Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00645 ATGTTCTCAACAGAGCCACCACAGGGATCTTCGTCGTCTCCTGCGCGGTACGTGTTACCGAAGAAAAGCATCCGGGTTTTCGGGTTCGACACCATTTACCCTTACATTAGGCTGAGATTGCTCCGAAGTTGCTCGTCGTTAGCTCCAGTCGTGTACGTACCGCCGTTGGATGATTTGGATTCTAATTTGTCTGTGTCTTCCGCTACTCAAGGAATGAACAAGTGTAGATTTAATGTGATGGAAGGATTACCCTTCACAGGTCGTGCAAAGAAAAATCCTTCAAAGTCTTTTAGGAAAGGAGTGAAGAAGGGATCAGATGGAATAATGATGTTTGGCCGAACACTTCGTTCTGGCGTCACTCGTGCTGTCTTCCCAGAAGATCTTAAAGTTTCTGAGAAAAAAATATTTGATCCTCAAGACAAATCACTCCTATTTTGGAACAAGCTGTTTGTCGTATCTTGCATTCTTTCAGTGTCGGTCGATCCTTTGTTTTTTTATCTTCCTGTCTTTAATCATGCATCATATTGCCTTGGTATGGATACAAAGTTAGCCGTCACAACAACTACATTTCGGACAGTTTTTGATGTCTTCTACCTTCTCAGAATGGGTTTTCAGTTCCGCACTGCTTTTATTGCACCGTCTTCTCGGGTATTTGGACGAGGTGAACTTGTTATAGATCCTGCCGAGATAGCCAAGCGTTACCTGCAGCGCTATTTCATTATCGATTTGCTTTCTATCCTGCCTCTACCACAGGTTGTGGTGTGGAAGTTTCTTCAAAGATCGAAAGGCTCAGAGGTGTTGTCTACAAAAAAGGCATTGCTGAACATTGTATTTCTCCAATATATTCCAAGATTCACCCGCTTTATCCCTTTAAATATAGAGCTTAAAAAGACGGTTGGTGTGTTTGCTGAAAGTGCTTGGGCAGGGGCTGCTTACTATTTGCTGCTATATATGCTTGCTAGTCACATTGCTGGCTCATTTTGGTACTTACTAGCAGTGGAAAGAAATGAATTTTGCTGGAGACATGCATGCATTAGTAGTGGGAGATGTAACATAAATTATTTGTACTGCGGCAACAGACACATGGAAGGTTATGTTGATTGGAAAAACATGAGCGAGAGTATTCTAAGAGGCAAGTGCTCGCCCCAAGGTGGAGGGCCATTCAATTACGGGATCTACACACTTGCTATATCTTCTGGTATTGTTATATCCAGGAGCTTTTTCCCCAAGTTCTGCTACTGCTTGTGGTGGGGCTTGCAAAACTTGAGTACACTTGGTCAGGGGCTCCAAACTAGTACATACCCGGGCGAAGTTATATTTTCAATTTCTATAGCAATTTCTGGACTTCTCCTCTTTGCTCTTCTTATAGGCAATATGCAAACTTACCTTCAATCTCTCACGGTTCGTCTTGAGGAGATGAGGATCAAAAGGAGGGACTCGGAGCAGTGGATGCATCATCGGTTGCTTCCACAAGAATTGAGGGAGAGAGTTAGACGATATGATCTCTACAAATGGTTGGAAACACGTGGGGTCGATGAAGAGAGCATCGTCCAAAGTCTGCCTAAAGATCTGAGGAGAGATATCAAAAGGCACCTTTGTTTGAATTTAGTCAGAAGAGTTCCTCTGTTTGCTAACATGGATGAGAGATTGTTAGATGCCATATGTGAGCGACTGAAACCGAGTTTGTATACAGAGAGTACGTACATCGTCAGGGAAGGAGACCCGGTTAATGAGATGATGTTCATTATACGAGGCCGCCTAGAAAGTGTAACAACAGATGGAGGGAGAAGTGGATTTTTCAATCGAGGGGTGCTGAAAGAAGGCGATTTCTGTGGAGAAGAGCTCCTAACATGGGCACTTGACCCCAAAGCTGGAGCCAATTTACCATCATCTACTCGAACAGTGCATGCTCTAACTGAACAATGGAGGACATGGGCTGCATGCTTTATTCAGACCGCATGGAGACGGTATGGCAGGCGGAAAATAGCTGAACAAAGACGCAAAGAAGAGGAGGAAGAATTCGACGAAGAGGAAGAAGACAAGTATGGCAGCGGAAAACCTTTAGTCAGGCGTAATTTTAGTTCATCAAGGCTTGGAGCAACCATTCTGGCATCTCGTTTTGCAGCAAATGCTCTGCGTGGTCACAGGCTTCGAAACCCGAGCATAAAAGGGTTGGTGAACCTGCAAAAGCCTCCAGAGCCAGACTTCTCTATCTACGAGGCAGATTAG 