Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00514 ATGGATTCTGCGCGGAATTGGTTTCAAAAACTTCAACCACGAGATAAGTTAAGGACCTTATCAAAGAAAAGGGATCCCGATGGTGGAGTTGACGAAGAGTCAAATGTGTCAGCTGATGAGGAAGCTCTATCTAATACTACAAAACAGAAGGTTGCAGCAGCAAAGCAGTATATTGAGAATCACTACAAGGAGCAAATGAAGAACCTTCAAGAGAGAAAAGAACGACGAAATATCTTGGAAAAGAAGTTGGCAGATGCTGATGTTTCCGAGGAAGATCAGAACAATCTACTCAAATTTTTGGAGAAGAAGGAAACAGAATATATGAGGCTTCAGAGGCACAAAATGGGTGCAGATGATTTTGAGTTGTTGACAATGATTGGAAAAGGCGCTTTTGGAGAGGTTCGAGTTTGTAAGGAGAAAACAACAGGTCAAGTATATGCTATGAAAAAGCTAAAGAAATCAGAGATGCTTCGAAGGGGCCAGGTTGAGCATGTGAAAGCTGAGAGAAATTTGCTTGCTGAGGTGGAGAGTAACTGCATTGTCAAACTGTACTGTTCTTTTCAAGATGACGACTATCTTTATCTTATCATGGAATATCTACCTGGTGGAGATATGATGACTTTACTTATGAGGAAAGACACTTTGACAGAGGATGAAGCCAGATTTTACGTTGCAGAAACAGTTTTAGCTATTGAATCTATCCATAAACGCAATTACATTCATAGAGATATCAAGCCTGACAACTTGCTGCTTGATCGATATGGACACTTGAGACTGTCAGATTTTGGATTGTGTAAACCCTTAGACTGCAGCACACTCCAAGAACAAGATTTTTCAGTTGGTAACAATTCTAAAGGGTCTGGACCGAATGATGAAGGCTCTGTGGGTCCTAAGCGCACACAACAAGAGCAACTACAACATTGGCAAAAGAATCGAAGAACGCTTGCTTATTCTACTGTTGGCACACCAGATTATATAGCTCCTGAGGTTCTGTTGAAGAAAGGCTATGGATTGGAATGCGATTGGTGGTCACTTGGTGCTATAATGTACGAGATGCTTGTTGGCTATCCACCTTTTTATTCGGATGATCCAATGTCAACATGTAGGAAGATAGTTAACTGGAGGACTCATTTGAAGTTTCCTGAAGAAGCAAAGTTATCTCCAGAAGCAAAAGATCTTATTAGTAAGCTCTTGTGTAATGTTGGCCAGAGGCTAGGGTCAAAAGGTGCATATGAAATTAAGGCTCATACATGGTTTGAAGGTACCGAATGGGATAAGCTCTATCAAATGGAAGCTGCATTTATTCCTGAGGTAAATGATGAGCTGGATACCCAAAATTTTGAAAAGTTTGAAGAGCTTGACAACCAGAATCAGTCGTCATCCAAAACTGGTCCTTGGAGAAAGATGCTCTCATCTAAGGATATCAACTTTGTTGGCTACACATACAAGAACTTTGAGATTGTAAATGATTATCAAATGCCTGGGATGAATGGTGAGTCGGAAACACCAGAGACGGCGGACAAATTGGAGGAACCAGCAAATAATCATTGTGTTCACGGGAGTTTTTTGAACCTATTGCCTCCTGAACTAGAAGTATCTGAAAAGCAAAACAAGCCTTCCTAA 1623 40.3 MDSARNWFQKLQPRDKLRTLSKKRDPDGGVDEESNVSADEEALSNTTKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCKEKTTGQVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVESNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKRNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTLQEQDFSVGNNSKGSGPNDEGSVGPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVGQRLGSKGAYEIKAHTWFEGTEWDKLYQMEAAFIPEVNDELDTQNFEKFEELDNQNQSSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQMPGMNGESETPETADKLEEPANNHCVHGSFLNLLPPELEVSEKQNKPS 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27285544 27293004 + BLOR17097 Blo06g00514 61807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00514 540 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 23 496 - -
Blo06g00514 540 MobiDBLite consensus disorder prediction 1 47 - -
Blo06g00514 540 CDD STKc_NDR_like 118 483 - -
Blo06g00514 540 MobiDBLite consensus disorder prediction 9 31 - -
Blo06g00514 540 MobiDBLite consensus disorder prediction 279 303 - -
Blo06g00514 540 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Blo06g00514 540 Coils Coil 62 82 - -
Blo06g00514 540 ProSiteProfiles Protein kinase domain profile. 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00514 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 496 - -
Blo06g00514 540 SUPERFAMILY Protein kinase-like (PK-like) 93 471 IPR011009 -
Blo06g00514 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Blo06g00514 540 Gene3D Phosphorylase Kinase; domain 1 110 205 - -
Blo06g00514 540 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Blo06g00514 540 Pfam Protein kinase domain 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00514 540 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Blo06g00514 540 SMART serkin_6 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00514 540 Gene3D Transferase(Phosphotransferase) domain 1 206 436 - -
Blo06g00514 540 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00514 Blo-Chr6:27285544 Blo06g01092 Blo-Chr6:34219324 7.78E-78 dispersed
Blo13g00123 Blo-Chr13:3208198 Blo06g00514 Blo-Chr6:27285544 4.37E-45 dispersed
Blo01g00090 Blo-Chr1:1250067 Blo06g00514 Blo-Chr6:27285544 0 transposed
Blo01g01457 Blo-Chr1:53680900 Blo06g00514 Blo-Chr6:27285544 0 transposed
Blo08g00352 Blo-Chr8:5513656 Blo06g00514 Blo-Chr6:27285544 0 transposed
Blo14g00435 Blo-Chr14:5008763 Blo06g00514 Blo-Chr6:27285544 1.66E-06 transposed
Blo17g00858 Blo-Chr17:27963264 Blo06g00514 Blo-Chr6:27285544 0 transposed
Blo05g00281 Blo-Chr5:3073391 Blo06g00514 Blo-Chr6:27285544 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84330 PF00069 Pkinase 7.60E-64 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00514 K08790 - jre:108982626 945.266