Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00594 ATGCACATGGAGTTGGAGATAGACTTCGGCGACAACCAGTATCAAAATTTGCCCATTGACAATACATGTAAGAGCTCTGAAACTAAGTCTCAAGTTGAGGAGTCGTTCGTAGCAAATGACGTTTCTGAGGTAGAAAATGATTCTGAAACTAAAGAAAAAAGCTTAGAAATGGATCCAAGTATACTCTTCAGAGCACCAACCCGTGATGCTAAGGTAGCCTATGCTGGAATGCTATCTACATTCGTTCTTGCCTTCTCAATTACTCCATTTCTCCATTATTCAAAGGTGAAAGAAATGAGCTTCATCCTCTCCCTATCCACTGGCCTCTGCGGCACTGCATCGCCAGTGCTTACTCGATTGATAACCAATCTTAAAATAGGCAAATCAGACATCGGACGACTTGTTATTTCTGCAGGAATGTATTCTGATTTTATGTCTACTCTTTTAATCTGCGTTGGCTATCTTTTTTGTAGATGCCAAGAGGTACCTATCAGTATTAAAAATGGATTAGAGATAAGTGGAATGATTTTGGTCCAGACAGTAATTGCCGCCAAGATTTCGCCAATTTTTATGAACTGGGTCAACAATGAAAATCCAGAAGGAAAGCCAATGAAAGGATCACACCTGGTGCTCTCAGTTGCTTTCATGGCTTTTATTTGCAGTTGCCCAGTTTTGTTTGGTTATAATACTATTCTAAGCGCATTTATTGCTGGAACATTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGTGGTTGGGAAAATCAATTATCTGTTGAACACCATTTTTTATCCTATTTTTTTCTTTTGGATGGGAGTTGAATGCAAGTTAAGTGATTTTCAGCCTGGCCACATATGGACATGGATCCGGTTGTTTCTTCTATTTGCAATTGTGACAGCTGGGAAGGTTGTTGGAACCGTTATCTCTGGTGTGATTTTGGGATTCCACTGGCCTGAATCTGTCGCACTAGGATTGCTTTTGACTGTAAAGGGTCATTTTCACATATACATGGCCATTGCTGCAAAAACTGCTGGTAAGACTACCACTTCAACCACCACAGCAATGATAATTGTGATCTTTTTCACTGTTGTGCATGCTCCAACAGTTGTGGCTCATATTATTGAACGGGCAAGAAAACGTGCACCGACCCACAGAATGGCACTTCAGTTGCTTGATCCATTAAATGAGCTTAGGATCTTACTGTGTCTCCACGGCCCTCAAAATGTCCCCTCTACCATTAATTTCATGGAGATTTCTAAAGGAACAGCCGACCCAGGAATTGTGGTTTATTTGACAGATATGGTAGAACTTACAGATGAAATAGCCGCTACTTTAGTTCAAGGTGAAGGTGTGGACACTGTGACTGTGACAGACAAGGGAGTGACTGAAGCAAGAGATCAAGTCACTAGAGCTGTTCAGTCATATGTAGGGGAAAATGGTGAGGGAATCACTCTCAGGCGAATGCTAGCTCTCTCAACGTTCAATGGCATGTCTCAGGACATCTGCATTTTGGCAGAGGATTTAATGGTCGCCCTTATTATACTGCCATTTCACAAAAGCCAAAAAGCAGATGGGAAGCTCGATGGTGGCCACACCGGTTTTCGTTATGTCAATCGTAAGGTTCTGAGGAACGCTCCATGCTCAGTTGGGATCCTCGTGGATAGAGGTCTTGGAGTGGTCGAGAAGATAGCAAGATCATATGTATCGCTCAATGTAGCAGTAATCTTCATAGGGGGGAAGGATGATAGAGAAGCATTGGCCTATGCAGGCCGAGTAGCAAGACATCCAGGAGTAAAGCTCACCGTAATAAGATTTTTGGTAGATACTAACTCAGACAATCCTGCCAGAAGAGCCAACACTTACAGAGTCGATGCTGCTGAGCAAGAAGAAGAAATGAGACAAGATGATGAATGTTTTGCTCAGTTTTATGAACGACATGTTTCGACCGGTCATGTTTCATATGTTGAGAAACATCTTGCTAATTCTTCCGAGACGTATTCGACTTTGAGATCGTTTGAAGGATTGTATTCTCTTATTATAGTTGGTCGGGGCGGAAGGGTGAACTCGTTGTTGACGTTTGGGATGAGCGATTGGCAGCAATGCCCCGAGTTGGGTCCGATAGGGGATGTTCTTTCTGGGTCTGATTTTTCGGTGAAGACCTCGGTTTTGATCATCCAACAGCACAATCTCAAAGGAGAGTTAGATGGTCTTGATGATGACTTTTCAATCATTCGCAGAATTTGCTATTGTTCGCTAGGGTTTGCCCGGTCTCTTCACGGTGCGAAGGCCAAGAATGGCTTTCTTCTGGAGGTTCTCAAGCTCGAGGAGTTTCTCAACGACCCTTGCGGGATTAAGAGTAGAGGCATTAAGGAAGCCACTGTGCAGGTTGCGGTGCCTAAGGTTTTACCACCTCCTCCGCCACTCCTGCCGGTTGGGGTTGTGGGTGAGGGGTTTGGAGGTGCCAATGGAGCTGAAGATACCGCTGCGATGCTCTCGGCGCAGACAAAGCGTGTTGCACTTCAGCGTCAGGCGGCTGCGGCCATGGTTGCAGCTGAAGACTATGCTCGGAGGTTTGAGAACGGAGATTTGGTGGATGCCTCTGGAGTTCCTGCTGGAGAAAAGCAGGGTTCATCCAGCGTGAAAGTGATGTGCCGAATATGCTTTTTTGGTGAAAATGAGGATAGTGAAAGAGCAAGGAGGATGCTTTCGTGCAAAATTTGTGCCAAGAAGTACCACCGAAGCTGCTTGAAGACTTGGTCTCAACATAGAGATATTTTTCACTGGAGTTCATGGGCCTGTCCTTCATGTCGAATGTGTGAGATATGCCGACGAACTGGGGATCCTAACAAATTCATGTTCTGCAAAAGGTGTGATGGTGCATACCATTGTTATTGTATGCATCCTCCGCACAAGAACGTTAGTTCTGGACCTTATCTGTGCCCAAAGCATACTAAGTGTCACAGTTGTGGATCCAATGTCCCAGGAAATGGCCAAAGCTTGAGGTGGTTTCTGGGATATACATGTTGTGATGCATGTGGACGATTGTTTGTGAAGGGTAACTATTGTCCTGTCTGTTTGAAGGTCTATAGAGATTCAGAATCAACGCCAATGGTGTGCTGTGATGTTTGCCAGCGCTGGGTTCACTGCCAGTGTGATGGCATCAGCGATGAGAAATACCAACAGTTTCAAGCAGATGGAAACCTTCAGTACAAGTGTGCTGCATGTCGTGGGGAGTGTTACCAGGTTAAGGATCTGGAGGATGCTGTTCAAGAGCTGTGGAGGAGAAGAGATAAATCTGATCGTGATCTGATTGCCCGCTTGAGGGCTGCTGCAGGGTTCCCTAGCCAAGAAGAAATATTTTGTATATCACCATCTTCAGATGATGAGGAAAATGGCCCTCTGTTATTGAAGAATGAATTTGGACGCTCATTGAAATTTTCTTTCAAAGGATTAGTTGAAAAATCTCCAGAGAAGACCAAAAACTATGGAAAAGAAACTCTAAACAAGAAAAAATCTAAGAAAAAAGGATTTCTGACATCTTTTCCTACCGAAGAGGAACCAAATCCGAGTCTGGGATTACACGAGGCTGCACAACATTTGGAATATGGATTGGGAGATGAAAAGAACAATGAAAGGCAATCTCATAAAACTGAAGAATCTAACATATATTCTTCTCCTGCCGCTAGAAGTCTTGGCTACACTGAAGGAGTGTGCTCTATCATTCAGCCTGAAGTTCTAAAACACAAATTTATTGATGAAGTAATGGTCAGTGATGAAGATAGAAAGTTGAAAGTTCGAATCAAGAGTAACAAGCCACCCGGGATGGAGAGTGAGGAGGATGCAGGAAAAAAAATAGTTAAGGCGAGGGCCGTGAAAGGTAAAAAGTTAGTTATAAACCTGGGTCTGCGAAAGATCAACGTGACTAACTCTCCAAGGTCTGATGCTTCAAGCAGGCAAAGAGAACATGATTTGATGAACTCCAATGGAGACAAAGTCGGTAACTTTGAGCAATCAAAAGGGTCTAAGGTTGAGGAAGAACTGGAAAGAGATCTACTAAGCTCAGGAAAAGTTAGATCCAAAGTTGCTGACACAATTCCTAAATTTGGAAATGGGAATAGTGCTGGTGGAAACGAAACTATGCCTCCGAAGGACATTCTTGTATTTTCACGAAAAAGAAGCTCGGACGGAAGAAAGGCTGTCCTTGGATTTGTGGGCGAAGTCCCCACATTGAGAGGTGATGAAGTATCTTTAGGAAAACTATCAACGAGTAAACACCGAATAGATAGAGAAGGTGATGAAGATTATGGTCAGACAACTGTTCCGGATTCTTTGCCAAGAGACTCGAAACCTCTGCTGAAATTCAAGTTCAAGAAACCAGTTCTTCAAAATCAGAGCTCTCCTCATCTAGAAGATGAAAAAATTTGCATCAAAGGCCAGAGGTCAAAAAGAAAAAGATCATCAGCCTTTGTAGAAAAAATATCCTTAGATGAAAATGATGCGAATCGACATCTGGAAAATTTTTCGGACGAGATTATGGATGCTAACTGGATATTGAAAAAATTGGGAAGAGATGCCATTGGGAAAAGAGTTGAAGTCCATCATCCATCCGACAATTCATGGCATATAGGAGTGGTTACAAACGTAATCGACGGCACCACAGCATTATCTGTGACCTTGGACGATGGTAAGGTAAAAACATTGGAACTTGGAAAGCAAGGCGTTCGCTTTGTTCCTCACAAACAGAAGAGATTAAAATCTTAA 4761 43.21 MHMELEIDFGDNQYQNLPIDNTCKSSETKSQVEESFVANDVSEVENDSETKEKSLEMDPSILFRAPTRDAKVAYAGMLSTFVLAFSITPFLHYSKVKEMSFILSLSTGLCGTASPVLTRLITNLKIGKSDIGRLVISAGMYSDFMSTLLICVGYLFCRCQEVPISIKNGLEISGMILVQTVIAAKISPIFMNWVNNENPEGKPMKGSHLVLSVAFMAFICSCPVLFGYNTILSAFIAGTFLPREGRVSRWVVGKINYLLNTIFYPIFFFWMGVECKLSDFQPGHIWTWIRLFLLFAIVTAGKVVGTVISGVILGFHWPESVALGLLLTVKGHFHIYMAIAAKTAGKTTTSTTTAMIIVIFFTVVHAPTVVAHIIERARKRAPTHRMALQLLDPLNELRILLCLHGPQNVPSTINFMEISKGTADPGIVVYLTDMVELTDEIAATLVQGEGVDTVTVTDKGVTEARDQVTRAVQSYVGENGEGITLRRMLALSTFNGMSQDICILAEDLMVALIILPFHKSQKADGKLDGGHTGFRYVNRKVLRNAPCSVGILVDRGLGVVEKIARSYVSLNVAVIFIGGKDDREALAYAGRVARHPGVKLTVIRFLVDTNSDNPARRANTYRVDAAEQEEEMRQDDECFAQFYERHVSTGHVSYVEKHLANSSETYSTLRSFEGLYSLIIVGRGGRVNSLLTFGMSDWQQCPELGPIGDVLSGSDFSVKTSVLIIQQHNLKGELDGLDDDFSIIRRICYCSLGFARSLHGAKAKNGFLLEVLKLEEFLNDPCGIKSRGIKEATVQVAVPKVLPPPPPLLPVGVVGEGFGGANGAEDTAAMLSAQTKRVALQRQAAAAMVAAEDYARRFENGDLVDASGVPAGEKQGSSSVKVMCRICFFGENEDSERARRMLSCKICAKKYHRSCLKTWSQHRDIFHWSSWACPSCRMCEICRRTGDPNKFMFCKRCDGAYHCYCMHPPHKNVSSGPYLCPKHTKCHSCGSNVPGNGQSLRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDGISDEKYQQFQADGNLQYKCAACRGECYQVKDLEDAVQELWRRRDKSDRDLIARLRAAAGFPSQEEIFCISPSSDDEENGPLLLKNEFGRSLKFSFKGLVEKSPEKTKNYGKETLNKKKSKKKGFLTSFPTEEEPNPSLGLHEAAQHLEYGLGDEKNNERQSHKTEESNIYSSPAARSLGYTEGVCSIIQPEVLKHKFIDEVMVSDEDRKLKVRIKSNKPPGMESEEDAGKKIVKARAVKGKKLVINLGLRKINVTNSPRSDASSRQREHDLMNSNGDKVGNFEQSKGSKVEEELERDLLSSGKVRSKVADTIPKFGNGNSAGGNETMPPKDILVFSRKRSSDGRKAVLGFVGEVPTLRGDEVSLGKLSTSKHRIDREGDEDYGQTTVPDSLPRDSKPLLKFKFKKPVLQNQSSPHLEDEKICIKGQRSKRKRSSAFVEKISLDENDANRHLENFSDEIMDANWILKKLGRDAIGKRVEVHHPSDNSWHIGVVTNVIDGTTALSVTLDDGKVKTLELGKQGVRFVPHKQKRLKS 1586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28669386 28680848 + BLOR17177 Blo06g00594 61887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00594 1586 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1016 1078 IPR013083 -