2229 44.24 MFSTEPPQGSSSSPARYVLPKKSIRVFGFDTIYPYIRLRLLRSCSSLAPVVYVPPLDDLDSNLSVSSATQGMNKCRFNVMEGLPFTGRAKKNPSKSFRKGVKKGSDGIMMFGRTLRSGVTRAVFPEDLKVSEKKIFDPQDKSLLFWNKLFVVSCILSVSVDPLFFYLPVFNHASYCLGMDTKLAVTTTTFRTVFDVFYLLRMGFQFRTAFIAPSSRVFGRGELVIDPAEIAKRYLQRYFIIDLLSILPLPQVVVWKFLQRSKGSEVLSTKKALLNIVFLQYIPRFTRFIPLNIELKKTVGVFAESAWAGAAYYLLLYMLASHIAGSFWYLLAVERNEFCWRHACISSGRCNINYLYCGNRHMEGYVDWKNMSESILRGKCSPQGGGPFNYGIYTLAISSGIVISRSFFPKFCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSISIAISGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPQELRERVRRYDLYKWLETRGVDEESIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGVLKEGDFCGEELLTWALDPKAGANLPSSTRTVHALTEQWRTWAACFIQTAWRRYGRRKIAEQRRKEEEEEFDEEEEDKYGSGKPLVRRNFSSSRLGATILASRFAANALRGHRLRNPSIKGLVNLQKPPEPDFSIYEAD 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29437398 29441549 + BLOR17228 Blo06g00645 61938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00645 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 640 739 - -
Blo06g00645 742 SUPERFAMILY Voltage-gated potassium channels 138 464 - -
Blo06g00645 742 Gene3D Helix hairpin bin 470 533 - -
Blo06g00645 742 CDD CAP_ED 542 640 IPR000595 -
Blo06g00645 742 SMART cnmp_10 542 668 IPR000595 -
Blo06g00645 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 640 739 - -
Blo06g00645 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 51 640 - -
Blo06g00645 742 ProSiteProfiles cAMP/cGMP binding motif profile. 542 624 IPR000595 -
Blo06g00645 742 Coils Coil 660 680 - -
Blo06g00645 742 Gene3D - 150 467 - -
Blo06g00645 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 51 640 - -
Blo06g00645 742 MobiDBLite consensus disorder prediction 665 686 - -
Blo06g00645 742 SUPERFAMILY cAMP-binding domain-like 472 617 IPR018490 -
Blo06g00645 742 Pfam Ion transport protein 145 469 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo06g00645 742 Gene3D Jelly Rolls 540 649 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00645 Blo-Chr6:29437398 Blo14g00599 Blo-Chr14:10325640 0 dispersed
Blo06g00645 Blo-Chr6:29437398 Blo06g01081 Blo-Chr6:34137623 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00645 K05391 - csv:101221166 1074.69