Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00502 ATGCCCAGCTTCAGACCCATTTTAGCTGTTCTCGTAGTAGTTCTCTTCTTCTCAACCAACTATGGAGCAGAAGAAGAATCTGCTTCTCTTTCTAGAGTTTTATGCGAAGGCACTCTCTATACAGATCTATGCTCCACAACTCTCGCCTCCTTCCAAGACCTCTCTTCCAAATCTCTGCAACAGATAGTCCTCGAATCAGTCAACTACACCACCTCCGAAGTTCGAGCAGCTTTCTCAAACTGCTCCACCATTAACAAAAGACGGAAGGCCCTCGACCCAGTTGAAAAGGCTGCCATTTACGACTGTCTGGAGCTTCTGGATATCACCATTGACGACCTTTACTCCGTTCTCTCCAAACTCTCACCGGGAAAACCAGCTTCCAGCTACTTCGATCAGATGCAGACTTTTCTCAGCGCTGCGATGACGAACCAGTACACTTGCTTAGATGGGTTTTCTCACAGTCGAGGAAGGGTGAGAGAAGGGATAAAGAAGTTACTGCATAAAGTCATCCACCATGTGAGTAATAATCTTGTTTTGCTGAAGAAAATTCCGAGAGCTGGGGAACGGAAAGTGAAGGGCGAGATATTTCCTGAGTATGGAAAGATGAAAGATGGGTTTCCATCCTGGATTTCGGCGAAAGATAGGAAATTGTTACAGTCGTCGATGAACGAAACCACGTATGATTTGGTCGTTGCTAAAGACGGAAGTGGAAACTTTACCACCATTGGAGAGGCAGTGGATGCAGCTCCAAATTCGAGTTCTACCAGGTTTGTGATATATATAAAGGCCGGAGCATACTTTGAGAATGTGGAGGTAGGGAAGAATAAGGTGAATTTGACGTTCATTGGAGATGGAATTGGAAAGACTGTTATCAAAGCCAGCCGGAGTGTGGTTGATAACTCCACTACTTTCCGGTCGGCCACCGTCGCCGCGGTGGGAGCTGGATTTATAGCGAAAGGTATAACGATCGAGAATTCCGCCGGAGCAATCAAGCACCAAGCAGTGGCCTTCAGGAGCGGTGCCGACCTCTCCGCCTTTTACCAATGCAGCTTCGTTGCCTACCAAGACACCCTCTACGCTCACTCTCTCCGCCAGTTCTACCGGAACTGCGACATCTACGGCACCATCGACTTCATCTTCGGCAACGCGGCGGTTGTCTTCCAAAACTGCAGCCTCTACGCACGGAAACCCCTTGAAAACCAGCAGAATATCTTCACCGCGCAAGGCAGACTAGATCCGAACCAGAACACGGGGATTTCAATCATCAATTGCAAGGTCGCTGCTGCGGCTGATCTAATTCCGGTGCAATCGAATTTCAAAACGTATCTTGGTCGGCCGTGGAAGGAGTACTCCAGAACTGTTTACCTGCAATCTAACCTGGGCGATTTGATCGATCCGAGCGGCTGGTTGGAGTGGAACGGAACGTTCGCGCTGGACACCCTCTTCTACGGCGAGTATAAGAATCGTGGACCGGGTTCGAACACAACGGCAAGAGTGAACTGGCCTGGGTATAAGGTCATCACCAACACAACAGAGGCTATGGAGTTTACAGTTGCAGAGTTTATCCAAGGGACGGAGTGGCTTAACTCCACCGACATTACTTACTTTCCATATTTGAGTTGA 1623 48.61 MPSFRPILAVLVVVLFFSTNYGAEEESASLSRVLCEGTLYTDLCSTTLASFQDLSSKSLQQIVLESVNYTTSEVRAAFSNCSTINKRRKALDPVEKAAIYDCLELLDITIDDLYSVLSKLSPGKPASSYFDQMQTFLSAAMTNQYTCLDGFSHSRGRVREGIKKLLHKVIHHVSNNLVLLKKIPRAGERKVKGEIFPEYGKMKDGFPSWISAKDRKLLQSSMNETTYDLVVAKDGSGNFTTIGEAVDAAPNSSSTRFVIYIKAGAYFENVEVGKNKVNLTFIGDGIGKTVIKASRSVVDNSTTFRSATVAAVGAGFIAKGITIENSAGAIKHQAVAFRSGADLSAFYQCSFVAYQDTLYAHSLRQFYRNCDIYGTIDFIFGNAAVVFQNCSLYARKPLENQQNIFTAQGRLDPNQNTGISIINCKVAAAADLIPVQSNFKTYLGRPWKEYSRTVYLQSNLGDLIDPSGWLEWNGTFALDTLFYGEYKNRGPGSNTTARVNWPGYKVITNTTEAMEFTVAEFIQGTEWLNSTDITYFPYLS 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26918789 26924179 + BLOR17085 Blo06g00502 61795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00502 540 ProSitePatterns Pectinesterase signature 2. 372 381 IPR033131 -
Blo06g00502 540 PANTHER PECTINESTERASE 30 535 - -
Blo06g00502 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 185 IPR035513 -
Blo06g00502 540 PANTHER PECTINESTERASE 30 535 - -
Blo06g00502 540 SUPERFAMILY Pectin lyase-like 227 536 IPR011050 -
Blo06g00502 540 SMART PMEI_2 26 179 IPR006501 GO:0004857
Blo06g00502 540 Pfam Plant invertase/pectin methylesterase inhibitor 34 177 IPR006501 GO:0004857
Blo06g00502 540 Gene3D - 222 538 IPR012334 -
Blo06g00502 540 Pfam Pectinesterase 228 524 IPR000070 GO:0030599|GO:0042545
Blo06g00502 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 183 IPR035513 -
Blo06g00502 540 CDD PMEI-like_3 34 185 - -
Blo06g00502 540 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 182 IPR006501 GO:0004857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00293 Blo06g00502 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00588 Blo-Chr1:6461976 Blo06g00502 Blo-Chr6:26918789 1.60E-136 dispersed
Blo06g00502 Blo-Chr6:26918789 Blo16g00613 Blo-Chr16:24726464 1.28E-164 dispersed
Blo08g00382 Blo-Chr8:6423579 Blo06g00502 Blo-Chr6:26918789 2.96E-40 transposed
Blo05g00293 Blo-Chr5:3296310 Blo06g00502 Blo-Chr6:26918789 1.24E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00502 K01051 - jre:108994228 737.258