Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00321 ATGCGGACACTTTGTGACGCTTGTGAAAGCGCTCCCGCCGCTGTCTTTTGCGCCGCCGATGAAGCCGCCCTCTGCCGATCCTGTGACGAGAAGGTTCATATGTGCAACAAGCTCGCAAGCCGGCATGTTCGAGTTGGCCTAGCAAAGCCCTGTGATGTCAATCGGTGTGATATATGTGAAAATGCACCTGCTTTCTTTTACTGCGAGATTGATGGGAGTTCATTGTGTTTGCAATGCGATATGATTGTTCATGTTGGAGGTAAAAGAACACATAAAAGATACCTTCTACTAAGGCAGAGAGTTGAGTTTCCGGGCGATAAAGCTATTAATATCAATGATTCTTCTCCACAATCAATGGATCGAGGCGAAACCAGGAGACAGAGTCAGCAAAATAAGGGGGCAGTGGGGGACAAGCGAGAAAATCATATGATATCTCCACCAAATGCTGATGGACATTCGAAGAACGGAGCTAAAATGATTGATCTGAATATGAAGCCTCATAGAATTCATGGCCAAGCTTCAAATAATCAGGTTCAACAGGATTTCTTTTCAGAGTGCCAAACAAGTCCTTCCCATCATTGTCATCAGGTTGTGCTAAAAGTTGTTGTTGCGATTGCTGTGGCAAGAGCTGAAATTGCGTTGCACTCTGAACCAATTGCCCTTGGATTTGAGCACCCAAAATTGGTTGTATTTGGTGAAGTGCAGTTATAG 711 44.87 MRTLCDACESAPAAVFCAADEAALCRSCDEKVHMCNKLASRHVRVGLAKPCDVNRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHKRYLLLRQRVEFPGDKAININDSSPQSMDRGETRRQSQQNKGAVGDKRENHMISPPNADGHSKNGAKMIDLNMKPHRIHGQASNNQVQQDFFSECQTSPSHHCHQVVLKVVVAIAVARAEIALHSEPIALGFEHPKLVVFGEVQL 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18407264 18411608 + BLOR16904 Blo06g00321 61614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00321 236 CDD Bbox1_BBX-like 4 47 - -
Blo06g00321 236 Pfam B-box zinc finger 3 42 IPR000315 GO:0008270
Blo06g00321 236 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Blo06g00321 236 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Blo06g00321 236 SMART bboxneu5 1 47 IPR000315 GO:0008270
Blo06g00321 236 SMART bboxneu5 51 96 IPR000315 GO:0008270
Blo06g00321 236 MobiDBLite consensus disorder prediction 110 131 - -
Blo06g00321 236 CDD Bbox1_BBX-like 56 96 - -
Blo06g00321 236 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 188 - -
Blo06g00321 236 MobiDBLite consensus disorder prediction 107 154 - -
Blo06g00321 236 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Blo06g00321 236 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 188 - -
Blo06g00321 236 Gene3D Classic Zinc Finger 2 96 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g00321 Blo16g00074 CCT
Blo04g00894 Blo06g00321 CCT
Blo06g00321 Blo16g00074 ECH
Blo04g00894 Blo06g00321 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00894 Blo-Chr4:10317171 Blo06g00321 Blo-Chr6:18407264 7.47E-77 dispersed
Blo06g00321 Blo-Chr6:18407264 Blo07g00980 Blo-Chr7:29282753 4.55E-22 dispersed
Blo06g00321 Blo-Chr6:18407264 Blo16g00074 Blo-Chr16:2107024 7.89E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12464 PF00643 zf-B_box 2.10E-05 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00321 - - zju:107424379 288.115