Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00556 ATGGATGATAGTTGTGCGGTGTGTGCTGAAGTTCTGGAGTGGGTAGCCTATGGACCTTGTGGGCATAGGGATGTTTGCTCTACGTGTGTCACTCGTCTTCGCTTCATCTGTGAAGATCGACGCTGCTGTATTTGTAAGTCGGAATCGGACATAGTTTTTGTCACCAAGGCTTTAGGAGATTATACAAGCACAATTAGTGACTTTTCAGTCCTACCGTCCCAACGAAGGGAAGGTCACGTGGGATCATATTGGTTCCATGAAGACACACAAGCATTTTTTGATGATGTGGACCATTACAAGATGATTAAGGCAATGTGTAGGCTGTCGTGCAGTGTTTGTGATAAGAGGGAGGAGCAACCAAATGATGGCCCAAAGCGTCAAGTGAGGTTCAGGAATGTTGAACACCTAAAGGGTCATTTGTTCCACCGACATAAGCTACTTATGTGCAGTCTATGTTTGGAAGGAAGAAAGGTTTTTATTTGTGAACAAAAGCTATATACTAGACCTCAACTGACTCAACATATTAGCTCTGGTGACTCGGAGGTGGATGGAAGCGAGAGGGAGAGAGGTGGCTTTGCAGGACATCCTACGTGTGAATTTTGCCAAACTCCATTTTATGGGGATAATGAACTGTACTTGCACATGTCAACCGATCACTTTACTTGTCATATATGCCAAAGACTCCATCCTGGTCAATATGAGTATTACCGAAATTATGATGACCTAGAGGCAACTATGTTTTCGACATGGCAGATTCATTTCCGTCATGACCATTTCCTGTGTGAAGATGATGCCTGCCTTGATAAGAAGTTTGTTGTCTTCCAGTCTGAAGTTGAAATGAAGAGGCATAACACTATTGAACATGGGGGCCGATTATCTCGTTCTAAGCGTAATGCTGCTCTCCAGATTCCTACTAGCTTCCGTTATAGACGAGGCAATGAACAAGATCATCGTCGAGGAGGTAGGACGTTTCGTCGTGATCCTTCTGACAACCAACTTTCCATTGCCATTCAAGCAAGTTTGGAGACAGCTAATTCAGAAGGATCAATCCATGATCCATCAGCATCATCACTAGGTGGACAAATAGACTCTGAGAGCCATATTGATCCTTTAATCCAACCAATTGAATTGTTAGACGTTGATCCTGATTCAGCCTTTCGCTATCTTCAAGCATTAGGACATGCTAGGAACGCAACGTTGGTAGAAGCATCCTTTCCACCTCTTTCTGTGGCGCCCAGCAGCAGTCATGCAAATACCAAACAAGATTCTGATACTTTGCCTAGTAATACTATGGCAGCGCGGCTTCGACAGCAAAGGAAAGTAAATGTTGTAAATTCAGCTCAAGGTTGGCCAGCAACAAGACGTGGACCTTCTTTTCCATCTAACAAGTCAGCTGAAGGTTGGCCAGCAATTAATGGTACACATACAGCATCACACAGTTCAGGGGTGTCTAAAGTTGGTATTAGTAGTAGACCTTCACCATCAAGTTCTGCAGTAGCTCAGGTACAAGCTGGACCAAGGATGGTTCGTGGGCTACCTGCTAGTGGTTCTTCAGGAGAATCAAGCAGCAGTAGCAGAATAACCCAGTCTGCTTCAGCTCCCTGTCTCTCTGAAAAAGAATGTGTTGATCGTTCTGACATTGATTTCCCTCCTGTTACTTCAGCACAAACACGAAAGGCGCCTCCTATGAACCAGAATTTACTGAATGTGGAAGATGTTCAAACAGCCAATAAGTCCTTGGTTGAAAAGATACGCACTGCTCTCGAAAATGACCCAGACAGATATAGTATTTTTAAAGATATATCTGGACAGTATCGCCAGGGTTTAATTGATACAGAAATATATCTGGATTTTGTGCAGCAGTTTGGCTTGTCACATCTTGTAATCGAATTAGCTAGACTTTGCCCTGATGTACACAAGCAAAAAGAACTTTTAGAGATGTACAGTTTAAGATCGCTAAGTGTTGGATCAAGAGAAAACGGTTATTATCTGGAAGGCAATCACTCGAAAGAAAAGAAAGGTGCCAAGAAAGGTAAAGGAAAGGCAATAGATGCTGCAGATAAAGGAAAAGCCATAGGTCCAAAGGACACCTTGGCGGATAGTGTGATTAGCTCTTTGAGGAAACTGCAGGCTGACTTCAAGCCTTCTGACATTGAGGGAGAGGTATTATCAAAGGATGGTTATCGGGCTGCAACGAGAGGAAAATCAAAGGTCACATCTGATGAGCCAAAACTGGTGTTGAGAAATCAAGATGAATTTCCACCAGCTGTCAGTGAAGTAAAACCAAATACTGGGGATGCGGTTGGTGGCAGCAAACAGCGGAAAAAAACGTCAAAGTTCCACAGAGTTCGCCTAGGTGATGGCTCTTTCTCTACCCTCCTGGATTCCAAAAATTCAGATCAAGAAACTGGGAATTCAGATAGCAAAGAGAAATTTGAAGGGGCATTGCCTGCACGTGGGGTTTGGCGAAATGGCGGTGGCCAGAAGCTATTTCCTTAA 