Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00322 ATGGCTTTTCTGCTGCTCTTTGTGGTGCTATGCCCCCCCATTTCTGTTTTCGCCGACCAGAGTTTTGAGGTCGAAGCGGAGATTGAGGCGCTAATGGCGTTTAAATTAAATCTTTACGATCCTCTAGGTGTTTTGACGGGATGGGATCCGACATCGCCCGTCGCTCCCTGCGACTGGCATGGGATTTTTTGCACTGGAAGCAGAGTTACTGGGGTCCGTTTGCCTCGGGCGCAACTGGAGGGCCGAGTTAGCGACGAGCTCGGTAATCTTAGGATGTTGCAAAAGCTGAGTCTTCGTTCCAACTCCTTCAACGGCTCCATTCCGTCTTCTCTCTCGAAATGCACGCTTTTGCAGGCAGTGTTCTTGCAGTACAACTCGTTTGCCGGTAGTCTCCCGTCGCAGATCGGAAACCTTACTGGTCTTGAAATCTTCAATGTGGCGCAGAACCATCTTTCTGGAAGAATTCCAAAAGACCTCCCTCGGACTCTCAAGTACCTAGATCTTTCATCGAATATGTTCTCCGGTGAGATTCCGAGAAGTATGGCTAACTCGACTCAGCTTCAGCTCATTAACCTCTCTTTTAACCAGTTTAGCGGACAGATTCCGGCGAGCCTAGGTTTGCTTCAAGAGCTTCAATACTTTTGGCTGGATGATAACATTTTCAAAGGTACTCTGCCTTCTGCAATTGCTAATTGTTCCTCGCTCGTTCATTTGAGCGTTGATGGCAATGGACTCGAAGGTGTGATTCCGGCAGCCATTGGAGCTCTTCCCAGTCTTCAAGTGTTGTCTCTTTCGCAGAATAGGTTATCTGGACGTTTCCCATACTCTATTTTCTGCAATGTCTCGGTACATCCGCCATCACTCCGCATCGTTCAGCTTGGGTTTAATGCGTTTACGAAGATTGATGAGCCGGGGATAGCACTGTGTTATAGTGTTCTACAAGTTCTTTATCTTCAACATAATCAATTACGAGGGCCCTTCCCACCGTCTTTAACACGTATATCAACTTTATCTCATCTAGACGTTTCGGATAATTTCTTCTCTGGAGTAGTTCCACCCGAAACTGGGAACTTCTTTAGATTGGTGGAGCTAAAAATGGCGAATAATTCATTCGAGGGAGGGATTCCAGAAGAAATAAAAAAATGTAGCTCACTGACTGTTCTTGATTTTGAAGGAAATCGCTTTGCTGGAGAGATTCCCGCATTCTTTGGTGAAATGAGAGGCTTGAATGTGCTGATTCTGGGGAGAAACCAGTTTGTGGGAACCATTCCAGAGAGTTTTCGCAATCTCTTGGAGCTTAAAAGCCTGGATTTGGGAGGAAATAGTTTGAGTGGGTGCTTTCCTCAGGTTTTAATGGGGCTGGAAAATCTGACCTTTATCGATCTCAGCAGGAACAATTTGAGCTGTGAAATTCCTACAGGCATTGGGAATCTAACTAGGCTGGTGAATCTGAATCTAAGTGCAAATGGCTTTTCCGGGAAGATTCCGGCCAGCTTGGGAAACCTTTTCTTGTTAACTACCCTTGATTTGAGCAAACAGAAATTGTCAGGTAAGTTGCCATTTGAGCTTTTCGGTCTGCCAAATGCGCAGGTAATAGCTATCCAGGAGAACATGTTATCTGGCGATGTTCCTGAAGGATTCAGTAGTTTGATGAGCTTGCGCAGTTTGAATCTCAGTTCAAATCACTTTTCTGGTCAAATTCCAGCTTATTATGGTTTTCTCCAATCACTAAGTGTTCTCTCGTTGTTCGGCAATCACATAATGGGGACGATTCCACCCGAGCTGGGCAATTGCTCAAGCCTTCAAGTTTTTGAGGCTCGATTCAACTTGTTGAGTGGAAACATTCCGGAGAATCTCTCACAGCTATCTCGTTTGAAGGAGCTTGATTTGGGTCATAATAATTTGAGTGGGGAAATTCCAGAGGAAATTTCCAGGTGCTTGTCATTAAACACTTTGCTGCTAGACTCAAATGATCTATCCGGTACCATTCCAAGCTCCTTGTCCAAGCTTTCAAACCTCACAACGTTAGACCTCTCTTTTAACAACTTGAGTGGAGCAATTCCTGCTAACATTAGCTCGATTAGTGGATTGGTGAACTTTAATGTTGCAAATAACGATCTCGAAGGCGAGATTCCCGCACCTTTAGGTTCTCGATTTGATAATTCATCATTATTCGCAGGAAATTCAAAGTTATGCGGTAAGCCGTTGAATCGAAAATGTGATAAAAACGATAGAAGAAAGAAGCTAATTCTGTTAATTGCTGTGGCTGCTAGTGGAGCTATCCTACTGTCAGTGTGTTGTTGCTTTTACATTTTTAGTCTCTTCATTTGGTGGAAGAGACTGAAAGAGGGGGTGTATGGGGAGAAGAAGAGGAGCCCAGGAAGGACCAGCATGGGAGCTAGTAGTGGGCGTGGAAGCACTGACGGTGATGGACCGAAAGTTCTCATGTTTGTTAACAAAATCACTCTCGCAGACACAATTGAAGCGACTCGGCATTTTGACGAAGAGAATGTTCTTAGTAGAAGTCGATATGGGCTGGTTTTCAAAGCTAGCTACAACGATGGAATGGTGCTCTCGATTCGCCGCCTCCCAAATGGGTCTCTGACCGAAAATGTGATCAGAAAAGAAGCCGAATTATTGGGTAAAGTGAAGCATCGAAATCTAACTGTTCTTCGTGGATACTACGCAGGGCCAGATTTGAAACTTCTCGTGTACGACTACATGCCGAATGGAAATCTTGCAACTCTTCTTCAAGAAGCGTCCCACCAAGATGGTCATGTTCTGAATTGGCCGATGCGACATCTTATTGCCCTTGGAATTGCTCGTGGTCTGGCTTTCCTCCACACGTCCTCCATTGTCCACGGCGATGTTAAGCCACAAAATGTTCTGTTTGATGCTGATTTCGATGCCCATTTGTCTGATTTTGGGCTAGATAGGCTTATGGTTGCAGCTCCGGCTGAGGCTTCTTCCTCCACCTCGGTTGGCACATTGGGCTACATTTCTCCGGAATTAGCTGTTACAGGGGAACCCACAAAGGAATCAGATGTCTACAGCTTTGGAATCGTCTTACTTGAGCTGTTGACAGGGAAAAGATCAGTGATGTTTGGAGAAGATGAAGATATCGTGAAGTGGGTGAAGAAAGAATTGCAAAGTGGACAGATCAATGAGCTTTTGGAGCCCGGATTGCTTGAGCTAGACCCTGAATCATCAGAGTGGGAGGAGTTTTTGCTAGGCGTTAAAGTTGGGTTGCTTTGTACTGCACCAGAGCCTCTTGATCGGCCGACCATGACGGATATAGTTTTCATGCTAGAAGGTTGCCGTGTAGGACCTGAAATTCCGTCCTCGGCAGATCCAACCACTCAACCTTCTCCGACGTGA 3378 45.5 MAFLLLFVVLCPPISVFADQSFEVEAEIEALMAFKLNLYDPLGVLTGWDPTSPVAPCDWHGIFCTGSRVTGVRLPRAQLEGRVSDELGNLRMLQKLSLRSNSFNGSIPSSLSKCTLLQAVFLQYNSFAGSLPSQIGNLTGLEIFNVAQNHLSGRIPKDLPRTLKYLDLSSNMFSGEIPRSMANSTQLQLINLSFNQFSGQIPASLGLLQELQYFWLDDNIFKGTLPSAIANCSSLVHLSVDGNGLEGVIPAAIGALPSLQVLSLSQNRLSGRFPYSIFCNVSVHPPSLRIVQLGFNAFTKIDEPGIALCYSVLQVLYLQHNQLRGPFPPSLTRISTLSHLDVSDNFFSGVVPPETGNFFRLVELKMANNSFEGGIPEEIKKCSSLTVLDFEGNRFAGEIPAFFGEMRGLNVLILGRNQFVGTIPESFRNLLELKSLDLGGNSLSGCFPQVLMGLENLTFIDLSRNNLSCEIPTGIGNLTRLVNLNLSANGFSGKIPASLGNLFLLTTLDLSKQKLSGKLPFELFGLPNAQVIAIQENMLSGDVPEGFSSLMSLRSLNLSSNHFSGQIPAYYGFLQSLSVLSLFGNHIMGTIPPELGNCSSLQVFEARFNLLSGNIPENLSQLSRLKELDLGHNNLSGEIPEEISRCLSLNTLLLDSNDLSGTIPSSLSKLSNLTTLDLSFNNLSGAIPANISSISGLVNFNVANNDLEGEIPAPLGSRFDNSSLFAGNSKLCGKPLNRKCDKNDRRKKLILLIAVAASGAILLSVCCCFYIFSLFIWWKRLKEGVYGEKKRSPGRTSMGASSGRGSTDGDGPKVLMFVNKITLADTIEATRHFDEENVLSRSRYGLVFKASYNDGMVLSIRRLPNGSLTENVIRKEAELLGKVKHRNLTVLRGYYAGPDLKLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHTSSIVHGDVKPQNVLFDADFDAHLSDFGLDRLMVAAPAEASSSTSVGTLGYISPELAVTGEPTKESDVYSFGIVLLELLTGKRSVMFGEDEDIVKWVKKELQSGQINELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPEPLDRPTMTDIVFMLEGCRVGPEIPSSADPTTQPSPT 1125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18467782 18471159 + BLOR16905 Blo06g00322 61615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00322 1125 Pfam Leucine Rich Repeat 624 646 IPR001611 GO:0005515
Blo06g00322 1125 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Blo06g00322 1125 Pfam Protein kinase domain 843 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00322 1125 ProSiteProfiles Protein kinase domain profile. 833 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00322 1125 Gene3D Ribonuclease Inhibitor 281 472 IPR032675 -
Blo06g00322 1125 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1121 - -
Blo06g00322 1125 SUPERFAMILY L domain-like 25 302 - -
Blo06g00322 1125 SMART serkin_6 833 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00322 1125 Gene3D Ribonuclease Inhibitor 473 749 IPR032675 -
Blo06g00322 1125 Gene3D Phosphorylase Kinase; domain 1 811 907 - -
Blo06g00322 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 952 964 IPR008271 GO:0004672|GO:0006468
Blo06g00322 1125 SMART LRR_typ_2 622 646 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 90 114 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 430 453 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 138 162 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 670 694 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 454 478 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 574 598 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 256 280 IPR003591 -
Blo06g00322 1125 SMART LRR_typ_2 406 429 IPR003591 -
Blo06g00322 1125 SUPERFAMILY L domain-like 476 736 - -
Blo06g00322 1125 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Blo06g00322 1125 Pfam Leucine Rich repeat 670 685 IPR001611 GO:0005515
Blo06g00322 1125 Gene3D Transferase(Phosphotransferase) domain 1 908 1111 - -
Blo06g00322 1125 MobiDBLite consensus disorder prediction 788 811 - -
Blo06g00322 1125 SMART LRR_sd22_2 670 699 - -
Blo06g00322 1125 SMART LRR_sd22_2 622 645 - -
Blo06g00322 1125 SMART LRR_sd22_2 430 456 - -
Blo06g00322 1125 SMART LRR_sd22_2 256 283 - -
Blo06g00322 1125 SMART LRR_sd22_2 310 339 - -
Blo06g00322 1125 SUPERFAMILY RNI-like 225 540 - -
Blo06g00322 1125 Pfam Leucine rich repeat 407 467 IPR001611 GO:0005515
Blo06g00322 1125 Gene3D Ribonuclease Inhibitor 179 280 IPR032675 -
Blo06g00322 1125 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 3 1121 - -
Blo06g00322 1125 SUPERFAMILY Protein kinase-like (PK-like) 820 1118 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00893 Blo-Chr4:10285800 Blo06g00322 Blo-Chr6:18467782 0 dispersed
Blo06g00322 Blo-Chr6:18467782 Blo18g00787 Blo-Chr18:22736496 0 dispersed
Blo10g00404 Blo-Chr10:6907447 Blo06g00322 Blo-Chr6:18467782 2.55E-58 dispersed
Blo14g00108 Blo-Chr14:750239 Blo06g00322 Blo-Chr6:18467782 2.87E-29 transposed
Blo05g00823 Blo-Chr5:29975002 Blo06g00322 Blo-Chr6:18467782 1.67E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84322 PF00069 Pkinase 3.90E-33 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00322 - - mnt:21409357 1557.73