Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00707 ATGTCCTGCAAGGAAGGTCAAAAAATAGGACTGGATAATGGTAAATATGTGAGGTACACACCTGAGCAGGTCGAAGCCCTTGAGAGGCTCTATCATGACTGTCCCAAACCCAGTTCGATTCGTCGCCAGCAGCTCATCAGAGATTGCCCCATTCTCTCCAACATTGAGCCTAAGCAAATCAAAGTCTGGTTTCAAAACCGACGATGCAGAGAGAAGCAGAGGAAAGAAGCGTCAAGACTTCAAGCTGTCAATAGGAAGCTTACGGCAATGAATAAGCTCTTAATGGAGGAGAATGAACGGTTGCAGAAGCAGGTTTCGCAGCTGGTATACGAAAACGGATACTTCCGGCAGCACACCCAGAGTGCGACTCTTGCAAACAAAGACACTAGTGAAGCTGTGATGGCTAGTGGTCCGCACAATTTGACAACTCAGCATCCGCCAAGAGATGCTAGTCCTGCAGGGCTCTTGTCCATTGCAGAAGAAACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTAGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGTACTGGAGTGGCAGCACGAGCCTGCGGTCTGGTTGGCCTGGAGCCTACTAGGGTTGCAGAAATCCTTAAGGATCGGCCATCGTGGTTTCGCGATTGTCGAGCTGTGGATGTACTTAACGTACTGCCAACTGCAAATGGTGGAACCATTGAGTTGCTTTATATGCAGATGTATGCCCCAACAACATTGGCACCTGCTCGTGATTTCTGGTTGCTTCGCTACACTTCTGTTTTAGAAGATGGCAGCCTTGTGGTCTGTGAAAGATCACTTAAGAATACTCGGAATGGTCCAACTATGCCTTCAGTGCAGCATTTTGTCAGAGCGGAGATGCTCCCAAGTGGGTATCTGATTCGACCGTGTGAAGGAGGCGGCTCAATTATACACATTGTGGATCATATAGATTTGGAGCCTTGGAGTGTACCAGAAGTGTTGCGACCCTTGTATGAATCATCAACTATTCTTGCCCAAAAGACAACAATGGCGGCTCTACGCCAGTTGAGGCAGATTGCCCATGAGGTTTCCCAGTCTAATGTAACAGGGTGGGGTAGACGACCGGCAGCCCTTCGCTCTCTTATTCAGAGATTGACAAGGGGTTTTAATGAAGCACTTAATGGGTTTACTGATGAGGGATGGTCAGTGATCGGAAGTGATGGCATGGATGATGTTACTATCCTTGTGAACTCATCTCCCGAAAAACTAATGGGTTTAAATCTTTCATTTGCAAATGGATTTTCTGCTGTCAGCAATGCAGTCTTATGTGCCAAAGCATCGATGCTATTGCAGAATGTACCTCCTGCAATCCTTCTTCGGTTTCTACGGGAGCACCGGTCAGAATGGGCAGACATCAATATAGATGCTTACTCAGCTGCAGCTATCAAGGTTGGGCCATGCAGTTTACCAGGGACTCGAGTTGCAAGTTTTGGAAGTCAAGTAATACTTCCATTGGCTCACACTATTGAACATGAAGAGTGCATGGAGGTCATCAAGCTGGAAGGTGTTGGCCATTCTCCTGAAGAGGCGATGTTGCCAAGGGAAATGTTTCTCTTGCAACTCTGCAGTGGGATGGATGAAAGTGCTGTTGGCACCTGTGCAGAACTAATATTTGCTCCAATTGATGCGTCTTTCGCTGATGATGCACCTCTTTTACCATCAGGATTTCGCATTATACCTCTTGATTCAGGGAAGGAGGCATCTAGTCCAAATCGCACCCTAGACCTTGCTTCTGCTCTTGAAATTGGGGCTGCTGGAAACAGAGCACTGAATGATTGCTCTGTGAATACTGGGTGTACAAGGTCTGTGATGACAATAGCGTTTGAATTTGCATTCGAGAACCACATGCAAGAACATGTAGTCTCAATGGCTCGGCAATATGTACGGAACATCATATCATCGGTTCAGAGGGTAGCGCTAGCTCTTTCTCCTCATTTGAATTCACCAGCTGGTCTTAGGCCTCCACTCGGCACTCCTGAAGCACAGACCCTTGCTAAATGGATCTGCAACAGTCACAGGGCTTACTTGGGTGTTGATTTGCTGAAATCTGGAAATGAAGGGAGCGACTATATTCTCAAAGCGTTGTGGCATCAGTCGGATGCAATCATGTGCTGCTCTCTTAAGAAATCGATTATAATCATATTTATCCTAGTTGATCGACGCGGTATTGATAATGATATCGGCTTAAATGCATTGCCAGTTTTTACTTTCGCAAACCAGGCGGGGCTAGACATGCTTGAAACCACCTTAGTTGCATTACAAGACATAACTTTAGAAAAGATATTTGATGATCACGGAAGGAAGTCTCTCTGCTCTGAGTTTCCACAGATAATGCAGCAGGGATTCACTTGCCTTCAAGGCGGTATATGCCTGTCGAGCATGGGCCGACCGATCTCCTACGAACGGGCAGTGGCTTGGAAAGTGGTGAACGAAGAAGAGACTGCTCACTGCATCTGCTTCATGTTTGTGAACTGGTCGTTTGTCTAA 2571 46.67 MSCKEGQKIGLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVYENGYFRQHTQSATLANKDTSEAVMASGPHNLTTQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQMYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTRNGPTMPSVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLEPWSVPEVLRPLYESSTILAQKTTMAALRQLRQIAHEVSQSNVTGWGRRPAALRSLIQRLTRGFNEALNGFTDEGWSVIGSDGMDDVTILVNSSPEKLMGLNLSFANGFSAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADINIDAYSAAAIKVGPCSLPGTRVASFGSQVILPLAHTIEHEECMEVIKLEGVGHSPEEAMLPREMFLLQLCSGMDESAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALEIGAAGNRALNDCSVNTGCTRSVMTIAFEFAFENHMQEHVVSMARQYVRNIISSVQRVALALSPHLNSPAGLRPPLGTPEAQTLAKWICNSHRAYLGVDLLKSGNEGSDYILKALWHQSDAIMCCSLKKSIIIIFILVDRRGIDNDIGLNALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKSLCSEFPQIMQQGFTCLQGGICLSSMGRPISYERAVAWKVVNEEETAHCICFMFVNWSFV 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30154632 30159759 + BLOR17290 Blo06g00707 62000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00707 856 SMART HOX_1 12 78 IPR001356 GO:0003677
Blo06g00707 856 CDD bZIP 67 106 - -
Blo06g00707 856 Gene3D - 10 81 - -
Blo06g00707 856 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 756 856 IPR044830 GO:0003700
Blo06g00707 856 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 752 IPR044830 GO:0003700
Blo06g00707 856 SUPERFAMILY Homeodomain-like 14 78 IPR009057 -
Blo06g00707 856 CDD homeodomain 15 75 IPR001356 GO:0003677
Blo06g00707 856 ProSiteProfiles 'Homeobox' domain profile. 10 74 IPR001356 GO:0003677
Blo06g00707 856 Coils Coil 70 111 - -
Blo06g00707 856 ProSiteProfiles START domain profile. 148 363 IPR002913 GO:0008289
Blo06g00707 856 Pfam MEKHLA domain 691 855 IPR013978 -
Blo06g00707 856 CDD START_ArGLABRA2_like 152 368 - -
Blo06g00707 856 Pfam Homeodomain 15 73 IPR001356 GO:0003677
Blo06g00707 856 Pfam START domain 158 366 IPR002913 GO:0008289
Blo06g00707 856 SUPERFAMILY Bet v1-like 157 368 - -
Blo06g00707 856 Gene3D - 192 376 IPR023393 -
Blo06g00707 856 PANTHER CLASS III HD-ZIP PROTEIN CNA1 756 856 - -
Blo06g00707 856 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 752 - -
Blo06g00707 856 SMART START_1 157 367 IPR002913 GO:0008289
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00080 Blo06g00707 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01778 Blo-Chr1:57493349 Blo06g00707 Blo-Chr6:30154632 0 dispersed
Blo06g00707 Blo-Chr6:30154632 Blo12g00752 Blo-Chr12:25868188 0 dispersed
Blo05g00080 Blo-Chr5:794850 Blo06g00707 Blo-Chr6:30154632 2.18E-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12493 PF01852 START 1.60E-54 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00707 K09338 - csv:101213106 1514.59