Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00605 ATGGTTGATCATGTTCAACATCCAACTGTCTTTCAGAAGGTAGCTGGCCAGTTCCACCTCCGTTCCAGTGTTTCCTCTGATTTTTATGGCTCTCATACTACTAGCTTCAGAAAACCTGCACTGTACCAGAGACATTCTAGTTATGGAAACTACTCCAATGGTGCATTGCAGCTTCCTTTGGTGCCTTCAAGTAGAAGTAGCATTGATATCTCTAATGTCTCTTCAACAGCTTCTCCTATTTTTGTTCAAGCCCCAAAAGAGGATAACAAATTCATAATTGATTTCCTTATGGGTGGAGTCTCTGCTGCTGTGTCCAAAACTGCAGCTGCCCCAATTGAGCGTGTGAAGCTTTTAATTCAAAACCAGGATGAGATGATTAAATCTGGAAGACTTTCTGAGCCTTACAAAGGAATAGGTGATTGCTTTGGTCGAACTATTAAGGAGGAAGGTTTTGGTTCATTGTGGAGGGGGAACACTGCTAACGTCATCCGTTATTTTCCCACTCAAGCCTTAAACTTTGCATTTAAGGATTACTTTAAGAGGCTTTTCAACTTCAAAAAAGACAAAGATGGTTACTGGAAATGGTTTGCTGGCAACCTGGCATCAGGTGGTGCTGCTGGTGCTTCATCCCTTCTATTTGTTTACTCTCTTGACTATGCTCGTACTCGTTTGGCCAATGATGCAAAAGCTGCAAAGAAGGGTGGAGAAAGACAGTTCAATGGCCTGGTTGATGTCTACAGGAAGACATTAAAATCTGATGGTATTGCTGGTCTTTACCGTGGATTCAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTCTGTACTTTGGAATGTACGACTCCTTGAAGCCAGTTCTTTTGACTGGATCATTGCAGGATAGCTTCTTCGCTAGCTTTGCCCTCGGTTGGCTCATCACTAATGGTGCTGGCCTTGCATCATACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTCAAGTACAGCAGCTCATTGGATGCATTTTCTCAAATTTTGAAGAATGAGGGTCCAAAGTCTCTCTTCAAGGGTGCTGGCGCAAACATCCTCCGTGCTATTGCTGGGGCTGGTGTGCTTGCAGGTTATGATAAGTTACAGCTGATAGTTTTCGGAAAGAAATATGGATCTGGTGGTGCCTAA 1176 43.2 MVDHVQHPTVFQKVAGQFHLRSSVSSDFYGSHTTSFRKPALYQRHSSYGNYSNGALQLPLVPSSRSSIDISNVSSTASPIFVQAPKEDNKFIIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYSSSLDAFSQILKNEGPKSLFKGAGANILRAIAGAGVLAGYDKLQLIVFGKKYGSGGA 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28816334 28817976 - BLOR17188 Blo06g00605 61898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00605 391 Pfam Mitochondrial carrier protein 193 289 IPR018108 -
Blo06g00605 391 Pfam Mitochondrial carrier protein 89 186 IPR018108 -
Blo06g00605 391 Pfam Mitochondrial carrier protein 295 379 IPR018108 -
Blo06g00605 391 Gene3D Mitochondrial carrier domain 92 387 IPR023395 -
Blo06g00605 391 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 391 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo06g00605 391 SUPERFAMILY Mitochondrial carrier 88 376 IPR023395 -
Blo06g00605 391 PRINTS Mitochondrial carrier protein signature 107 121 IPR002067 GO:0055085
Blo06g00605 391 PRINTS Mitochondrial carrier protein signature 209 227 IPR002067 GO:0055085
Blo06g00605 391 PRINTS Mitochondrial carrier protein signature 157 177 IPR002067 GO:0055085
Blo06g00605 391 PRINTS Mitochondrial carrier protein signature 259 277 IPR002067 GO:0055085
Blo06g00605 391 PRINTS Mitochondrial carrier protein signature 303 325 IPR002067 GO:0055085
Blo06g00605 391 PRINTS Mitochondrial carrier protein signature 94 107 IPR002067 GO:0055085
Blo06g00605 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 294 380 IPR018108 -
Blo06g00605 391 PRINTS Adenine nucleotide translocator signature 168 180 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo06g00605 391 PRINTS Adenine nucleotide translocator signature 299 315 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo06g00605 391 PRINTS Adenine nucleotide translocator signature 135 156 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo06g00605 391 PRINTS Adenine nucleotide translocator signature 194 207 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo06g00605 391 PRINTS Adenine nucleotide translocator signature 91 103 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Blo06g00605 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 89 182 IPR018108 -
Blo06g00605 391 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 391 - -
Blo06g00605 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 194 286 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00605 Blo-Chr6:28816334 Blo13g00360 Blo-Chr13:21128221 0 dispersed
Blo16g00162 Blo-Chr16:3689663 Blo06g00605 Blo-Chr6:28816334 2.48E-131 transposed
Blo10g00123 Blo-Chr10:1324276 Blo06g00605 Blo-Chr6:28816334 2.64E-179 wgd
Blo05g00204 Blo-Chr5:2078225 Blo06g00605 Blo-Chr6:28816334 0 wgd
Blo06g00605 Blo-Chr6:28816334 Blo07g00643 Blo-Chr7:21090604 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00605 K05863 - egr:104454664 655.981