Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00398 ATGGACAATGAACTTTTTTTCAACGGTGGTCACCCACCGTCGTCCCCCTACGCTTTTGAGTCAACTTCTGTAATGCCCGTTTGGCACCAGCTAGCTCCGCCGCCCGATTGCTCGCCGGAGAAATCCTTGGACTCCTTTTTTGATCCTTTCTCATCTGTCATCCCGTCGCCGGAGGCGTCCAATTCTCACGTTTCCGGCGAAGGGTTTAAAATTAGGGAGCTGATAGGGAAGCTCCAAAAATTTCCTAGTTACAACACTACTCCATTGAGCTCACCTCCGAAGCTTCATTCTCCAATAATGGCGGCGAATTCTAATTTAGCGGAATTCTCAGGTGATCCTGGATTTGCAGAGAGGGCGGCGAGGTTTTCTTGCTTCGGAAGTAAGAGTTTCAATGGTCGAGCAAGTCAGTTTCCTTCTTACAGATCTACTCCATCAATGGCGGACGGAAAGCTTTCTCGAGTTTCAAGCAGCCCCTCACTCAAAGCATTTGGATCAAACTCTTCGTTGGAATCCACGGTTTCAGAGCAAATCTCAAACGAGTGGAATTGCAGAAAAAGAAAAGCGAATTCAAAGGGAAAACCGAAAGAACCCATTCAGTTTGACGAGAATTCAAATGGTAAGCGGAGCAAAGTGAGCGAAGAGAAGAGGTATGGAAATGGCGGCGAGAAAACAGAGGAAGAAGGCGATGGAAATAGTTGCAAACACGAAGAGAAAACAAGCAAGACGAAGAGTAACTCTAAACCTCCAGAGCCTCCAAAAGACTACATCCATGTCAGAGCCAGAAGAGGCCAAGCCACTGACAGCCATAGCCTAGCAGAAAGAGTAAGAAGAGAGAAGATAAGCGAAAGAATGAAGCTTCTTCAAGACCTCGTGCCAGGCTGCAACAAAGTCACCGGAAAAGCGCTAATGCTCGACGAAATTATAAACTACGTTCAGTCATTACAACGTCAAGTTGAGCTCCTTTCCATGAAGTTGGCTTCTGTCAACACCCGGAAGGAATCCGCCATGGATTCTCTATTCTCAAAAGAAGTGTTTGAATCTAACAATTCTTTGCCAAATCCAATGTTTGGAAGTGATTCTTCACCATCTTCCATTTATGGACAGCATAATCTTGGCCTGCAGTTACCTTTGATAAATGAAATTAATGAAAATTTCAGTCAGTTCAAATGGGAATTGGCCAATCTCAAACCAGAGACCCAGCATCCAAGTTTTCTTTAG 1218 45.07 MDNELFFNGGHPPSSPYAFESTSVMPVWHQLAPPPDCSPEKSLDSFFDPFSSVIPSPEASNSHVSGEGFKIRELIGKLQKFPSYNTTPLSSPPKLHSPIMAANSNLAEFSGDPGFAERAARFSCFGSKSFNGRASQFPSYRSTPSMADGKLSRVSSSPSLKAFGSNSSLESTVSEQISNEWNCRKRKANSKGKPKEPIQFDENSNGKRSKVSEEKRYGNGGEKTEEEGDGNSCKHEEKTSKTKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVELLSMKLASVNTRKESAMDSLFSKEVFESNNSLPNPMFGSDSSPSSIYGQHNLGLQLPLINEINENFSQFKWELANLKPETQHPSFL 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23064680 23066366 - BLOR16981 Blo06g00398 61691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00398 405 MobiDBLite consensus disorder prediction 135 272 - -
Blo06g00398 405 PANTHER - 93 370 - -
Blo06g00398 405 Gene3D - 261 337 IPR036638 GO:0046983
Blo06g00398 405 SMART finulus 270 320 IPR011598 GO:0046983
Blo06g00398 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 264 314 IPR011598 GO:0046983
Blo06g00398 405 Coils Coil 311 331 - -
Blo06g00398 405 Pfam Helix-loop-helix DNA-binding domain 268 315 IPR011598 GO:0046983
Blo06g00398 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 262 330 IPR036638 GO:0046983
Blo06g00398 405 MobiDBLite consensus disorder prediction 135 179 - -
Blo06g00398 405 CDD bHLH_AtBPE_like 254 339 - -
Blo06g00398 405 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 93 370 IPR024097 GO:0006355
Blo06g00398 405 MobiDBLite consensus disorder prediction 180 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00412 Blo-Chr1:4665092 Blo06g00398 Blo-Chr6:23064680 7.97E-44 dispersed
Blo02g00401 Blo-Chr2:4969557 Blo06g00398 Blo-Chr6:23064680 2.79E-70 dispersed
Blo06g00398 Blo-Chr6:23064680 Blo07g00067 Blo-Chr7:975466 1.10E-81 dispersed
Blo15g00288 Blo-Chr15:3173837 Blo06g00398 Blo-Chr6:23064680 3.38E-44 dispersed
Blo16g00907 Blo-Chr16:36940811 Blo06g00398 Blo-Chr6:23064680 1.81E-22 dispersed
Blo16g01072 Blo-Chr16:39276599 Blo06g00398 Blo-Chr6:23064680 4.01E-45 dispersed
Blo05g00410 Blo-Chr5:5195203 Blo06g00398 Blo-Chr6:23064680 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12470 PF00010 HLH 2.90E-06 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00398 - - zju:107426586 378.637