Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00417 ATGGATTGTATGAACATTAATGGCGTTGGAGACGTCGTGACAGCAAAGAATTCTAAGGCCTTGAATGATGTGGGGAGCATTAGCAATAAAGACATGCTTTTTCGAGCAGATATGATTGATTTTAAGAACTGGGATATTCAGCTAGAGAAGCACTTGAGCCGGGTTTGGTCGAGGGGCAGAGAAGCCCCGGCAAAGAAGGAAGATTGGGAGATTGATTTGTCTAAATTGGATATAAGATATGTTATTGCTCCTGGTACTTTTGGAATTGTTTATAGAGGCGTATATGATGGCCACGATGTTGCAGTCAAAGTGTTGGATTGGGGGGAGGATGGAATTGCTACAGCGGCTGAAATCTCTGGTCTTCGGGCTTCATTCCGGCAAGAAGTTGCTGTTTGGCATAAGCTTGACCATCCTAATGTTGCAAAGTTTTTTGGAGCTTCAATGGGAACTTCCAATCTGAAAATTCCTACAAAAGGCACATCCGGTGATAGTCTTAACACTTTTCCCTCGAGGGCTTGTTGTGTTGTTGTCGAATATCTTGCGGGTGGAACACTAAAAAACTTCTTGATTAGAAATAGAAGAAAGAAACTAGCATTTAAAGATGTTATTCAACTTGCTTTGGATCTCTCAAGAGGTTTGAGCTATCTTCATTCAAAAAAGATAGTGCACAGAGACATAAAAACAGAAAACGTGTTGTTAGATGGTCATAGAACTTTGAAAATCGTTGATTTTGGTGTGGCTCGTGTTGAAGCTCAGAACCCACGAGACATGACCGGAGAGACTGGCACTCTTGGTTACATGGCTCCAGAGGTTCTGGATGGTAAGCCTTACAATCGGAAATGTGACGTTTATAGCTTGGGCATATGCCTGTGGGAAACATATTGCTGTGAGATGCCATATCCCGATCTTACTTTTGCCGAAGTTTCATCTGCGGTTGTTGGACAGAATTTACGGCCGGAGATACCGAGGTGTTGCCCCCATTCATTGGCAAACATAATGAAAAAATGTTGGGATTCAAACCCGGAGAAACGACCAGAAATGGATGAGGTCGTGCGGCTGTTGGAAGCAATCGATACGAGCAAGGGAGGTGGCATGATTCCTGACGATCAGGTGTCTGCCTGCTTCTGTTTCGGCACACATCGTGGCCCC 1149 44.04 MDCMNINGVGDVVTAKNSKALNDVGSISNKDMLFRADMIDFKNWDIQLEKHLSRVWSRGREAPAKKEDWEIDLSKLDIRYVIAPGTFGIVYRGVYDGHDVAVKVLDWGEDGIATAAEISGLRASFRQEVAVWHKLDHPNVAKFFGASMGTSNLKIPTKGTSGDSLNTFPSRACCVVVEYLAGGTLKNFLIRNRRKKLAFKDVIQLALDLSRGLSYLHSKKIVHRDIKTENVLLDGHRTLKIVDFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSLGICLWETYCCEMPYPDLTFAEVSSAVVGQNLRPEIPRCCPHSLANIMKKCWDSNPEKRPEMDEVVRLLEAIDTSKGGGMIPDDQVSACFCFGTHRGP 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24051728 24053790 - BLOR17000 Blo06g00417 61710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00417 383 SUPERFAMILY Protein kinase-like (PK-like) 60 354 IPR011009 -
Blo06g00417 383 Pfam Protein tyrosine and serine/threonine kinase 79 354 IPR001245 GO:0004672|GO:0006468
Blo06g00417 383 SMART serkin_6 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00417 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Blo06g00417 383 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 18 376 - -
Blo06g00417 383 Gene3D Transferase(Phosphotransferase) domain 1 182 365 - -
Blo06g00417 383 PRINTS Tyrosine kinase catalytic domain signature 281 303 IPR001245 GO:0004672|GO:0006468
Blo06g00417 383 PRINTS Tyrosine kinase catalytic domain signature 215 233 IPR001245 GO:0004672|GO:0006468
Blo06g00417 383 PRINTS Tyrosine kinase catalytic domain signature 325 347 IPR001245 GO:0004672|GO:0006468
Blo06g00417 383 PRINTS Tyrosine kinase catalytic domain signature 177 190 IPR001245 GO:0004672|GO:0006468
Blo06g00417 383 ProSiteProfiles Protein kinase domain profile. 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00417 383 CDD STKc_MAP3K-like 82 354 - -
Blo06g00417 383 Gene3D Phosphorylase Kinase; domain 1 64 158 - -
Blo06g00417 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 18 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00528 Blo-Chr2:8763073 Blo06g00417 Blo-Chr6:24051728 0 dispersed
Blo06g00417 Blo-Chr6:24051728 Blo15g00272 Blo-Chr15:2938354 0 dispersed
Blo05g00373 Blo-Chr5:4449380 Blo06g00417 Blo-Chr6:24051728 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84326 PF07714 PK_Tyr_Ser-Thr 2.40E-57 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00417 - K01968 mcha:111018484 651.744