCATTTGATGATTATAACTGCCCACCTTTACATCTTATAAAATCATTTTGTCAAAGTGCGTATTCATGGCTAAAGGAGGACATTGAGAATGTTGTGGTTGTTCATTGTAAAGCTGGTATGGGAAGGACAGGCTTAATGATTTGTAGCCTTCTCTTGTTCATCAAGATGTTCCCAAAGGCTGAGGAAGCAATTAATTATTACAACCAGAAGAGATGTATTGATGGAAAGGCTTTGGTTCTCCCTAGTCAGATTAGGTATGTCAAATACTTTGAAAGCACTTTAACGTCTTCAAATGGAGAAAATCATCAAGGACGTAGGTGCATGCTTCGAGGTTTTCGGATTTACAAATGCCCTAATTGGCTTAGACCTTCCATTACAATTTCTGATCACCAAGCAGGAATTTTATTCTCGACTAGGAAACATCCAAAAACTAAGGATCTAATGCCAGAAGATTTCTGGCTTCGTGCAACAAAGAAAGGATTTGTGGTGTTTGCGCTACCTGGGGAACCTGGTCTAACTGAATTGATGGGAATCGCTGGATTAATTGGTGTTAGAGTAGTGGTTGTCGATGAAAAGAAGAGGGCTAGTTATGTAATCAAAAAACCTAAAAGAACCAGAAATGGAGGTGCAGGAAGAGATGATCTTGATCAAAAGGGAAGCATAGAAGAAGTCAAGGCCCTGGAAAGAAAAGATTGA 1455 39.18 MMETPSGDLPSESSVKTSADKNLTSDVSSQDNAGSHLASKFSASGESSWARSLKFPQQLGGEAEHPKEGNAMMSTFARFTGGFGLGVPSVTSEPNKDSAATTAQYGVVASLTKGIVDSSLSAVKAMQVKARHIVSQKKRRYQSLKLIDCLQLYKEYNSVVHYFCCKKHLFYFISEGGFDLDMTYITENVIAMGFPAGDISSGFFGYLEGFYRNHMEEVIKFFESHHQGKYKVYNLCSERLYDASLFEGKVANFPFDDYNCPPLHLIKSFCQSAYSWLKEDIENVVVVHCKAGMGRTGLMICSLLLFIKMFPKAEEAINYYNQKRCIDGKALVLPSQIRYVKYFESTLTSSNGENHQGRRCMLRGFRIYKCPNWLRPSITISDHQAGILFSTRKHPKTKDLMPEDFWLRATKKGFVVFALPGEPGLTELMGIAGLIGVRVVVVDEKKRASYVIKKPKRTRNGGAGRDDLDQKGSIEEVKALERKD 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 15505319 15509441 + BLOR16862 Blo06g00279 61572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00279 484 ProSiteProfiles Phosphatase tensin-type domain profile. 171 350 IPR029023 -
Blo06g00279 484 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 11 143 - -
Blo06g00279 484 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 285 324 IPR000387 GO:0016311|GO:0016791
Blo06g00279 484 MobiDBLite consensus disorder prediction 7 42 - -
Blo06g00279 484 MobiDBLite consensus disorder prediction 1 42 - -
Blo06g00279 484 Gene3D Protein tyrosine phosphatase superfamily 166 363 IPR029021 -
Blo06g00279 484 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 174 430 - -
Blo06g00279 484 CDD PTP_PTEN 181 344 IPR045101 GO:0016791
Blo06g00279 484 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 184 347 IPR029021 -
Blo06g00279 484 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 174 430 - -
Blo06g00279 484 MobiDBLite consensus disorder prediction 453 484 - -
Blo06g00279 484 MobiDBLite consensus disorder prediction 459 484 - -
Blo06g00279 484 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 11 143 - -
Blo06g00279 484 ProSitePatterns Tyrosine specific protein phosphatases active site. 287 297 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00279 Blo-Chr6:15505319 Blo17g00378 Blo-Chr17:4194493 4.94E-47 dispersed
Blo06g00279 Blo-Chr6:15505319 Blo13g00325 Blo-Chr13:18585588 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00279 K01110 - jre:109009112 572.007