Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00639 ATGGAAAGTGCTTCTAAGAAAACCCATACGCCTCGCCAATCTTTTTACAATTCCCGCCATGTGAGCCCTCTTAGTAGTCTCAGACACTGCCGTAGCTCCAGCGGAGGAGGGCGATTAACCTCCATTGAAACCGCCCTGGATGACCTCTCAAACCGAAATAAAGAGAATGCGGAACCCAACAAGAAGGAAACTGAGAGTTGTTTGTTCGTGGGAAAGGAAAACGTGTTTCCCTCCGATGGAGTTTCTGCTAAGCCCAAGACGATTTCTGATTTCAAGTCTTTCTCGACGGGAAGCGCGTTGAAGCCATCCTCCCTTCAGCTCTGCATGGAAATCAACGAGCCTGAGAAGGTTTTCGGGTCTAAGTTATTGAACACGACGGACTCAGAACACTCGGCCACTTTGAAGATTTGGGACTATTCCGACTCAGAGGCGGCTCCTGCGTCGTCCTGGTCCACTTTACCGAACAGGTCGTTGCTGTGTCGGCCATTGCCTTTGGATATCGGAAAATGTACTTGTGTTATAGTCAAGGAAGCTTTACTAGATGGCATCCATGGCGGCGCTCTCTATTCCCTTTACACCAATGAAGGACAGGGACGACAGGACCGGAAATTAGCTGTTGCCCGCCATAAACGACATAATGGAAAGTCCGGTTTCACCATAGCCCAGAACATTAAAGGGATATCACCTAAGGATGATGATAGTTTCATAGGATCCATTACTTCTAATCTCATGGGTTCCAAATATCATATATGGGATCAGGGGAGTCGTGCAAAATTCCCAAGCACCCAATCTAAATCCCTTCTGGCTGTTGTTACATTTGTGCCAACAATCACCACCTGGACAGGAAGCCATAGAAGCATGAGAGCTTACGTACCAAAACATCAATCAATGCAGCTAAAAAACACGACCCAAGCGCAACACATTGCTGGGCTGCCAGAGGGGTGGGAAGAACAAAAAGAGAAAGTCCATCAGCTCTTTTCAAAAGTTCCTCTCTACAACAAGGCAAGAGAGTATAGTGATTTGTTAAAAATTGCAAAAATTATGCTTCTTCTCGTTGATCGTTGTCGATTACTTTCTCAGATTTCAAAACAATATGAGTTGGACTTCAGAGACAATGGTAGAGCAGGACTTCAAATCCTGAGCTCAGTCAAAAATTTTCAGCTGAAGATGGAGAAAAATGGAAAGCAGATAATCCTGCAGCTTGGAAGAGTCGGGAAGTCAAAATACGTGATGGACTACAGGTATAGGGTTGAAGAGAGTGATCGATCTTACATTTCATGCAGATATCCTCTGACGGGTTACCAAGCATTCTGCATTTGTTTGGCTTCCATAGATTCCAAGCTTTGTTGCACAGTGTAA 1359 45.18 MESASKKTHTPRQSFYNSRHVSPLSSLRHCRSSSGGGRLTSIETALDDLSNRNKENAEPNKKETESCLFVGKENVFPSDGVSAKPKTISDFKSFSTGSALKPSSLQLCMEINEPEKVFGSKLLNTTDSEHSATLKIWDYSDSEAAPASSWSTLPNRSLLCRPLPLDIGKCTCVIVKEALLDGIHGGALYSLYTNEGQGRQDRKLAVARHKRHNGKSGFTIAQNIKGISPKDDDSFIGSITSNLMGSKYHIWDQGSRAKFPSTQSKSLLAVVTFVPTITTWTGSHRSMRAYVPKHQSMQLKNTTQAQHIAGLPEGWEEQKEKVHQLFSKVPLYNKAREYSDLLKIAKIMLLLVDRCRLLSQISKQYELDFRDNGRAGLQILSSVKNFQLKMEKNGKQIILQLGRVGKSKYVMDYRYRVEESDRSYISCRYPLTGYQAFCICLASIDSKLCCTV 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29392581 29394506 - BLOR17222 Blo06g00639 61932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00639 452 PANTHER TUBBY-LIKE PROTEIN 8 4 450 - -
Blo06g00639 452 MobiDBLite consensus disorder prediction 48 64 - -
Blo06g00639 452 PANTHER TUBBY-RELATED 4 450 - -
Blo06g00639 452 Gene3D Tubby Protein; Chain A 155 445 IPR025659 -
Blo06g00639 452 MobiDBLite consensus disorder prediction 8 47 - -
Blo06g00639 452 MobiDBLite consensus disorder prediction 1 64 - -
Blo06g00639 452 PRINTS Tubby superfamily signature 235 259 IPR000007 -
Blo06g00639 452 PRINTS Tubby superfamily signature 429 451 IPR000007 -
Blo06g00639 452 PRINTS Tubby superfamily signature 374 390 IPR000007 -
Blo06g00639 452 Pfam Tub family 160 446 IPR000007 -
Blo06g00639 452 SUPERFAMILY Tubby C-terminal domain-like 147 451 IPR025659 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00639 Blo-Chr6:29392581 Blo01g00087 Blo-Chr1:1170475 2.49E-12 dispersed
Blo06g00639 Blo-Chr6:29392581 Blo02g00865 Blo-Chr2:33067374 5.21E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12488 PF01167 Tub 4.00E-33 CL0395 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00639 K19600 - csv:101216780 542.732