2499 43.7 MDDSCAVCAEVLEWVAYGPCGHRDVCSTCVTRLRFICEDRRCCICKSESDIVFVTKALGDYTSTISDFSVLPSQRREGHVGSYWFHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKREEQPNDGPKRQVRFRNVEHLKGHLFHRHKLLMCSLCLEGRKVFICEQKLYTRPQLTQHISSGDSEVDGSERERGGFAGHPTCEFCQTPFYGDNELYLHMSTDHFTCHICQRLHPGQYEYYRNYDDLEATMFSTWQIHFRHDHFLCEDDACLDKKFVVFQSEVEMKRHNTIEHGGRLSRSKRNAALQIPTSFRYRRGNEQDHRRGGRTFRRDPSDNQLSIAIQASLETANSEGSIHDPSASSLGGQIDSESHIDPLIQPIELLDVDPDSAFRYLQALGHARNATLVEASFPPLSVAPSSSHANTKQDSDTLPSNTMAARLRQQRKVNVVNSAQGWPATRRGPSFPSNKSAEGWPAINGTHTASHSSGVSKVGISSRPSPSSSAVAQVQAGPRMVRGLPASGSSGESSSSSRITQSASAPCLSEKECVDRSDIDFPPVTSAQTRKAPPMNQNLLNVEDVQTANKSLVEKIRTALENDPDRYSIFKDISGQYRQGLIDTEIYLDFVQQFGLSHLVIELARLCPDVHKQKELLEMYSLRSLSVGSRENGYYLEGNHSKEKKGAKKGKGKAIDAADKGKAIGPKDTLADSVISSLRKLQADFKPSDIEGEVLSKDGYRAATRGKSKVTSDEPKLVLRNQDEFPPAVSEVKPNTGDAVGGSKQRKKTSKFHRVRLGDGSFSTLLDSKNSDQETGNSDSKEKFEGALPARGVWRNGGGQKLFP 832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28052114 28055662 + BLOR17139 Blo06g00556 61849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00556 832 MobiDBLite consensus disorder prediction 448 502 - -
Blo06g00556 832 CDD RING-HC_ZNF598 5 46 IPR041888 -
Blo06g00556 832 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Blo06g00556 832 MobiDBLite consensus disorder prediction 448 535 - -
Blo06g00556 832 MobiDBLite consensus disorder prediction 729 748 - -
Blo06g00556 832 PANTHER EBR1 1 830 - -
Blo06g00556 832 MobiDBLite consensus disorder prediction 729 832 - -
Blo06g00556 832 MobiDBLite consensus disorder prediction 515 535 - -
Blo06g00556 832 MobiDBLite consensus disorder prediction 664 684 - -
Blo06g00556 832 SMART c2h2final6 259 288 IPR013087 -
Blo06g00556 832 SMART c2h2final6 196 219 IPR013087 -
Blo06g00556 832 SMART c2h2final6 108 144 IPR013087 -
Blo06g00556 832 MobiDBLite consensus disorder prediction 343 364 - -
Blo06g00556 832 MobiDBLite consensus disorder prediction 343 363 - -
Blo06g00556 832 PANTHER ZINC FINGER PROTEIN 598 1 830 IPR044288 GO:0061630|GO:0072344
Blo06g00556 832 MobiDBLite consensus disorder prediction 802 816 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00556 K22381 - csv:101214376 991.49