Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo06g00741 ATGGGTTTACAAGAAAACCTGCTCAGGGGCATTTATGCCTATGGGTTTGAGAAGCCGTCTGCAATCCAGCAAAGGGGAATTGTTCCTTTCTGCCAAGGTCTTGATGTGATTCAACAGGCTCAATCTGGCACTGGAAAAACTGCAACCTTTTGCTCAGGAATTTTGCAGCAACTTGATTATGGTTTAGTCCAGTGCCAGGCACTGGTTCTAGCACCCACCAGGGAACTGGCTCAACAGATTGAGAAGGTCATGCGAGCTCTAGGCGATTATCTTGGTGTCAAGGTTCATGCTTGTGTTGGAGGAACCATTGTACGTGAGGATCAACGAATTCTTCAAGCCGGGGTGCATGTTGTTGTTGGTACTCCTGGTCGAGTATTTGACATGTTGCAAAGGCAGTCTCTCCGCCCAGACTGCATTAAGATGTTTGTTTTGGATGAGGCTGATGAGATGCTTTCACGCGGATTCAAGGATCAGATATACGACATTTTCCAGCTTTTGCCATCAAAAGTTCAGGTTGGAGTTTTCTCTGCAACAATGCCACCTGAAGCTCTGGAAATCACGAGGAAGTTTATGAACAAGCCTGTAAGAATCTTGGTGAAGCGTGATGAACTTACTTTGGAAGGTATCAAGCAGTTCTATGTTGATGTTGACAAGGAAGATTGGAAACTTGACACGCTATGTGATCTTTATGAAACTTTGGCCATCACCCAGAGCGTCATCTTTGTCAACACACGTCGCAAGGTGGATTGGCTGACTGACAAGATGCGCAGTCGAGATCACACAGTATCAGCCACCCATGGAGACATGGACCAGAACACCAGAGATATAATTATGCGAGAATTCCGCTCTGGGTCTTCTCGTGTTCTCATAACGACCGATCTCCTGGCTCGTGGTATTGATGTCCAGCAAGTTTCGCTTGTTATAAACTACGATCTGCCAACACAACCAGAAAATTACCTTCATCGAATTGGTCGAAGTGGACGATTTGGAAGAAAAGGGGTGGCCATCAACTTCGTGACTAGTGATGATAGTAAAATGTTGTACGACATTCAGAAGTTCTACAACGTGATGATTGAGGAGCTGCCTGCTAATGTTGCTGATCTCCTGTGA 1110 45.59 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTIVREDQRILQAGVHVVVGTPGRVFDMLQRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVDVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDSKMLYDIQKFYNVMIEELPANVADLL 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30606618 30608062 - BLOR17324 Blo06g00741 62034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo06g00741 369 SMART ultradead3 15 212 IPR014001 -
Blo06g00741 369 PANTHER RNA HELICASE 1 369 - -
Blo06g00741 369 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 27 197 IPR014001 -
Blo06g00741 369 SMART helicmild6 249 330 IPR001650 -
Blo06g00741 369 Gene3D - 1 204 IPR027417 -
Blo06g00741 369 Gene3D - 205 369 IPR027417 -
Blo06g00741 369 CDD SF2_C_DEAD 209 339 - -
Blo06g00741 369 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 1 24 IPR014014 GO:0003724
Blo06g00741 369 CDD DEADc_EIF4A 1 198 - -
Blo06g00741 369 Pfam Helicase conserved C-terminal domain 222 330 IPR001650 -
Blo06g00741 369 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 208 369 IPR001650 -
Blo06g00741 369 PANTHER EUKARYOTIC INITIATION FACTOR 4A-2 1 369 - -
Blo06g00741 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 350 IPR027417 -
Blo06g00741 369 Pfam DEAD/DEAH box helicase 21 182 IPR011545 GO:0003676|GO:0005524
Blo06g00741 369 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 143 151 IPR000629 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00351 Blo-Chr2:3740960 Blo06g00741 Blo-Chr6:30606618 4.06E-89 dispersed
Blo06g00741 Blo-Chr6:30606618 Blo18g00276 Blo-Chr18:2930723 0 dispersed
Blo06g00740 Blo-Chr6:30604371 Blo06g00741 Blo-Chr6:30606618 7.69E-22 tandem
Blo06g00741 Blo-Chr6:30606618 Blo07g00769 Blo-Chr7:24850765 6.10E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo06g00741 K03257 - csv:101221456 715.687