Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00423 ATGAACGGCACTTTCTTCTTCAAAAATACTTCTGCTAGGAAGAGGTGGCGATTGGCCTTTGCAGCAATCTACTGTCTTCGAGTCATACTGTCTATTGCCAAAGACAGTATATCCAAAAGAAATGACAATGGAGTTTCGAAGTCATGTTCTTACACCATCCGTGATTTTGAACCATCCTTGACTTTCACTTATGGCACGGTATCTGGCATCCAAAAACCAGAAATTTTGAGTTATAGTCAGGCTCAAAGAAGATGGCGCATTGTTTATGTGACAATTTCCTTTGTACAAGTCATGGTCTCCCACTCCAGAAAGATCAAATCAGAAGAGGATAATTATTACAGCTCGGAGACGTTGGAGGAGAACCTTCCTATCATACTTGAAGTTGATCCACCAAGTAGTAGCAATCCACGGGAGATCAAAATAACAGAAACTGCAATTGATGGAGCAAAACTAGCTGAAGTGGTGAGAGATAAAAACTTGAAAGCCCTTCATGAGCTTGGAGAAGTCAAAGGGCTTGCTTCTGCCCTTAAGACAAATCTAGAGAAAGGAATCAATGGAGATGATGCTGAATTGAGAAGCCGTCGAGAGATGTTTGGTTCAAACACCTACCACAAGCCACCTCCAAAAGGGTTCATTTATTTTGTGCTGGAAACTTTCAAGGACATCACCATTCTCATTCTACTAGTCTGTGCTGTCGTGTCTCTAGGTTTTGGCATCAAAGAACATGGGGTGAAAGAAGGCTGGTATGAAGGAGGAAGTATAGCTGTAGCGGTCCTTTTAGTTGTTGTTGTTTCTGCAAGCAGTAACTTCAGACAGGAAAATCAATTCGACAAGTTGTCAAAAATAAGCAACAACATCCGAGTAGAAGTACTGAGAGACAGCCGACGCCAACAAATTTCTATATTTGATGTTGTAGTTGGAGACATAGCATTCCTCAAGATTGGAGATCAAATTCCAGCCGACGGGTTGTTCTTAGACGGCCACTCTTTGCAAGTGGACGAATCAAGCATGACAGGAGAGAGTGACCACGTGGAAATAAATTCCACTCTAGATCCATTCCTATTATCTGGTTCAAAGGTGGTAGATGGGTATGGTAGGATGCTAGTCTCATCAGTGGGCATGAAAACGGCATGGGGGGAAATGATGAGCTCAATAACTCATGAGAATGCAGAGCAAACACCACTACAAGTTCGACTAAATACCTTAACATCTTCTATTGGAAAGGTTGGCCTCTCAGTAGCACTTTTAGTCCTCCTAGTTCTATTGGTACGCTATTTCAATGGGAATACAACAGATGAGAATGGGAATAAAGAGTATAATGGTACCAGAACAGAAATAAATGATGTATTCGATGCAATTATCCGCATTATTGCCACTGCAGTCACTATTGTGGTGGTAGCAATCCCAGAAGGATTGCCATTGGCTGTCACGCTCACACTTGCTTACTCCATGAAACGAATGATGGCGGATCAAGCAATGGTGAGAAAACTTTCAGCTTGTGAGACGATGGGATCCGCAACAGTCATTTGCACTGACAAAACAGGTACTTTGACATTGAATAAAATGAAGGTAACCAAGTTTTGGTTAGGCCAGTCTTTCCAACAAGATGATTCTTCCGAAATAATTGCACAAAATATTTATGAGTTAATATATCAAGCAGTAAGCTTCAACACTACTGGAAGTGTTTACAAACCATTACCAGGATCCATACCTGAAATTTCTGGTAGTCCAACTGAAAAGGCGATCCTTTCTTGGGCTATTTTAGAGTTGGGAATGGACATGGAAAAGGTGAAGAAATCTCATACCATCCTTTATGTAGAAACCTTCAACTCAGACAAGAAAAGGAGTGGAGTTGCAATTAAAAAAGAGTCCGATAGAACCATTCACGTGCATTGGAAAGGAGCTGCAGAGGTTGTACTAGCAATGTGTTCCGACTATTATGAAAGCGATGGAACCATAAAGCCTCTCGACGAAGAAAAACGAAGCATAATCGAACAAATAATCCAAGGCATGGCAGCCAGTTCCCTCCGATGCATTGCTTTTGCTCATAGACAAATTTCAGAGGAAGAAATTTGTTGTAACGAAGATGATGGCACCCGCCGAAGGCTCAAAGAAGATGATTTTACGTTGCTGGGGATTATAGGTATGAAGGATCCATGTCGACCAGGGGTCAAGAGCGCAGTACAATCATGCAAATCGGCAAGAGTTTCAATCAAAATGATTACAGGAGATAACATATTCACAGCAAAAGCCATAGCTACAGAATGTGGAATTCTAGATCCTGACTCTAATGTAAGCCATGAAGAAGTTATAGAAGGCTCTGAATTTCGTAACTATACACATGAAGAGAGAATGCAAAAGGTTGACAAGATTCTTGTGATGGCCAGATCATCACCTCTTGACAAGCTTTTGATGGTTAGGTGCTTGAAACAGAAAGGTCATGTGGTTGCAGTCACAGGAGATGGCACTAATGATGCACCAGCACTAAAAGAAGCAGATATAGGACTTTCTATGGGTGTTGAGGGCACAGAGGTGGCTAAGGAGAGCTCAGACATTGTCATCCTGGATGATAACTTCGCTTCTGTCGCCACTGTTCTAAAGTGGGGGCGGTGTGTTTATAACAATATTCAGAAGTTTATCCAGTTTCAGTTGACCGTGAACGTAGCAGCTCTTGTAATCAACTTTATAGCAGCAGTTTCTGCTGGTGAGGTTCCTTTAACAACTGTCCAGCTACTGTGGGTAAATCTAATTATGGACACATTGGGAGCTCTGGCCCTTGCTACTGAGCGGCCCACTAATGAGTTAATGCATCATCCCCCAGTGGGTAGGACGGAGCCCCTTATTACGAATATTATGTGGAGAAACCTTTTAGCTCAAGCTTTCTATCAGATAGCAATCCTCTTGATATTCGAATTTAAAGGTGAATCTCTCCTCAGTGTGAGAAATGAGGTAAAAAATACAGTTATTTTCAATACTTTTGTTCTCTGCCAAGTTTTTAATGAATTTAACTCGAGAAGATTGGAGAAGAAGAACATCTTTGAAGGTATTTCAAAGAATCATTTATTTCTGGGAATTGTGGGAATAACTATTCTTCTCCAAGTTGTGATGGTAGAATTCCTAGAAAAGTTTGCTAAGACGGTGAAGCTAAATAGTTTGCAGTGGGGAGTTTGTATTGCTACTGCAGCATTGACATGGCCGATTGGATTGCTAGTGAAGTTTGTTCCTGTTTCTGAAAAGCCATTCCTTAGCTTACTCAGGAAAAGATTATGGCAACCCGTATTGTGA 3285 41.34 MNGTFFFKNTSARKRWRLAFAAIYCLRVILSIAKDSISKRNDNGVSKSCSYTIRDFEPSLTFTYGTVSGIQKPEILSYSQAQRRWRIVYVTISFVQVMVSHSRKIKSEEDNYYSSETLEENLPIILEVDPPSSSNPREIKITETAIDGAKLAEVVRDKNLKALHELGEVKGLASALKTNLEKGINGDDAELRSRREMFGSNTYHKPPPKGFIYFVLETFKDITILILLVCAVVSLGFGIKEHGVKEGWYEGGSIAVAVLLVVVVSASSNFRQENQFDKLSKISNNIRVEVLRDSRRQQISIFDVVVGDIAFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEINSTLDPFLLSGSKVVDGYGRMLVSSVGMKTAWGEMMSSITHENAEQTPLQVRLNTLTSSIGKVGLSVALLVLLVLLVRYFNGNTTDENGNKEYNGTRTEINDVFDAIIRIIATAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNKMKVTKFWLGQSFQQDDSSEIIAQNIYELIYQAVSFNTTGSVYKPLPGSIPEISGSPTEKAILSWAILELGMDMEKVKKSHTILYVETFNSDKKRSGVAIKKESDRTIHVHWKGAAEVVLAMCSDYYESDGTIKPLDEEKRSIIEQIIQGMAASSLRCIAFAHRQISEEEICCNEDDGTRRRLKEDDFTLLGIIGMKDPCRPGVKSAVQSCKSARVSIKMITGDNIFTAKAIATECGILDPDSNVSHEEVIEGSEFRNYTHEERMQKVDKILVMARSSPLDKLLMVRCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGVEGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTTVQLLWVNLIMDTLGALALATERPTNELMHHPPVGRTEPLITNIMWRNLLAQAFYQIAILLIFEFKGESLLSVRNEVKNTVIFNTFVLCQVFNEFNSRRLEKKNIFEGISKNHLFLGIVGITILLQVVMVEFLEKFAKTVKLNSLQWGVCIATAALTWPIGLLVKFVPVSEKPFLSLLRKRLWQPVL 1094
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24479555 24482839 - BLOR17006 Blo06g00423 61716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00423 1094 PANTHER CALCIUM-TRANSPORTING ATPASE 78 1063 - -
Blo06g00423 1094 PANTHER CALCIUM-TRANSPORTING ATPASE 12 62 - -
Blo06g00423 1094 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 516 724 IPR023299 GO:0000166
Blo06g00423 1094 PANTHER CATION TRANSPORTING ATPASE 78 1063 - -
Blo06g00423 1094 PANTHER CATION TRANSPORTING ATPASE 12 62 - -
