Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00647 ATGGCTGCCACTGGGTCTACTCCAGGGCAGCAGCAATTCATTGCGAGCACTGGAAACAGAAGTTTTTCTAATGTGCCGTTGATTGAGAACTCAGATACTGATCAGATTGTTGTTCCTGACAGGAAAAGCTGGAGAAATCTATTTGCTTACATGGGACCCGGATTTCTCGTTTCGATCGCCTACATCGACCCTGGAAATTTCGAAACCGATTTACAGTCAGGGGCACAATACAAATACGAGCTACTTTGGATCATACTAGTGGCTTCATGTGCTGCTCTTGTAATTCAGTCATTGGCTGCCAATCTTGGAGTTGTTACAGGAAAGCATTTAGCAGAGCACTGCCGAGCTGAATACCCTCGCGTTCCCAACTACATCCTTTGGGTTCTGGCCGAAATTTCAATAGTTGCATGTGACATTCCCGAGGTCATAGGAACAGCTTTTGCTTTGAACATGCTCTTTAAAATTCCCGTTTGGGCCGGGGTTCTTCTGACTGGACTGAGCACATTGATGCTTCTAGCATTACAGCAATATGGGGTCAGGAAGCTCGAGTTCTTGATAGCATTTCTCGTACTTACAATTGCCGTTTGCTTCTTTATCGAGCTCGGCTATGCCAAGCCGGTCGCTTCGGAAGTTCTCTACGGGCTTTTCGTCCCTCAGCTCAAAGGAAATGGCGCTACTGGTCTTGCCATTTCTCTTCTTGGTGCTATGGTTATGCCGCACAATCTCTTCCTTCACTCGGCCTTGGTTCTGTCCCGGCAGATTCCACGATCTGTTCGTGGTATCAAGGAAGCTTGTCGATTTTACTTAATAGAGAGTGCCTTTGCTCTCATGATCGCCTTCCTTATAAACGTGTCGGTTATTTCCGTGAGTGGTGCGGTTTGTAATTCACGAGATTTAAATGCAGAAGACGGGAAGAGCTGCAAAGACTTGGACTTGAACTCGGCCTCCTTTTTACTGAGAAATGTGTTGGGTAGTTGGAGCTCAAAGCTTTTTGCAGTTGCTTTGTTGGCATCTGGCCAAAGTTCTACCATTACAGGCACTTATGCAGGCCAATATGTAATGCAGGGATTTCTCGATTTACGATTGAAGCCATGGCTCCGGAACTTTCTAACTCGATGTTTGGCAATAGTCCCTAGTCTGGTTGTTGCTATCATTGGCGGTTCTGCCGGAGCTGGGAGGCTGATTATAATTGCATCGATGATTTTGTCATTTGAGCTACCCTTCGCCCTTGTTCCTCTTCTCAAATTCACCAGCAGCAAGGCCAAGATGGGGATGTATGCAAATTCGATTGGGATATCAGCTGTTACCTGGATAGTCGGTTTCCTAATCATGGCCATCAACATATACTATCTAGTTTCAGGCTTTGTTGGTCTTCTTTTTCACAGAAATTTAGGTATTTTGGCCGTTGTCCTCCTCGGGATAACTGGATTCTCTGCCATCGGTCTGTATTTGGCTGGAATTGCATATTTGGTTTTGCGAAAAAACAAAGTCAAAGAAGCCACTCATCTTCTATCCTTGACAATGCCCGAAAGTCAGCTAGCAGCCGATGCAGCCGGTGATGGTGCAATACCTTGTCTCCCCAGAGAGGACATTGTCTGCATGCAATTGCCTCACAGAAGTAGCACAGCCGATGTGGACTGA 1641 46.19 MAATGSTPGQQQFIASTGNRSFSNVPLIENSDTDQIVVPDRKSWRNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRAEYPRVPNYILWVLAEISIVACDIPEVIGTAFALNMLFKIPVWAGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVLTIAVCFFIELGYAKPVASEVLYGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRQIPRSVRGIKEACRFYLIESAFALMIAFLINVSVISVSGAVCNSRDLNAEDGKSCKDLDLNSASFLLRNVLGSWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLVVAIIGGSAGAGRLIIIASMILSFELPFALVPLLKFTSSKAKMGMYANSIGISAVTWIVGFLIMAINIYYLVSGFVGLLFHRNLGILAVVLLGITGFSAIGLYLAGIAYLVLRKNKVKEATHLLSLTMPESQLAADAAGDGAIPCLPREDIVCMQLPHRSSTADVD 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29455010 29458736 + BLOR17230 Blo06g00647 61940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00647 546 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 45 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PANTHER METAL TRANSPORTER NRAMP1 8 546 - -
Blo06g00647 546 Hamap Divalent metal cation transporter MntH [mntH]. 31 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 8 546 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo06g00647 546 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00647 Blo-Chr6:29455010 Blo12g00978 Blo-Chr12:27826943 8.63E-109 dispersed
Blo01g01303 Blo-Chr1:49945022 Blo06g00647 Blo-Chr6:29455010 6.98E-128 transposed
Blo16g00314 Blo-Chr16:7964685 Blo06g00647 Blo-Chr6:29455010 0 transposed
Blo05g00159 Blo-Chr5:1436798 Blo06g00647 Blo-Chr6:29455010 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00647 K21398 - mnt:21396684 865.914