Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00331 ATGGCCGGGTTTTTCTCGCTAGGGGGAGGAAGAGGATCAACAAGTAACCAGAATCAAGAACAAGCAAACCCTACGAACGAAATTAATCCAGAGAGCTTGTTTTGGTACAGAAACAGCGATGATGTACCATCTTACAGAAGCTTCGAGCTATGTCAAAACCAAAATCTCTACTCATGGGGATTGGGTCCAAGCCGGAGCGCTCTGAACATCTCCGATGCGTCTCCAGCGAGATCGTCGCTCCTGATGACGATGTCGTCCGGCGGAGGTTCGATGAGTTGCCAAGATTGCGGGAATCGGGCCAAAAAGGATTGCGTCCACATGCGATGTAGAACATGTTGTCAAAGCCGAGGGTTCGAGTGCCAAACCCACGTCAAAAGCACTTGGGTTCCGGCCTCTAAGCGCCGCGAGCGTCAAGCTCAGCTGGCGGCCAACCTGCAAAATAAAGGTCGGGGAGCGACATCGCAGCGGTTCAGAGAGAATCCATCGTCTTCTACCTCACTAGCCTGCACTCGTATACCCACTAATGCCTCTGGTACAGAGGAGGGAGCTTTTCCGGCGGAAGTGACCTCGTCGGCGGTTTTTCGGTGCGTTCGAGTGAGCTCAATGGAAGATCCGGACGAGCAGTACGCGTATCAAACTGCTGTGAACATCGGCGGGCATGTTTTCAAGGGCATTCTCTACGACCAAGGGCCGGAGAGCGTAAACTACATTCCTGGAGAGAGGTCCTCCGGCGGAAGTCGAGTCCAACCGCTTAACTTTATCCCCGCGGGAGCCACAACCACCGCCTCTGCAACCAGCACGAGTGGAGTTTCCGGTTCTTTGTTGGATCCTACTCTATACCCTACTCATCTCAATACTTACATTTCTGGTACGCAATTCTTCCTTCCCCCAAGACCTTGA 900 52.89 MAGFFSLGGGRGSTSNQNQEQANPTNEINPESLFWYRNSDDVPSYRSFELCQNQNLYSWGLGPSRSALNISDASPARSSLLMTMSSGGGSMSCQDCGNRAKKDCVHMRCRTCCQSRGFECQTHVKSTWVPASKRRERQAQLAANLQNKGRGATSQRFRENPSSSTSLACTRIPTNASGTEEGAFPAEVTSSAVFRCVRVSSMEDPDEQYAYQTAVNIGGHVFKGILYDQGPESVNYIPGERSSGGSRVQPLNFIPAGATTTASATSTSGVSGSLLDPTLYPTHLNTYISGTQFFLPPRP 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 19623522 19624814 + BLOR16914 Blo06g00331 61624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00331 299 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 92 134 IPR006510 -
Blo06g00331 299 MobiDBLite consensus disorder prediction 1 30 - -
Blo06g00331 299 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 295 IPR007818 GO:0003700|GO:0006355
Blo06g00331 299 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 183 231 IPR006511 -
Blo06g00331 299 MobiDBLite consensus disorder prediction 146 166 - -
Blo06g00331 299 MobiDBLite consensus disorder prediction 9 30 - -
Blo06g00331 299 PANTHER PROTEIN SHORT INTERNODES 1 295 - -
Blo06g00331 299 Pfam Domain of unknown function (DUF702) 90 232 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00900 Blo06g00331 CCT
Blo04g00900 Blo06g00331 ECH
Blo05g00815 Blo06g00331 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01581 Blo-Chr1:55617084 Blo06g00331 Blo-Chr6:19623522 3.39E-85 dispersed
Blo04g00900 Blo-Chr4:10559249 Blo06g00331 Blo-Chr6:19623522 2.44E-80 dispersed
Blo06g00331 Blo-Chr6:19623522 Blo18g00791 Blo-Chr18:22983635 1.49E-87 dispersed
Blo05g00815 Blo-Chr5:29760986 Blo06g00331 Blo-Chr6:19623522 1.65E-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12465 PF05142 DUF702 2.90E-62 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00331 - - jre:108993505 340.887