Blo06g00594 1586 MobiDBLite consensus disorder prediction 1171 1190 - -
Blo06g00594 1586 Pfam Sodium/hydrogen exchanger family 54 374 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo06g00594 1586 PANTHER PHD FINGER FAMILY PROTEIN 754 1580 - -
Blo06g00594 1586 Gene3D - 441 692 - -
Blo06g00594 1586 ProSiteProfiles Zinc finger RING-type profile. 884 937 IPR001841 -
Blo06g00594 1586 SMART PHD_3 1021 1076 IPR001965 -
Blo06g00594 1586 SMART PHD_3 938 984 IPR001965 -
Blo06g00594 1586 SMART PHD_3 883 937 IPR001965 -
Blo06g00594 1586 ProSiteProfiles Zinc finger PHD-type profile. 881 939 IPR019787 -
Blo06g00594 1586 MobiDBLite consensus disorder prediction 1308 1346 - -
Blo06g00594 1586 ProSiteProfiles Zinc finger PHD-type profile. 1019 1078 IPR019787 -
Blo06g00594 1586 SUPERFAMILY FYVE/PHD zinc finger 1020 1076 IPR011011 -
Blo06g00594 1586 SUPERFAMILY FYVE/PHD zinc finger 880 937 IPR011011 -
Blo06g00594 1586 MobiDBLite consensus disorder prediction 1424 1444 - -
Blo06g00594 1586 ProSiteProfiles Zinc finger RING-CH-type profile. 876 949 IPR011016 GO:0008270
Blo06g00594 1586 PANTHER HISTONE ACETYLTRANSFERASE 270 592 - -
Blo06g00594 1586 PANTHER HISTONE ACETYLTRANSFERASE 754 1580 - -
Blo06g00594 1586 SUPERFAMILY FYVE/PHD zinc finger 928 989 IPR011011 -
Blo06g00594 1586 Gene3D - 54 383 IPR038770 -
Blo06g00594 1586 PANTHER PHD FINGER FAMILY PROTEIN 270 592 - -
Blo06g00594 1586 CDD USP_Like 571 686 - -
Blo06g00594 1586 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 876 993 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00594 Blo-Chr6:28669386 Blo05g00511 Blo-Chr5:8749897 5.64E-109 dispersed
Blo12g01117 Blo-Chr12:28819648 Blo06g00594 Blo-Chr6:28669386 5.87E-12 dispersed
Blo02g00370 Blo-Chr2:4063939 Blo06g00594 Blo-Chr6:28669386 1.06E-10 transposed
Blo05g00210 Blo-Chr5:2154335 Blo06g00594 Blo-Chr6:28669386 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00594 - - csv:101211645 1094.72