Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00601 ATGCCGACGAGTAGGTTCACGGGCTACTGTGGGAAACGACAGTTTCCCCTCTACGTATCACTGTCGAACGACCCCAGGAAGACAGTTTCGCAGCTGCCCCCCGTCTTTTTCTTTCTCCTTCTGTCTAGTATTTATGCATTTACAGCTGTAGACAGTCAGCTCTGCCGGAGTTTGTGGGGTGGATCTGTGGAAATTCATCACTTGGTTTGGATTTTGATTGGAAATTGGAGCAATCATAGTGAATTTTCGGATTTCCTTGAGCTTGAGCCAAAAACCATCAAAAGCACGGGCAGTCAGGTGTGCCAGATCTGTGGAGACAGTGTTGGGAAGACTGTGGACGGTGAAGCATTCACAGCTTGCAACATTTGCGCTTTCCCAGTATGCAGGCCATGCTATGAATATGAAAGGAAGGATGGAAATCAGTCTTGCCCACAGTGCAAAACCAAATACAAGAGGCACAAAGGTAGTCCTGCTATTCTCGGTGATGAAGCAGAGTATGCTGAAGATCATGATGGCACTAACGATATCAATTACAATTCTGAAAGCCAAAACCAGAAGCAGAAAATTGCAGAGCGTATGTTGAGTTGGCAGATGACATATGGACGGGCAGAAGATCTTGGACCTGCAAGTTACGACAAGGAGATTTCTCCCAGTCACATTCCTCGACTCACCAATGGGCAAGAGGTGGTTTACCTAACACAGGACCTTAAGACGGTTTCTGGAGAATTATCTAATGCATCCCCCGAACGGCTTTTTATGGCATCTCCTGGAGTACCTGGAGGGAAGCGAATTCATGCGCTTCCTTACACAGCTGACATAAACCAATCTTCCAATGTGCGGGTTGTGGATCCTGCAAGAGAATTTAACTCGCCAGGCTTGGGCAATGTAGCTTGGAAAGAGAGAGTTGATGGATGGAAGATGAAGCAAGAAAAGAATGTCGTCCCAATGAGTACTGGTCAAGCTGCATCTGAAAGAGGAGGTGGAGATATTGATGCCAGCACTGATGTGCTTGTGGATGATTCCTTACTGAATGACGAAGCGAGGCAGCCTCTTTCAAGAAAGGTGTCGGTTCCATCATCTAGGATAAACCCTTATAGAATGGTCATTGTTCTGCGGCTGGCTATTCTTTGTATTTTCCTGCATTACCGAATAACAAATCCTGTGCCCAATGCCTATGCTCTGTGGCTTATATCTGTTATATGTGAGATTTGGTTTGCTCTGTCTTGGATATTAGATCAGTTCCCCAAGTGGCTTCCTGTTAATCGGGAAACATATCTTGATCGGCTTGCTCTAAGATATGACAGGGAAGGAGAACCATCACAGCTAGCTGCTGTTGATATTTTTGTGAGTACCGTCGACCCATTAAAGGAGCCTCCTCTTGTGACAGCCAATACTGTGCTCTCAATTCTTGCTGTTGACTACCCAGTTGACAAGGTCTCATGCTATCTTTCTGATGATGGATCTGCTATGTTGACATTTGAAGCCTTATCTGAAACATCAGAATTTGCTAGGAAATGGGTTCCCTTTTGCAAAAAATATAGCATTGAACCTCGAGCTCCAGAATGGTACTTTGCTCAAAAAATTGACTACCTGAAGGATAAAGTCCATCCATCATTTGTGAAAGATCGTAGAGCTATGAAGAGGGAGTACGAGGAATTTAAGGTTCGTGTTAATGGTCTGGTGGCAAAGGCACAGAAGGTTCCTGAAGAAGGCTGGATTATGCAAGATGGAACTCCATGGCCTGGGAATAATGTTAGAGATCATCCTGGGATGATTCAGGTTTTCTTAGGCCAAAGTGGAGGACTAGATGCTGAAGGTAATGAACTACCACGCCTAGTGTATGTCTCTCGTGAAAAGCGTCCTGGCTTCCAGCATCATAAGAAAGCTGGTGCTATGAATGCACTTGTTCGAGTGTCAGCAGTACTTACCAATGGCCCTTTCCTGTTGAATCTTGATTGTGATCACTACATAAACAATAGCAAGGCCTTGAGAGAAGCAATGTGTTTTATGATGGATCCTAACCTTGGGAAATATGTCTGCTATGTTCAGTTTCCACAGAGGTTTGATGGTATTGACAGGAATGACCGATATGCCAACCGTAATACTGTTTTCTTTGATATTAATTTAAGAGGCTTGGACGGAATTCAAGGTCCAGTTTATGTGGGTACTGGTTGCGTCTTCAATAGAACTGCTTTATATGGTTATGAACCTCCTCTAAAGCCGAAGCATAAAAAACCTGGGTTGCTGTCTTCACTCTGCGGAGGGTCTCGAAAGAAAAACTCAAAATCAAGCAAGAAGAGCTCAGACAAAAAGAAATCTGGGAAGCATGTTGATCCTACTGTACCAATCTTTAGTCTTGAAGACATTGAAGAAGGGGTAGAAGGTGCAGGATTTGATGATGAGAAGTCGCTCCTAATGTCACAAATGAGCTTGGAGAAAAGATTTGGCCAGTCCGCTGTTTTTGTTGCCTCTACCCTCATGGAAAATGGTGGTGTTCCTCAGTCTGCGACTCCAGAAACTCTTCTTAAAGAGGCAATTCATGTTATTAGCTGCGGTTATGAGGACAAATCAGATTGGGGAACTGAGATTGGATGGATCTATGGCTCCGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCCCGTGGATGGCGTTCGATTTATTGCATGCCTAAGCGTCCGGCTTTTAAAGGTTCTGCTCCAATTAATCTTTCAGATCGTTTGAACCAAGTGCTTCGGTGGGCTCTAGGTTCAGTGGAAATTCTGCTAAGTAGACATTGCCCTATCTGGTACGGTTATGGTGGTAGGCTCAAGTGGCTTGAAAGGTTTGCATACGTCAACACTACCATTTATCCAATCACCGCCATCCCTCTTCTTATGTACTGTACATTGCCCGCTGTCTGTCTGCTGACAAACAAATTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTCATATCTCTCTTCCTTTCCATCTTTGCTACTGGTATTCTGGAGATGAGATGGAGCGGCGTGGGAATCGATGAGTGGTGGAGAAACGAACAGTTTTGGGTTATTGGTGGAGTTTCAGCCCATCTTTTTGCAGTTTTCCAAGGTTTGCTCAAAGTTCTTGCTGGAATCGACACCAACTTCACTGTTACATCCAAGGCATCTGACGAAGAGGGTGATTTTGCCGAACTCTACTTGTTCAAATGGACGACTCTTCTTATCCCGCCCACCACTCTCCTCATTGTAAACTTGGTCGGGGTTGTAGCCGGTATATCCTACGCGATCAACAGCGGATATCAATCGTGGGGTCCGCTCTTCGGGAAGCTTTTCTTTGCCTTCTGGGTGATTATTCATCTCTACCCCTTCCTCAAAGGTTTTATGGGTAGGCAGAATAGGACACCCACCATTGTCGTCGTCTGGTCGATTCTTCTCGCTTCCATTTTCTCCTTGTTATGGGTCCGAATAGATCCATTTACAACTTCAGTTACTGGTCCCGATGTCGAGCAATGTGGAATCAACTGCTGA 3522 44.69 MPTSRFTGYCGKRQFPLYVSLSNDPRKTVSQLPPVFFFLLLSSIYAFTAVDSQLCRSLWGGSVEIHHLVWILIGNWSNHSEFSDFLELEPKTIKSTGSQVCQICGDSVGKTVDGEAFTACNICAFPVCRPCYEYERKDGNQSCPQCKTKYKRHKGSPAILGDEAEYAEDHDGTNDINYNSESQNQKQKIAERMLSWQMTYGRAEDLGPASYDKEISPSHIPRLTNGQEVVYLTQDLKTVSGELSNASPERLFMASPGVPGGKRIHALPYTADINQSSNVRVVDPAREFNSPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGGGDIDASTDVLVDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLAILCIFLHYRITNPVPNAYALWLISVICEIWFALSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYLSDDGSAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRVNGLVAKAQKVPEEGWIMQDGTPWPGNNVRDHPGMIQVFLGQSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSLCGGSRKKNSKSSKKSSDKKKSGKHVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEEGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGFMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTSVTGPDVEQCGINC 1173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28735117 28742221 + BLOR17184 Blo06g00601 61894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00601 1173 MobiDBLite consensus disorder prediction 742 779 - -
Blo06g00601 1173 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 583 736 IPR029044 -
Blo06g00601 1173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 175 IPR013083 -
Blo06g00601 1173 SUPERFAMILY RING/U-box 90 171 - -
Blo06g00601 1173 CDD mRING-HC-C4C4_CesA_plant 99 149 - -
Blo06g00601 1173 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 90 1173 - -
Blo06g00601 1173 PANTHER CELLULOSE SYNTHASE 90 1173 - -
Blo06g00601 1173 Pfam Cellulose synthase 445 1166 IPR005150 GO:0016020|GO:0016760|GO:0030244
Blo06g00601 1173 SUPERFAMILY Nucleotide-diphospho-sugar transferases 459 987 IPR029044 -
Blo06g00601 1173 Pfam Zinc-binding RING-finger 91 165 IPR027934 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01381 Blo-Chr1:52071896 Blo06g00601 Blo-Chr6:28735117 0 dispersed
Blo01g01734 Blo-Chr1:57039789 Blo06g00601 Blo-Chr6:28735117 0 dispersed
Blo06g00601 Blo-Chr6:28735117 Blo12g00580 Blo-Chr12:24105551 0 dispersed
Blo06g00601 Blo-Chr6:28735117 Blo12g01081 Blo-Chr12:28512601 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00601 K10999 - pvy:116132241 2023.82