Blo06g00423 1094 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1076 IPR023298 -
Blo06g00423 1094 Gene3D - 188 386 - -
Blo06g00423 1094 Pfam E1-E2 ATPase 287 488 - -
Blo06g00423 1094 ProSitePatterns E1-E2 ATPases phosphorylation site. 512 518 IPR018303 -
Blo06g00423 1094 SUPERFAMILY Calcium ATPase, transduction domain A 285 384 IPR008250 -
Blo06g00423 1094 SMART Cation_ATPase_N_a_2 162 239 IPR004014 -
Blo06g00423 1094 Gene3D - 217 1073 - -
Blo06g00423 1094 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 149 1076 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Blo06g00423 1094 Pfam Cation transporter/ATPase, N-terminus 167 234 IPR004014 -
Blo06g00423 1094 SFLD p-type atpase 492 872 IPR044492 -
Blo06g00423 1094 PRINTS P-type cation-transporting ATPase superfamily signature 712 723 - -
Blo06g00423 1094 PRINTS P-type cation-transporting ATPase superfamily signature 333 347 - -
Blo06g00423 1094 PRINTS P-type cation-transporting ATPase superfamily signature 510 524 - -
Blo06g00423 1094 PRINTS P-type cation-transporting ATPase superfamily signature 819 838 - -
Blo06g00423 1094 PRINTS P-type cation-transporting ATPase superfamily signature 734 744 - -
Blo06g00423 1094 PRINTS P-type cation-transporting ATPase superfamily signature 843 855 - -
Blo06g00423 1094 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 792 899 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo06g00423 1094 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 452 558 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo06g00423 1094 Pfam haloacid dehalogenase-like hydrolase 508 833 - -
Blo06g00423 1094 PRINTS Sodium/potassium-transporting ATPase signature 252 272 - -
Blo06g00423 1094 PRINTS Sodium/potassium-transporting ATPase signature 630 648 - -
Blo06g00423 1094 PRINTS Sodium/potassium-transporting ATPase signature 503 524 - -
Blo06g00423 1094 Pfam Cation transporting ATPase, C-terminus 904 1074 IPR006068 -
Blo06g00423 1094 SFLD Haloacid Dehalogenase 492 872 - -
Blo06g00423 1094 Gene3D - 520 719 IPR023299 GO:0000166
Blo06g00423 1094 SUPERFAMILY HAD-like 508 924 IPR036412 -
Blo06g00423 1094 CDD P-type_ATPase_Ca_PMCA-like 194 952 - -
Blo06g00423 1094 Gene3D - 507 864 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00423 Blo-Chr6:24479555 Blo12g00345 Blo-Chr12:19397056 0 dispersed
Blo16g00832 Blo-Chr16:34782847 Blo06g00423 Blo-Chr6:24479555 1.70E-73 dispersed
Blo06g00423 Blo-Chr6:24479555 Blo12g00987 Blo-Chr12:27907713 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00423 K01537 - tcc:18613267 1420.6