Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00558 ATGGGCTGCTTCTGTTGCAGTGGAGAAGAAGATGTTCACTACGCTCCTGATAGTGGAGGGGTACATGCAATGAAAATGCAACCAGGGCATGATGGTGGTAACAGACACCCTGAAGCTGTGCCTAAGGCCCCTCCAATAGTAAAACCTCTGCCTATTGAAGTTCCTGCCATACGAGCAGATGAACTGAAAGAAGTTACAAATAACTTTGGAACAGATTGTTTGATTGGAGAAGGGTCATTTGGGAGAGTTTACCATGGTGTTCTGAAAAATGGTGAACAAGCAGCAATTAAAAAGCTAGATGCCAGTAAACAACCCAATGATGAATTCTTATCTCAGGTTTCCTTGGTTTCAAGGCTGAAGCATGGAAATTTTGTTCAATTGCTAGGCTACAGTGTGGATGGAAATTCCCGTGTTCTTGCTTATGAGTTTGCATCTAATGGATCTCTTCATGACATTTTACATGGTAGGAAAGGAGTGAAAGGGGCACAACCTGGTCCTGTTCTGACCTGGGCACAACGAGTTAAAATTGCTGTGGGAGCTGCTAAAGGGCTTGAATATTTGCATGAAAAAGCTGATCCTCATGTCATTCATCGCGATATCAAATCTAGCAATGTGCTAATCTTTGATGACTATGTTGCTAAAATTGCTGACTTTGATCTATCTAATCAAGCTCCGGATATGGCAGCTCGCCTTCATTCTACCCGTGTTCTTGGGACCTTTGGTTATCACGCTCCCGAATACGCAATGACTGGACAGTTGAATGCCAAGAGTGATGTATACAGCTTTGGTGTTGTTTTGCTTGAACTTCTGACTGGAAGAAAGCCTGTTAACCCTACATTACCGCGCGGGCAGCAAAGTCTCGTGACCTGGGCTACTCCAAAACTTAGTGAAGACAAAGTCAGGCAGTGTGTTGACGCAAGATTAGGAGGAGATTACCCTCCTAAGGCTGTTGCAAAGATGTGGGGGAGAGGGATTGAGTTGTTCTTGGGGAAATTGGCTGCAGTTGCGGCCTTATGCGTGCAATACGAAGCAGATTTCCGACCCAACATGTCCATTGTGGTCAAGGCCCTTCAGCCGCTGTTAGTTGTACGAAGTGGTGGTCCTGCTGGGGATGCACCTGGCCTGTGA 1128 45.66 MGCFCCSGEEDVHYAPDSGGVHAMKMQPGHDGGNRHPEAVPKAPPIVKPLPIEVPAIRADELKEVTNNFGTDCLIGEGSFGRVYHGVLKNGEQAAIKKLDASKQPNDEFLSQVSLVSRLKHGNFVQLLGYSVDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAAKGLEYLHEKADPHVIHRDIKSSNVLIFDDYVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVNPTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPKAVAKMWGRGIELFLGKLAAVAALCVQYEADFRPNMSIVVKALQPLLVVRSGGPAGDAPGL 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28073192 28075848 + BLOR17141 Blo06g00558 61851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00558 375 Pfam Protein tyrosine and serine/threonine kinase 74 277 IPR001245 GO:0004672|GO:0006468
Blo06g00558 375 ProSiteProfiles Protein kinase domain profile. 69 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00558 375 Gene3D Transferase(Phosphotransferase) domain 1 144 364 - -
Blo06g00558 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Blo06g00558 375 SUPERFAMILY Protein kinase-like (PK-like) 49 357 IPR011009 -
Blo06g00558 375 SMART serkin_6 69 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo06g00558 375 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Blo06g00558 375 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 371 - -
Blo06g00558 375 Gene3D Phosphorylase Kinase; domain 1 46 143 - -
Blo06g00558 375 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 371 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00237 Blo06g00558 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00458 Blo-Chr2:6465576 Blo06g00558 Blo-Chr6:28073192 4.08E-143 dispersed
Blo06g00558 Blo-Chr6:28073192 Blo12g00146 Blo-Chr12:10172077 3.21E-161 dispersed
Blo05g00237 Blo-Chr5:2615344 Blo06g00558 Blo-Chr6:28073192 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84332 PF07714 PK_Tyr_Ser-Thr 2.40E-41 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00558 K13436 - zju:107426175 593.578