Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00409 ATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAGTTTTTAAGAAGAAAATGCGTCAGAGGCTGTGTTTTTGCGCCTTATTTCTGCCATGAACAAGGCGCTTCTCACTTTGCCGCCATTCACAAGGTTTTCGGAGCTAGCAATGTCTCGAAGCTTCTCGCCCATCTTCCTGTCTCCGATCGCTCTGAAGCCGCCGTTACGATCTCTTATGAAGCTCAGGCCCGCCTCCAAGACCCGATTTACGGCTGCGTTTCTCATATCTTTGCTCTTCAACAGCAGGTAGTGAACTTGCAGGCGCAATTAACTTCTTTGAAAGAACAAGCTGCTCAAAGCATGTTCAACAGTTGTTCTACTGTAAACCCTAGTGAGAATTTTTGTGGGATATTTCCTCCTCATCCACAAGATCTTTCGAGTTTGGTGAAGTTGGAAAAATCCAGTGAAATGTCCCAATTTCATCAGAATATCTGCCCTGCCAACTCTACTGTGCCTTACTACGATGAGAAGAGCATTATGGAATCTTACCCTATGGAGAATTTGTTCGATCCAGAAAAAAATCTCAGCCTGGGGGAGACCTCTAATTCCACATCTTCTTTTGAAATGCAAACCGGCAACAGGCAGGAATGGAGTTTCGGAGATGTTGACGAGCTTCAGTCCATGGCTTTCCCCTACTTTCACCATTGA 681 45.67 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLAHLPVSDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLTSLKEQAAQSMFNSCSTVNPSENFCGIFPPHPQDLSSLVKLEKSSEMSQFHQNICPANSTVPYYDEKSIMESYPMENLFDPEKNLSLGETSNSTSSFEMQTGNRQEWSFGDVDELQSMAFPYFHH 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 23612891 23613655 + BLOR16992 Blo06g00409 61702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00409 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 225 - -
Blo06g00409 226 Coils Coil 87 107 - -
Blo06g00409 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 225 - -
Blo06g00409 226 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Blo06g00409 226 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00396 Blo06g00409 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00409 Blo-Chr6:23612891 Blo12g00316 Blo-Chr12:18573057 4.62E-55 dispersed
Blo05g00396 Blo-Chr5:4898563 Blo06g00409 Blo-Chr6:23612891 1.67E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12472 PF03195 LOB 1.00E-36 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00409 K13945 - vvi:100266975 281.182